==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 24-NOV-06 2JMO . COMPND 2 MOLECULE: PARKIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.A.BEASLEY,V.A.HRISTOVA,G.S.SHAW . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7455.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 6.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 77.8 -9.7 22.7 -23.4 2 2 A H + 0 0 167 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.829 360.0 89.8 -90.4 -38.7 -11.4 23.4 -20.1 3 3 A M + 0 0 141 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.032 42.2 135.4 -52.3 167.2 -13.6 26.3 -21.3 4 4 A G + 0 0 82 2,-0.0 2,-0.2 0, 0.0 0, 0.0 0.150 16.4 152.8 144.0 94.3 -17.1 25.5 -22.7 5 5 A E - 0 0 164 2,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.772 24.5-141.5-132.2 176.9 -20.3 27.3 -21.9 6 6 A E - 0 0 194 -2,-0.2 2,-0.3 3,-0.0 -2,-0.0 -0.966 9.1-163.2-141.9 156.8 -23.7 28.1 -23.5 7 7 A Q - 0 0 151 -2,-0.3 2,-0.5 0, 0.0 -2,-0.0 -0.856 47.4 -61.1-135.2 169.9 -26.2 31.0 -23.7 8 8 A Y - 0 0 201 -2,-0.3 3,-0.4 2,-0.1 2,-0.2 -0.337 62.5-169.3 -55.4 105.2 -29.8 31.6 -24.6 9 9 A N + 0 0 130 -2,-0.5 -1,-0.0 1,-0.2 -3,-0.0 -0.569 61.4 22.3 -97.5 163.0 -29.9 30.6 -28.2 10 10 A R S S+ 0 0 181 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.1 0.816 70.7 164.0 51.9 32.1 -32.7 31.1 -30.8 11 11 A Y + 0 0 161 -3,-0.4 2,-0.6 2,-0.0 5,-0.2 0.838 55.5 77.2 -47.1 -36.9 -33.8 34.0 -28.6 12 12 A Q + 0 0 176 3,-0.1 2,-0.3 2,-0.0 3,-0.1 -0.684 66.2 130.4 -82.4 120.1 -35.9 35.2 -31.5 13 13 A Q - 0 0 105 -2,-0.6 -2,-0.0 3,-0.1 -3,-0.0 -0.926 67.6 -96.4-156.0 177.4 -39.1 33.1 -32.0 14 14 A Y S S+ 0 0 236 -2,-0.3 -1,-0.1 1,-0.2 -2,-0.0 0.932 114.5 61.6 -69.0 -47.2 -42.8 33.3 -32.5 15 15 A G S S+ 0 0 79 -3,-0.1 -1,-0.2 2,-0.0 2,-0.1 0.908 94.1 71.9 -44.4 -54.2 -43.7 32.9 -28.8 16 16 A A S S- 0 0 47 -5,-0.2 2,-0.4 1,-0.0 -3,-0.1 -0.415 72.1-159.5 -68.1 138.8 -41.8 36.1 -27.9 17 17 A E + 0 0 164 -2,-0.1 2,-0.3 2,-0.0 -3,-0.1 -0.977 15.3 171.0-125.7 134.8 -43.5 39.3 -28.9 18 18 A E + 0 0 119 -2,-0.4 2,-0.5 0, 0.0 3,-0.1 -0.941 5.4 179.6-146.5 120.1 -42.0 42.7 -29.3 19 19 A C S S- 0 0 110 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.943 76.6 -20.4-125.7 110.7 -43.5 45.9 -30.8 20 20 A V S S+ 0 0 114 -2,-0.5 2,-0.5 1,-0.2 -1,-0.2 0.931 95.3 137.2 60.4 47.9 -41.5 49.1 -31.0 21 21 A L + 0 0 81 -3,-0.1 2,-0.3 2,-0.0 -1,-0.2 -0.892 22.3 110.5-130.6 102.6 -39.1 47.9 -28.3 22 22 A Q - 0 0 141 -2,-0.5 2,-0.2 -3,-0.1 -3,-0.0 -0.952 47.6-124.6-158.4 173.7 -35.4 48.6 -28.8 23 23 A M + 0 0 86 -2,-0.3 40,-0.2 41,-0.1 39,-0.1 -0.679 62.3 48.6-121.4 176.1 -32.4 50.6 -27.6 24 24 A G S S+ 0 0 22 38,-0.3 14,-0.1 -2,-0.2 16,-0.1 0.525 94.6 45.6 67.4 139.7 -29.8 53.0 -29.1 25 25 A G S S+ 0 0 69 1,-0.2 2,-0.2 14,-0.2 13,-0.1 0.872 82.8 147.3 63.9 37.7 -30.7 55.8 -31.4 26 26 A V - 0 0 11 11,-0.2 2,-0.3 13,-0.0 -1,-0.2 -0.684 33.0-151.9-104.7 159.3 -33.5 56.9 -29.1 27 27 A L - 0 0 101 -2,-0.2 9,-0.2 9,-0.1 7,-0.1 -0.801 40.3 -70.0-125.4 167.8 -34.9 60.4 -28.4 28 28 A C - 0 0 7 7,-1.6 4,-0.1 -2,-0.3 38,-0.0 -0.396 38.1-152.4 -61.0 116.4 -36.6 62.2 -25.5 29 29 A P + 0 0 84 0, 0.0 -1,-0.2 0, 0.0 5,-0.1 0.484 62.8 111.8 -69.7 -1.5 -40.1 60.7 -25.4 30 30 A R S S- 0 0 159 3,-0.2 2,-0.2 1,-0.1 5,-0.1 -0.370 81.6 -93.0 -74.6 153.8 -41.3 63.9 -23.8 31 31 A P S S- 0 0 111 0, 0.0 2,-1.6 0, 0.0 -1,-0.1 -0.478 102.5 -6.0 -69.8 130.3 -43.6 66.3 -25.8 32 32 A G S S+ 0 0 83 -2,-0.2 2,-0.9 1,-0.1 -4,-0.0 -0.306 107.1 102.3 83.2 -54.1 -41.8 69.0 -27.7 33 33 A C + 0 0 16 -2,-1.6 2,-0.3 1,-0.1 -3,-0.2 -0.513 48.2 179.3 -67.9 104.6 -38.4 68.1 -26.4 34 34 A G + 0 0 54 -2,-0.9 2,-1.0 -7,-0.1 -1,-0.1 -0.370 7.3 169.3-105.3 53.6 -36.9 66.1 -29.3 35 35 A A + 0 0 9 -2,-0.3 -7,-1.6 1,-0.2 -5,-0.1 -0.535 6.6 174.0 -69.7 102.0 -33.5 65.3 -27.8 36 36 A G + 0 0 58 -2,-1.0 2,-0.3 -9,-0.2 -1,-0.2 -0.019 22.9 146.3 -99.5 30.1 -32.1 62.8 -30.2 37 37 A L - 0 0 55 11,-0.2 -11,-0.2 1,-0.1 -2,-0.0 -0.521 59.1-109.9 -70.9 126.6 -28.7 62.7 -28.5 38 38 A L - 0 0 135 -2,-0.3 -1,-0.1 -13,-0.1 -11,-0.1 -0.399 37.3-135.3 -60.4 111.6 -27.1 59.2 -28.7 39 39 A P - 0 0 8 0, 0.0 -14,-0.2 0, 0.0 4,-0.1 -0.350 28.8 -88.6 -69.7 148.7 -27.2 57.8 -25.2 40 40 A E - 0 0 134 5,-0.2 -16,-0.1 2,-0.2 22,-0.1 -0.010 40.9-102.8 -52.0 160.6 -24.2 56.1 -23.7 41 41 A P S S+ 0 0 90 0, 0.0 2,-0.4 0, 0.0 -1,-0.2 0.363 109.3 68.1 -69.7 8.0 -23.8 52.3 -24.2 42 42 A D > - 0 0 77 3,-0.1 3,-1.2 1,-0.1 -2,-0.2 -0.929 64.8-160.8-135.5 110.4 -25.0 52.0 -20.6 43 43 A Q T 3 + 0 0 60 -2,-0.4 3,-0.4 1,-0.3 -1,-0.1 0.584 69.7 107.6 -63.1 -7.6 -28.6 52.8 -19.6 44 44 A R T 3 S- 0 0 164 1,-0.2 -1,-0.3 17,-0.1 2,-0.2 0.850 99.8 -5.5 -36.8 -47.6 -27.1 53.0 -16.1 45 45 A K S < S+ 0 0 129 -3,-1.2 2,-0.5 2,-0.0 -1,-0.2 -0.782 72.1 168.7-158.0 107.7 -27.5 56.8 -16.3 46 46 A V B -A 60 0A 5 14,-0.6 14,-2.0 -3,-0.4 2,-0.5 -0.958 13.5-163.7-127.2 115.2 -28.7 58.7 -19.4 47 47 A T > - 0 0 66 -2,-0.5 3,-0.7 12,-0.2 12,-0.1 -0.859 18.2-150.2-100.5 127.0 -29.6 62.4 -19.2 48 48 A C T 3 S+ 0 0 1 -2,-0.5 3,-0.3 10,-0.3 -11,-0.2 0.599 77.0 104.6 -66.8 -9.2 -31.6 63.9 -22.0 49 49 A E T 3 + 0 0 94 1,-0.2 2,-2.3 6,-0.1 6,-0.8 0.886 39.3 152.4 -34.4 -68.5 -29.7 67.0 -21.0 50 50 A G S < S- 0 0 61 -3,-0.7 -1,-0.2 1,-0.2 3,-0.1 -0.443 70.0 -79.4 70.5 -79.9 -27.3 66.9 -23.9 51 51 A G S S+ 0 0 61 -2,-2.3 -1,-0.2 1,-0.4 -2,-0.1 0.079 99.8 85.7 177.8 -47.8 -26.6 70.6 -24.1 52 52 A N S > S- 0 0 138 1,-0.1 2,-2.1 -3,-0.1 3,-1.2 -0.002 100.3 -78.4 -66.6 178.4 -29.3 72.6 -25.8 53 53 A G T 3 S+ 0 0 82 1,-0.2 -1,-0.1 -3,-0.1 -3,-0.1 -0.159 113.2 86.9 -75.5 46.4 -32.4 73.9 -24.1 54 54 A L T 3 + 0 0 62 -2,-2.1 -1,-0.2 -5,-0.5 -19,-0.1 0.670 48.0 123.8-113.3 -32.1 -34.0 70.4 -24.2 55 55 A G < - 0 0 33 -3,-1.2 -6,-0.1 -6,-0.8 -8,-0.0 -0.033 38.2-171.0 -35.3 122.2 -32.6 68.9 -21.0 56 56 A C - 0 0 60 2,-0.1 -1,-0.2 -23,-0.0 3,-0.1 0.807 34.1-125.9 -88.2 -36.7 -35.6 67.7 -19.0 57 57 A G S S+ 0 0 66 1,-0.2 2,-0.5 0, 0.0 -2,-0.1 0.332 79.4 98.4 107.0 -5.3 -33.5 66.9 -15.9 58 58 A F - 0 0 129 -9,-0.0 -10,-0.3 -12,-0.0 -1,-0.2 -0.949 67.0-137.9-121.0 114.0 -34.7 63.3 -15.6 59 59 A A - 0 0 14 -2,-0.5 9,-0.9 -12,-0.1 -12,-0.2 -0.243 20.7-155.6 -64.8 154.4 -32.6 60.5 -16.9 60 60 A F E -AB 46 67A 9 -14,-2.0 2,-0.8 7,-0.2 -14,-0.6 -0.710 24.0 -97.0-125.3 176.7 -34.3 57.6 -18.8 61 61 A C E >> - B 0 66A 0 5,-3.3 4,-1.1 -2,-0.2 5,-1.0 -0.867 23.4-166.1-102.2 109.0 -33.6 54.0 -19.6 62 62 A R T 45S+ 0 0 47 -2,-0.8 -38,-0.3 1,-0.2 -1,-0.2 0.781 86.5 66.2 -61.8 -26.9 -32.0 53.6 -23.1 63 63 A E T 45S+ 0 0 103 1,-0.2 -1,-0.2 -40,-0.2 -2,-0.0 0.942 123.6 13.2 -60.9 -50.4 -32.8 49.9 -22.9 64 64 A C T 45S- 0 0 4 -3,-0.4 -1,-0.2 2,-0.2 -2,-0.2 0.239 98.4-133.0-108.0 7.1 -36.5 50.4 -22.9 65 65 A K T <5S+ 0 0 66 -4,-1.1 -3,-0.2 1,-0.2 2,-0.2 0.798 71.7 111.4 44.2 32.0 -36.1 54.0 -23.9 66 66 A E E