==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-MAR-13 4JM1 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PARABACTEROIDES DISTASONIS; . AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5294.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 69.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 9 10.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 19.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 21.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A G 0 0 115 0, 0.0 4,-0.3 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0-165.4 23.2 11.8 7.2 2 26 A A > + 0 0 10 1,-0.2 4,-2.9 2,-0.1 5,-0.2 0.425 360.0 99.7 -99.2 -2.7 26.8 10.9 7.6 3 27 A D H > S+ 0 0 124 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.874 83.6 48.3 -58.5 -42.6 26.6 7.8 9.8 4 28 A K H > S+ 0 0 180 -3,-0.2 4,-0.9 2,-0.2 -1,-0.2 0.927 114.8 45.6 -66.6 -41.6 27.0 5.2 7.1 5 29 A Y H >> S+ 0 0 15 -4,-0.3 4,-2.1 2,-0.2 3,-1.0 0.950 113.5 49.0 -62.9 -48.3 30.0 7.1 5.6 6 30 A I H 3X S+ 0 0 16 -4,-2.9 4,-2.2 1,-0.3 -2,-0.2 0.911 109.4 53.1 -57.0 -44.8 31.6 7.6 9.1 7 31 A D H 3< S+ 0 0 124 -4,-2.6 -1,-0.3 -5,-0.2 -2,-0.2 0.692 110.2 49.0 -67.3 -17.5 31.1 3.9 9.8 8 32 A T H << S+ 0 0 98 -3,-1.0 -1,-0.2 -4,-0.9 -2,-0.2 0.819 116.0 39.3 -86.3 -36.8 32.9 2.9 6.6 9 33 A I H >X>S+ 0 0 3 -4,-2.1 3,-2.4 3,-0.1 4,-2.1 0.719 88.0 107.3 -86.1 -22.7 35.9 5.1 7.1 10 34 A T B 3<5S-a 14 0A 60 -4,-2.2 5,-0.2 1,-0.3 6,-0.1 -0.409 100.0 -0.5 -64.5 123.7 36.4 4.5 10.8 11 35 A G T 345S+ 0 0 68 3,-2.0 -1,-0.3 -2,-0.3 4,-0.2 0.613 128.3 73.6 70.7 9.1 39.4 2.3 11.3 12 36 A F T <45S- 0 0 167 -3,-2.4 -2,-0.2 2,-0.3 -3,-0.1 0.697 120.2 -4.5-109.9 -60.7 39.9 2.2 7.6 13 37 A S T <5S+ 0 0 47 -4,-2.1 2,-0.3 1,-0.1 -3,-0.2 0.307 137.7 16.9-120.3 1.4 41.2 5.6 6.6 14 38 A C B - 0 0 9 4,-2.6 3,-2.3 -2,-0.4 53,-0.2 -0.566 23.8-105.3-101.9 164.1 29.5 18.4 14.5 21 45 A D T 3 S+ 0 0 141 51,-2.5 52,-0.1 1,-0.3 -1,-0.1 0.803 117.8 60.3 -61.0 -28.0 26.5 20.6 15.2 22 46 A N T 3 S- 0 0 86 50,-0.4 -1,-0.3 2,-0.1 51,-0.1 0.355 122.5-101.6 -85.3 7.3 28.0 23.5 13.2 23 47 A G S < S+ 0 0 17 -3,-2.3 34,-2.8 1,-0.3 35,-0.6 0.527 76.9 127.3 93.4 8.9 28.1 21.3 10.1 24 48 A F E - c 0 58B 33 32,-0.2 -4,-2.6 33,-0.2 2,-0.7 -0.736 54.5-133.4 -96.5 149.3 31.7 20.1 9.8 25 49 A L E -Bc 19 59B 0 33,-2.4 35,-2.5 -2,-0.3 2,-0.5 -0.911 25.3-158.4 -96.8 116.2 33.0 16.6 9.3 26 50 A V E -Bc 18 60B 0 -8,-3.1 -8,-2.4 -2,-0.7 2,-0.5 -0.877 7.7-169.4-103.1 125.2 35.8 16.1 11.8 27 51 A I E -Bc 17 61B 0 33,-2.8 35,-2.3 -2,-0.5 2,-0.5 -0.984 8.1-153.0-122.4 123.7 38.3 13.3 11.1 28 52 A A E +Bc 16 62B 0 -12,-3.1 -13,-2.8 -2,-0.5 -12,-1.2 -0.852 19.2 176.6-102.3 125.8 40.9 12.2 13.6 29 53 A I E - c 0 63B 20 33,-2.4 35,-2.7 -2,-0.5 2,-1.8 -0.789 44.5-102.7-122.5 161.3 44.1 10.6 12.3 30 54 A D - 0 0 93 -2,-0.3 2,-0.2 33,-0.2 33,-0.1 -0.607 56.3-166.5 -82.3 79.0 47.4 9.3 13.8 31 55 A A - 0 0 5 -2,-1.8 34,-0.1 1,-0.1 32,-0.0 -0.455 31.0-164.2 -79.5 140.6 49.3 12.4 12.7 32 56 A D S S+ 0 0 155 -2,-0.2 2,-0.3 31,-0.0 -1,-0.1 0.611 80.1 43.2 -88.0 -17.0 53.0 12.8 12.7 33 57 A S S S- 0 0 66 2,-0.1 46,-0.1 1,-0.0 -2,-0.1 -0.833 73.6-132.3-129.3 163.7 52.8 16.6 12.4 34 58 A D S S+ 0 0 104 -2,-0.3 2,-0.3 2,-0.0 29,-0.1 0.243 87.4 16.3-104.4 13.7 50.7 19.4 14.0 35 59 A S S S+ 0 0 70 1,-0.0 45,-0.1 42,-0.0 44,-0.1 -0.964 84.4 72.1-166.5 167.8 49.8 21.2 10.8 36 60 A G + 0 0 70 -2,-0.3 3,-0.3 43,-0.2 44,-0.2 0.638 53.3 120.9 97.2 19.5 49.8 20.7 7.0 37 61 A Y > + 0 0 44 42,-2.7 4,-2.3 1,-0.2 43,-0.2 0.081 29.8 116.6-105.5 26.4 46.9 18.3 6.3 38 62 A D H > S+ 0 0 87 41,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.852 74.7 54.9 -62.1 -38.4 44.7 20.5 4.1 39 63 A X H > S+ 0 0 166 -3,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.913 108.3 48.9 -64.0 -39.4 45.1 18.2 1.0 40 64 A L H > S+ 0 0 60 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.935 109.6 52.9 -60.7 -44.2 43.9 15.2 3.1 41 65 A A H X S+ 0 0 0 -4,-2.3 4,-2.4 1,-0.2 41,-0.2 0.910 108.9 49.3 -58.6 -42.1 40.9 17.3 4.2 42 66 A S H X S+ 0 0 57 -4,-2.2 4,-2.4 39,-0.3 -1,-0.2 0.891 110.0 50.8 -68.5 -37.3 40.0 18.1 0.7 43 67 A Q H X S+ 0 0 125 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.918 111.5 47.6 -64.6 -43.4 40.2 14.5 -0.4 44 68 A F H X S+ 0 0 10 -4,-2.6 4,-2.9 2,-0.2 5,-0.2 0.888 110.4 52.5 -62.9 -41.2 38.0 13.4 2.4 45 69 A L H X S+ 0 0 9 -4,-2.4 4,-2.1 -5,-0.2 -2,-0.2 0.951 111.1 46.9 -61.7 -45.1 35.5 16.2 1.6 46 70 A E H X S+ 0 0 121 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.908 114.0 47.8 -61.3 -43.2 35.3 15.1 -2.0 47 71 A E H X S+ 0 0 80 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.919 109.1 52.5 -66.0 -43.9 34.9 11.5 -1.0 48 72 A A H <>S+ 0 0 0 -4,-2.9 5,-2.6 1,-0.2 -1,-0.2 0.924 113.0 45.3 -56.8 -47.0 32.2 12.2 1.6 49 73 A K H ><5S+ 0 0 114 -4,-2.1 3,-1.7 1,-0.2 -1,-0.2 0.892 109.6 54.9 -66.3 -38.4 30.2 14.1 -1.1 50 74 A K H 3<5S+ 0 0 162 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.851 106.9 51.8 -61.4 -33.2 30.8 11.4 -3.7 51 75 A E T 3<5S- 0 0 115 -4,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 0.298 128.1-101.2 -88.0 10.2 29.3 8.9 -1.2 52 76 A G T < 5 + 0 0 58 -3,-1.7 2,-0.7 1,-0.3 -3,-0.2 0.587 66.6 153.7 85.5 15.5 26.2 11.2 -0.8 53 77 A V < - 0 0 10 -5,-2.6 3,-0.3 -6,-0.2 -1,-0.3 -0.687 28.2-165.0 -75.9 118.5 26.9 13.0 2.4 54 78 A S + 0 0 104 -2,-0.7 -52,-0.0 1,-0.2 -5,-0.0 -0.604 53.1 31.0-104.5 159.1 25.1 16.3 2.0 55 79 A G + 0 0 68 1,-0.2 2,-0.3 -2,-0.2 -1,-0.2 0.521 70.0 151.5 81.4 8.9 25.2 19.6 3.9 56 80 A L - 0 0 12 -3,-0.3 -1,-0.2 1,-0.2 -32,-0.2 -0.576 35.0-161.6 -77.2 134.2 28.8 19.6 5.0 57 81 A K - 0 0 105 -34,-2.8 27,-2.2 -2,-0.3 2,-0.3 0.704 67.9 -59.3 -76.9 -23.2 30.5 23.0 5.4 58 82 A G E -cD 24 83B 0 -35,-0.6 -33,-2.4 25,-0.3 2,-0.4 -0.964 53.8 -83.4 167.5-178.9 33.8 21.3 5.2 59 83 A V E -cD 25 82B 0 23,-2.1 23,-2.0 -2,-0.3 2,-0.4 -0.965 30.5-163.1-116.1 138.8 36.2 18.7 6.6 60 84 A L E -cD 26 81B 14 -35,-2.5 -33,-2.8 -2,-0.4 2,-0.4 -0.983 8.3-148.9-119.0 132.0 38.5 19.3 9.6 61 85 A I E +cD 27 80B 0 19,-2.7 18,-2.2 -2,-0.4 19,-1.1 -0.864 20.7 174.4-100.2 132.2 41.5 17.1 10.4 62 86 A V E -cD 28 78B 1 -35,-2.3 -33,-2.4 -2,-0.4 2,-0.6 -0.883 36.2-102.8-128.4 162.7 42.5 16.6 14.0 63 87 A D E >> -c 29 0B 14 14,-0.5 4,-2.3 -2,-0.3 3,-2.0 -0.808 19.7-144.7 -86.7 123.4 45.1 14.4 15.7 64 88 A I T 34 S+ 0 0 46 -35,-2.7 -34,-0.1 -2,-0.6 -1,-0.1 0.781 99.0 63.4 -53.0 -27.9 43.6 11.4 17.4 65 89 A K T 34 S+ 0 0 113 -36,-0.4 -1,-0.3 1,-0.2 -35,-0.1 0.606 118.6 20.2 -76.3 -12.6 46.3 11.8 20.1 66 90 A N T <4 S+ 0 0 122 -3,-2.0 -2,-0.2 11,-0.1 -1,-0.2 0.570 96.5 102.8-126.8 -26.7 45.0 15.2 21.2 67 91 A A < - 0 0 19 -4,-2.3 2,-0.5 9,-0.1 9,-0.2 -0.388 52.7-150.6 -72.9 146.9 41.4 15.7 20.1 68 92 A K E -E 75 0C 65 7,-2.8 7,-2.7 -2,-0.1 2,-0.4 -0.949 8.7-152.7-119.5 110.8 38.4 15.4 22.5 69 93 A F E +E 74 0C 46 -2,-0.5 2,-0.2 5,-0.2 5,-0.2 -0.700 23.8 167.9 -83.0 129.6 35.2 14.2 20.9 70 94 A E E > -E 73 0C 119 3,-2.9 3,-1.0 -2,-0.4 2,-0.4 -0.776 50.0 -65.9-127.7 174.4 32.1 15.4 22.7 71 95 A Q T 3 S- 0 0 192 -2,-0.2 -51,-0.1 1,-0.2 3,-0.0 -0.515 121.1 -8.4 -66.6 118.9 28.3 15.4 21.8 72 96 A G T 3 S+ 0 0 11 -2,-0.4 -51,-2.5 -53,-0.2 -50,-0.4 0.434 129.5 59.2 78.7 0.0 28.0 17.8 18.8 73 97 A A E < -E 70 0C 41 -3,-1.0 -3,-2.9 -53,-0.2 2,-0.4 -0.990 60.2-145.9-156.6 154.3 31.7 19.1 18.9 74 98 A V E -E 69 0C 5 -2,-0.3 2,-0.5 -5,-0.2 -5,-0.2 -0.984 19.2-151.3-127.4 122.5 35.3 18.1 18.7 75 99 A V E +E 68 0C 76 -7,-2.7 -7,-2.8 -2,-0.4 2,-0.2 -0.771 48.3 68.9 -95.1 129.7 37.8 20.1 20.8 76 100 A G S S- 0 0 30 -2,-0.5 2,-0.1 -9,-0.2 -9,-0.1 -0.719 83.7 -46.0 148.3 169.5 41.5 20.4 19.6 77 101 A K - 0 0 123 -2,-0.2 2,-0.7 1,-0.1 -14,-0.5 -0.384 48.6-132.9 -66.3 131.5 43.8 21.9 17.1 78 102 A R E -D 62 0B 91 1,-0.1 -16,-0.2 -16,-0.1 3,-0.1 -0.806 21.6-174.8 -83.5 115.0 42.7 21.5 13.5 79 103 A I E + 0 0 9 -18,-2.2 -42,-2.7 -2,-0.7 2,-0.3 0.470 69.2 8.7 -91.5 -8.3 45.7 20.3 11.6 80 104 A G E -D 61 0B 3 -19,-1.1 -19,-2.7 -43,-0.2 2,-0.3 -0.950 66.5-173.9-164.2 157.6 44.1 20.5 8.2 81 105 A K E -D 60 0B 94 -2,-0.3 2,-0.3 -21,-0.2 -39,-0.3 -0.991 9.7-174.4-154.8 156.2 40.9 21.9 6.7 82 106 A A E -D 59 0B 14 -23,-2.0 -23,-2.1 -2,-0.3 2,-0.3 -0.948 16.9-145.8-152.6 134.6 38.9 22.1 3.5 83 107 A Y E D 58 0B 144 -2,-0.3 -25,-0.3 -25,-0.2 -26,-0.1 -0.760 360.0 360.0-104.3 150.7 35.7 24.1 2.8 84 108 A K 0 0 182 -27,-2.2 -1,-0.1 -2,-0.3 -27,-0.1 -0.134 360.0 360.0 -50.9 360.0 32.6 23.3 0.6