==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 23-JUL-01 1JN7 . COMPND 2 MOLECULE: U-SHAPED TRANSCRIPTIONAL COFACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR K.KOWALSKI,J.P.MACKAY . 36 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3484.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 44.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 8.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 101 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 -27.7 -12.4 -6.4 -8.0 2 2 A S + 0 0 91 1,-0.1 5,-0.1 3,-0.1 0, 0.0 -0.930 360.0 86.8-170.4-169.4 -10.2 -4.5 -10.4 3 3 A A S S+ 0 0 100 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.953 100.6 46.4 61.1 52.5 -9.7 -3.4 -14.1 4 4 A A S S- 0 0 84 2,-0.1 -1,-0.1 -3,-0.1 -2,-0.0 -0.080 122.9 -55.3-175.1 -70.4 -11.9 -0.3 -13.8 5 5 A E S S+ 0 0 176 0, 0.0 2,-0.3 0, 0.0 -3,-0.1 0.083 76.0 137.7 165.5 64.8 -11.4 1.9 -10.8 6 6 A V + 0 0 91 -5,-0.1 -3,-0.1 2,-0.0 -2,-0.1 -0.851 48.5 12.7-123.2 159.3 -11.8 0.2 -7.4 7 7 A M - 0 0 90 -2,-0.3 4,-0.1 -5,-0.1 -5,-0.0 0.141 51.2-159.7 64.3 172.0 -9.9 0.5 -4.1 8 8 A K S S- 0 0 137 2,-0.3 16,-0.1 12,-0.0 -2,-0.0 0.253 70.3 -11.9-147.2 -76.6 -7.3 3.2 -3.3 9 9 A K S S+ 0 0 44 15,-0.1 9,-3.3 14,-0.1 2,-0.3 -0.316 108.0 85.2-136.8 51.3 -4.8 2.5 -0.5 10 10 A Y E -A 17 0A 97 7,-0.3 2,-0.6 9,-0.1 -2,-0.3 -0.961 62.8-137.6-155.1 134.1 -6.0 -0.6 1.3 11 11 A C E >> -A 16 0A 7 5,-2.2 5,-0.9 -2,-0.3 4,-0.6 -0.832 8.7-170.5 -98.0 123.5 -5.6 -4.3 0.6 12 12 A S T 45S+ 0 0 77 -2,-0.6 -1,-0.1 3,-0.2 5,-0.0 0.728 90.4 51.4 -80.1 -23.3 -8.6 -6.5 1.1 13 13 A T T 45S+ 0 0 116 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.880 123.5 27.0 -80.1 -41.5 -6.5 -9.7 0.8 14 14 A C T 45S- 0 0 26 2,-0.1 -2,-0.2 0, 0.0 -1,-0.1 0.418 100.1-131.1 -99.9 -0.9 -3.9 -8.6 3.4 15 15 A D T <5 + 0 0 112 -4,-0.6 2,-0.2 1,-0.2 -3,-0.2 0.878 60.5 140.7 51.9 41.0 -6.4 -6.4 5.3 16 16 A I E < -A 11 0A 73 -5,-0.9 -5,-2.2 2,-0.0 2,-0.3 -0.721 40.7-145.0-111.7 162.7 -3.8 -3.7 5.3 17 17 A S E -A 10 0A 84 -7,-0.3 2,-0.4 -2,-0.2 -7,-0.3 -0.906 5.1-159.7-128.1 156.1 -4.0 0.1 4.8 18 18 A F - 0 0 36 -9,-3.3 3,-0.1 -2,-0.3 -9,-0.1 -0.998 14.9-158.6-138.7 132.1 -1.9 2.7 3.2 19 19 A N S S+ 0 0 138 -2,-0.4 2,-0.3 1,-0.1 3,-0.1 0.234 85.2 50.5 -91.1 13.5 -1.9 6.5 3.8 20 20 A Y S >> S- 0 0 141 -11,-0.1 3,-2.2 1,-0.1 4,-1.6 -0.915 73.7-138.6-155.0 123.7 -0.2 7.0 0.4 21 21 A V H 3> S+ 0 0 82 -2,-0.3 4,-1.6 1,-0.3 5,-0.1 0.791 107.7 63.6 -49.3 -29.2 -1.1 5.7 -3.1 22 22 A K H 3> S+ 0 0 140 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.844 101.9 48.7 -65.4 -34.0 2.6 5.2 -3.5 23 23 A T H <> S+ 0 0 49 -3,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.889 107.7 53.3 -73.3 -39.7 2.6 2.7 -0.7 24 24 A Y H X S+ 0 0 40 -4,-1.6 4,-1.4 1,-0.2 -2,-0.2 0.832 112.1 47.2 -63.6 -30.8 -0.4 0.8 -2.1 25 25 A L H X S+ 0 0 110 -4,-1.6 4,-2.3 -5,-0.2 5,-0.2 0.901 110.4 50.5 -75.6 -43.0 1.6 0.6 -5.4 26 26 A A H X S+ 0 0 54 -4,-2.1 4,-1.5 1,-0.2 5,-0.4 0.809 109.3 53.3 -64.5 -30.5 4.7 -0.6 -3.6 27 27 A H H X>S+ 0 0 20 -4,-2.1 4,-2.1 3,-0.2 5,-1.7 0.892 111.4 43.8 -72.2 -40.6 2.7 -3.2 -1.8 28 28 A K H <5S+ 0 0 118 -4,-1.4 -2,-0.2 3,-0.2 -1,-0.2 0.841 120.6 41.5 -72.4 -34.3 1.2 -4.6 -5.1 29 29 A Q H <5S+ 0 0 130 -4,-2.3 -2,-0.2 -5,-0.1 -1,-0.2 0.696 130.5 27.8 -85.2 -21.8 4.6 -4.5 -6.8 30 30 A F H ><5S+ 0 0 168 -4,-1.5 3,-0.6 -5,-0.2 -3,-0.2 0.822 132.2 30.7-104.2 -51.1 6.5 -5.8 -3.7 31 31 A Y T 3<5S+ 0 0 152 -4,-2.1 3,-0.3 -5,-0.4 -3,-0.2 0.952 132.5 32.7 -74.8 -52.6 4.0 -7.9 -1.8 32 32 A H T 3