==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 24-JUL-01 1JNJ . COMPND 2 MOLECULE: BETA2-MICROGLOBULIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.VERDONE,A.CORAZZA,P.VIGLINO,F.PETTIROSSI,S.GIORGETTI, . 100 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6999.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 62.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 32.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 22 22.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 4 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 192 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 165.1 -6.7 -23.0 -4.8 2 1 A I + 0 0 111 1,-0.1 2,-0.6 31,-0.0 30,-0.1 0.955 360.0 162.1 69.7 55.3 -3.6 -21.8 -2.9 3 2 A Q + 0 0 134 28,-0.1 2,-1.0 84,-0.0 -1,-0.1 -0.656 17.1 178.3-114.2 72.0 -5.1 -18.3 -2.4 4 3 A R B -A 32 0A 123 28,-0.8 28,-1.0 -2,-0.6 83,-0.2 -0.683 26.6-143.9 -76.2 104.5 -3.2 -16.5 0.4 5 4 A T - 0 0 95 -2,-1.0 2,-0.4 26,-0.2 24,-0.1 -0.355 23.1 -92.4 -70.7 147.4 -5.1 -13.1 0.4 6 5 A P - 0 0 15 0, 0.0 2,-0.8 0, 0.0 24,-0.2 -0.493 29.1-150.7 -66.0 119.6 -3.2 -9.8 1.1 7 6 A K E -B 29 0B 139 22,-2.7 22,-2.2 -2,-0.4 2,-0.3 -0.846 22.0-154.1 -85.9 108.6 -3.2 -8.7 4.7 8 7 A I E +B 28 0B 69 -2,-0.8 20,-0.2 20,-0.2 2,-0.2 -0.634 26.0 174.5 -85.3 142.3 -3.0 -4.9 4.4 9 8 A Q E +B 27 0B 42 18,-2.6 18,-0.8 -2,-0.3 2,-0.7 -0.715 12.0 179.2-140.7 88.5 -1.6 -2.6 7.1 10 9 A V E +B 26 0B 16 16,-0.2 2,-0.3 86,-0.2 16,-0.2 -0.849 16.6 165.3 -97.7 106.5 -1.6 0.9 5.5 11 10 A Y E -B 25 0B 88 14,-2.1 14,-2.5 -2,-0.7 2,-0.4 -0.809 41.5-114.0-123.7 158.8 -0.2 3.4 8.1 12 11 A S E -B 24 0B 25 -2,-0.3 12,-0.2 12,-0.2 86,-0.0 -0.801 21.3-169.1 -85.0 130.4 1.1 6.9 8.5 13 12 A R S S+ 0 0 174 10,-2.7 -1,-0.2 -2,-0.4 11,-0.1 0.912 74.2 31.6 -82.1 -51.7 4.8 6.9 9.4 14 13 A H S S- 0 0 83 9,-0.8 2,-0.6 1,-0.0 9,-0.2 -0.531 105.9 -81.1-102.5 166.2 5.0 10.7 10.2 15 14 A P - 0 0 78 0, 0.0 2,-0.2 0, 0.0 -1,-0.0 -0.639 53.6-117.2 -77.7 114.3 2.3 13.0 11.6 16 15 A A + 0 0 13 -2,-0.6 2,-0.3 84,-0.2 5,-0.1 -0.320 47.8 159.0 -61.0 118.3 0.1 14.0 8.6 17 16 A E - 0 0 102 3,-0.5 57,-0.1 -2,-0.2 5,-0.0 -0.994 42.2-110.3-144.1 132.7 0.2 17.8 8.0 18 17 A N S S+ 0 0 115 -2,-0.3 2,-1.5 1,-0.2 56,-0.2 -0.329 101.7 7.0 -64.3 141.4 -0.6 19.7 4.8 19 18 A G S S+ 0 0 59 1,-0.1 2,-1.8 -2,-0.0 -1,-0.2 -0.278 107.6 96.5 79.9 -49.6 2.4 21.3 3.0 20 19 A K S S- 0 0 128 -2,-1.5 -3,-0.5 53,-0.1 -1,-0.1 -0.552 85.2-130.1 -79.6 82.1 4.8 19.5 5.5 21 20 A S + 0 0 59 -2,-1.8 51,-0.2 51,-0.1 50,-0.1 -0.003 36.8 178.7 -40.6 126.9 5.6 16.6 3.3 22 21 A N - 0 0 7 49,-2.9 2,-0.3 -8,-0.1 -1,-0.1 0.109 27.4 -90.6-118.3-147.8 5.1 13.4 5.3 23 22 A F - 0 0 63 47,-0.2 -10,-2.7 -9,-0.2 -9,-0.8 -0.858 24.3-169.0-151.5 117.8 5.3 9.6 4.8 24 23 A L E -BC 12 69B 0 45,-2.4 45,-2.3 -2,-0.3 2,-0.6 -0.905 10.5-167.0-105.3 121.6 2.6 7.2 3.7 25 24 A N E -BC 11 68B 9 -14,-2.5 -14,-2.1 -2,-0.5 2,-0.6 -0.891 9.6-171.4-121.0 98.6 3.5 3.5 4.1 26 25 A a E -BC 10 67B 0 41,-1.7 41,-2.6 -2,-0.6 2,-0.4 -0.811 15.5-178.2 -79.8 122.8 1.3 0.9 2.4 27 26 A Y E -BC 9 66B 54 -18,-0.8 -18,-2.6 -2,-0.6 2,-0.4 -0.999 4.0-179.3-124.9 125.3 2.6 -2.4 3.8 28 27 A V E +BC 8 65B 0 37,-1.5 37,-1.5 -2,-0.4 2,-0.2 -0.975 14.1 144.9-123.8 139.1 1.1 -5.7 2.6 29 28 A S E +B 7 0B 15 -22,-2.2 -22,-2.7 -2,-0.4 2,-0.2 -0.850 37.4 68.5-154.3-172.1 2.0 -9.2 3.7 30 29 A G S S+ 0 0 23 1,-0.2 34,-0.1 -2,-0.2 -25,-0.1 -0.035 82.4 108.2 84.0 -31.7 0.8 -12.7 4.5 31 30 A F - 0 0 0 32,-0.4 -1,-0.2 -2,-0.2 32,-0.2 -0.146 52.8-145.3 -72.4 166.7 0.1 -13.3 0.8 32 31 A H B +A 4 0A 57 -28,-1.0 -28,-0.8 -3,-0.1 2,-0.2 -0.784 57.8 53.6-165.1 149.4 1.7 -15.5 -1.9 33 32 A P S S- 0 0 60 0, 0.0 53,-0.2 0, 0.0 30,-0.1 0.385 77.8-112.8 -87.3-160.0 2.5 -15.7 -4.8 34 33 A S S S+ 0 0 76 -2,-0.2 2,-1.6 1,-0.1 -3,-0.0 0.602 80.5 108.0 -74.0 -20.0 4.5 -12.7 -6.0 35 34 A D + 0 0 92 2,-0.0 51,-1.3 50,-0.0 2,-0.3 -0.473 45.2 134.7 -77.3 86.6 2.0 -11.1 -8.5 36 35 A I E -E 85 0C 26 -2,-1.6 2,-0.4 49,-0.2 49,-0.3 -0.981 36.5-159.1-135.2 148.1 0.8 -8.0 -6.7 37 36 A E E +E 84 0C 82 47,-1.1 47,-1.2 -2,-0.3 2,-0.2 -0.993 11.2 174.1-130.1 127.6 0.2 -4.3 -7.7 38 37 A V + 0 0 14 -2,-0.4 2,-0.4 45,-0.2 45,-0.1 -0.694 3.6 175.0-144.0 80.2 0.0 -1.3 -5.3 39 38 A D - 0 0 37 -2,-0.2 43,-2.8 7,-0.0 2,-0.3 -0.754 32.0-129.2 -82.1 128.3 -0.2 2.1 -7.0 40 39 A L E -FG 47 81D 0 7,-0.6 7,-2.6 -2,-0.4 2,-0.4 -0.695 35.6-176.9 -83.6 134.6 -0.7 4.9 -4.4 41 40 A L E -FG 46 80D 41 39,-2.6 39,-1.5 -2,-0.3 5,-0.2 -0.983 14.4-167.8-151.3 114.5 -3.6 6.9 -5.7 42 41 A K - 0 0 24 3,-2.5 37,-0.1 -2,-0.4 -1,-0.1 0.525 66.9 -43.0 -81.9-133.1 -5.2 10.1 -4.3 43 42 A N S S- 0 0 131 1,-0.1 3,-0.1 36,-0.0 36,-0.1 0.887 129.0 -33.8 -65.1 -40.4 -8.6 11.6 -5.3 44 43 A G S S+ 0 0 63 1,-0.1 2,-0.4 0, 0.0 -1,-0.1 0.064 116.9 101.6-173.1 40.2 -7.7 10.8 -9.0 45 44 A E - 0 0 108 2,-0.0 -3,-2.5 0, 0.0 2,-0.4 -0.980 60.1-139.7-137.4 118.3 -3.9 11.3 -9.2 46 45 A R E -F 41 0D 131 -2,-0.4 2,-0.9 -5,-0.2 -5,-0.2 -0.651 14.1-135.6 -80.6 131.9 -1.4 8.4 -9.2 47 46 A I E +F 40 0D 20 -7,-2.6 -7,-0.6 -2,-0.4 -1,-0.0 -0.801 23.5 179.1 -89.3 101.9 1.8 8.9 -7.1 48 47 A E + 0 0 168 -2,-0.9 2,-1.9 1,-0.2 -1,-0.2 0.693 63.1 88.1 -76.2 -22.0 4.6 7.6 -9.4 49 48 A K + 0 0 155 -3,-0.1 2,-0.4 21,-0.0 21,-0.4 -0.527 59.7 149.2 -81.9 73.4 7.2 8.6 -6.8 50 49 A V - 0 0 62 -2,-1.9 2,-0.3 19,-0.1 19,-0.2 -0.935 26.1-171.4-108.6 130.5 7.1 5.2 -4.9 51 50 A E E -D 68 0B 132 17,-2.8 17,-1.5 -2,-0.4 2,-0.3 -0.770 12.2-160.5-106.8 161.3 10.1 3.7 -3.1 52 51 A H E -D 67 0B 97 -2,-0.3 15,-0.2 15,-0.2 3,-0.1 -0.861 33.2-131.1-133.0 170.4 10.0 0.2 -1.6 53 52 A S - 0 0 62 13,-2.0 14,-0.1 -2,-0.3 -1,-0.0 0.035 63.2-120.3-102.5 19.3 11.7 -2.1 0.9 54 53 A D - 0 0 98 12,-0.4 2,-0.6 1,-0.1 12,-0.5 0.243 46.3 -43.3 66.3 170.7 11.9 -4.7 -1.9 55 54 A L + 0 0 74 10,-0.1 2,-0.5 -3,-0.1 10,-0.2 -0.630 59.5 173.5 -72.4 115.7 10.4 -8.3 -1.9 56 55 A S + 0 0 53 8,-2.3 7,-0.1 -2,-0.6 8,-0.1 -0.899 10.7 175.8-123.2 95.0 11.1 -9.8 1.5 57 56 A F > > - 0 0 75 -2,-0.5 3,-1.4 6,-0.2 5,-0.7 0.192 47.9-121.9 -85.6 18.4 9.3 -13.2 1.7 58 57 A S T 3 5 - 0 0 54 1,-0.3 3,-0.1 6,-0.1 5,-0.1 0.624 41.0-103.6 52.8 19.3 10.9 -13.7 5.2 59 58 A K T 3 5S+ 0 0 160 1,-0.1 -1,-0.3 3,-0.1 4,-0.0 0.680 103.9 91.8 21.7 41.7 12.3 -16.9 3.5 60 59 A D T < 5S- 0 0 106 -3,-1.4 -1,-0.1 2,-0.0 -2,-0.1 0.487 107.2 -59.6-108.4-109.7 9.7 -18.8 5.5 61 60 A W T 5S+ 0 0 225 -3,-0.1 2,-0.2 2,-0.0 -3,-0.1 -0.466 106.6 77.0-143.7 60.5 6.2 -19.5 3.9 62 61 A S < - 0 0 26 -5,-0.7 2,-0.2 2,-0.0 -30,-0.1 -0.742 60.4-143.5-147.4-168.3 4.9 -16.0 3.2 63 62 A F + 0 0 42 -2,-0.2 -32,-0.4 -32,-0.2 2,-0.3 -0.814 30.9 141.8-169.5 124.9 5.5 -13.2 0.7 64 63 A Y - 0 0 55 -2,-0.2 -8,-2.3 -35,-0.2 2,-0.3 -0.984 22.8-169.5-162.6 173.8 5.6 -9.4 1.2 65 64 A L E -C 28 0B 25 -37,-1.5 -37,-1.5 -2,-0.3 2,-0.4 -0.946 24.5-124.7-167.0 149.9 7.0 -5.9 0.5 66 65 A L E -C 27 0B 32 -12,-0.5 -13,-2.0 -2,-0.3 2,-0.4 -0.861 21.8-168.0-103.1 139.0 6.7 -2.4 1.9 67 66 A Y E +CD 26 52B 16 -41,-2.6 -41,-1.7 -2,-0.4 2,-0.3 -0.872 16.2 173.4-138.1 93.5 5.7 0.3 -0.5 68 67 A Y E -CD 25 51B 45 -17,-1.5 -17,-2.8 -2,-0.4 2,-0.3 -0.721 13.6-176.3-115.2 156.4 6.2 3.9 0.8 69 68 A T E -C 24 0B 3 -45,-2.3 -45,-2.4 -2,-0.3 2,-1.3 -0.965 36.5-114.2-143.4 156.2 5.9 7.5 -0.5 70 69 A E - 0 0 93 -21,-0.4 -47,-0.2 -2,-0.3 2,-0.2 -0.650 48.6-169.0 -91.8 75.4 6.6 11.0 0.8 71 70 A F - 0 0 3 -2,-1.3 -49,-2.9 -50,-0.1 -2,-0.0 -0.437 18.5-162.1 -77.4 143.3 2.9 12.2 0.7 72 71 A T - 0 0 36 -51,-0.2 2,-1.7 -2,-0.2 -54,-0.1 -0.960 11.6-150.0-123.5 105.1 1.8 15.8 1.1 73 72 A P - 0 0 19 0, 0.0 2,-0.4 0, 0.0 -53,-0.1 -0.567 18.1-159.5 -82.0 82.9 -2.0 16.0 2.0 74 73 A T > - 0 0 67 -2,-1.7 3,-1.4 -56,-0.2 2,-0.8 -0.511 53.1 -53.3 -71.7 121.5 -2.8 19.4 0.4 75 74 A E T 3 S- 0 0 186 -2,-0.4 -57,-0.1 1,-0.3 -1,-0.0 -0.320 130.6 -1.2 55.6 -93.7 -6.0 20.9 1.9 76 75 A K T 3 S+ 0 0 200 -2,-0.8 -1,-0.3 2,-0.0 2,-0.2 -0.072 88.5 147.2-121.3 28.9 -8.6 18.1 1.4 77 76 A D < - 0 0 42 -3,-1.4 2,-0.5 1,-0.1 -2,-0.0 -0.468 33.2-157.7 -64.3 137.1 -6.5 15.4 -0.3 78 77 A E - 0 0 100 -2,-0.2 2,-0.3 18,-0.0 -1,-0.1 -0.921 10.8-155.9-117.0 98.2 -7.6 11.8 0.5 79 78 A Y + 0 0 18 -2,-0.5 17,-1.1 18,-0.2 18,-0.3 -0.591 19.3 174.8 -74.8 133.6 -4.6 9.6 -0.2 80 79 A A E -GH 41 95D 11 -39,-1.5 -39,-2.6 -2,-0.3 2,-0.4 -0.792 22.5-129.2-136.2 173.7 -5.5 5.9 -0.9 81 80 A a E -GH 40 94D 0 13,-1.9 13,-0.9 -2,-0.2 -41,-0.2 -0.985 13.0-132.0-138.5 120.5 -3.8 2.7 -2.0 82 81 A R E - H 0 93D 35 -43,-2.8 2,-0.4 -2,-0.4 11,-0.2 -0.470 21.8-167.8 -63.3 139.5 -4.5 0.3 -4.8 83 82 A V E + H 0 92D 2 9,-1.0 9,-2.1 -2,-0.1 -45,-0.2 -0.976 21.4 151.5-132.0 119.8 -4.4 -3.4 -3.6 84 83 A N E +E 37 0C 21 -47,-1.2 -47,-1.1 -2,-0.4 2,-0.1 -0.540 8.0 167.3-151.9 76.1 -4.5 -6.1 -6.3 85 84 A H E > -E 36 0C 0 -49,-0.3 3,-1.1 -2,-0.1 -49,-0.2 -0.475 57.9 -96.0 -75.0 162.2 -2.8 -9.4 -5.4 86 85 A V T 3 S+ 0 0 75 -51,-1.3 -50,-0.1 1,-0.3 -1,-0.1 0.818 126.2 60.2 -53.7 -33.4 -3.5 -12.2 -7.9 87 86 A T T 3 S+ 0 0 32 -83,-0.2 2,-0.9 1,-0.1 -1,-0.3 0.871 87.2 83.6 -61.2 -39.8 -6.3 -13.5 -5.6 88 87 A L < - 0 0 30 -3,-1.1 -1,-0.1 1,-0.2 4,-0.0 -0.587 60.6-170.3 -70.5 106.0 -8.1 -10.1 -5.9 89 88 A S S S+ 0 0 121 -2,-0.9 -1,-0.2 1,-0.1 -2,-0.1 0.572 80.3 37.9 -69.3 -12.6 -10.2 -10.4 -9.1 90 89 A Q S S- 0 0 149 -7,-0.1 2,-0.6 -3,-0.0 -1,-0.1 -0.992 97.5-107.9-141.3 135.9 -10.8 -6.6 -8.7 91 90 A P - 0 0 65 0, 0.0 2,-0.8 0, 0.0 -7,-0.2 -0.525 30.2-147.9 -71.9 111.8 -8.4 -3.9 -7.5 92 91 A K E -H 83 0D 122 -9,-2.1 2,-2.0 -2,-0.6 -9,-1.0 -0.736 2.4-151.0 -83.0 108.4 -9.5 -2.9 -4.0 93 92 A I E -H 82 0D 88 -2,-0.8 2,-0.5 -11,-0.2 -11,-0.3 -0.550 19.2-165.4 -82.6 74.4 -8.6 0.8 -3.6 94 93 A V E -H 81 0D 42 -2,-2.0 -13,-1.9 -13,-0.9 2,-0.1 -0.519 14.5-133.9 -66.1 112.4 -8.1 0.5 0.2 95 94 A K E -H 80 0D 132 -2,-0.5 -15,-0.2 -15,-0.3 -85,-0.1 -0.428 14.8-131.0 -66.4 145.1 -8.0 4.1 1.6 96 95 A W - 0 0 28 -17,-1.1 2,-0.3 1,-0.2 -86,-0.2 0.985 33.1-114.5 -63.0 -86.1 -5.2 4.6 4.1 97 96 A D - 0 0 88 -18,-0.3 -1,-0.2 -86,-0.1 -18,-0.2 -0.897 7.1-118.9 165.5 177.9 -6.5 6.3 7.3 98 97 A R - 0 0 193 -2,-0.3 -87,-0.0 1,-0.1 -2,-0.0 -0.534 22.3-179.5-146.8 84.9 -5.9 9.6 9.1 99 98 A D 0 0 121 1,-0.1 -1,-0.1 -2,-0.1 -88,-0.0 0.873 360.0 360.0 -43.0 -45.1 -4.4 8.8 12.5 100 99 A M 0 0 122 -3,-0.1 -84,-0.2 0, 0.0 -1,-0.1 -0.874 360.0 360.0-153.5 360.0 -4.5 12.6 12.8