==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-JAN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 22-DEC-06 2JN4 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN FIXU, NIFT; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; . AUTHOR A.LEMAK,S.SRISAILAM,A.YEE,M.D.KARRA,J.A.LUKIN,C.H.ARROWSMITH . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3837.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 39.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 180 0, 0.0 2,-0.4 0, 0.0 63,-0.0 0.000 360.0 360.0 360.0 157.9 3.3 0.6 -1.1 2 2 A K + 0 0 116 60,-0.3 16,-0.9 2,-0.0 15,-0.6 -0.977 360.0 160.5-130.3 130.2 3.2 -3.2 -1.0 3 3 A V E -AB 16 61A 0 58,-2.8 58,-2.5 -2,-0.4 2,-0.6 -0.987 23.3-148.7-144.6 138.7 0.3 -5.7 -0.5 4 4 A M E -AB 15 60A 33 11,-2.9 11,-2.9 -2,-0.3 2,-0.8 -0.922 5.4-156.1-113.4 110.6 0.2 -9.4 -1.4 5 5 A I E -AB 14 59A 0 54,-2.5 54,-2.4 -2,-0.6 2,-0.4 -0.770 14.7-159.6 -84.5 111.0 -3.1 -10.9 -2.4 6 6 A R E -A 13 0A 93 7,-1.8 7,-2.5 -2,-0.8 2,-0.3 -0.801 14.1-164.0 -99.2 134.2 -2.9 -14.6 -1.6 7 7 A K E +A 12 0A 18 -2,-0.4 2,-0.3 5,-0.2 5,-0.2 -0.847 25.3 168.4-128.5 149.0 -5.4 -16.8 -3.4 8 8 A T - 0 0 90 3,-2.4 49,-0.1 -2,-0.3 5,-0.0 -0.852 53.5 -96.1-136.8 174.4 -6.9 -20.2 -3.5 9 9 A A S S+ 0 0 86 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.953 124.8 5.6 -57.1 -50.7 -10.0 -21.4 -5.6 10 10 A T S S+ 0 0 127 -3,-0.1 2,-0.2 2,-0.0 -1,-0.1 0.718 118.9 88.6-101.3 -31.3 -12.3 -20.8 -2.6 11 11 A G - 0 0 26 13,-0.0 -3,-2.4 -4,-0.0 2,-0.4 -0.488 51.7-175.7 -75.7 136.4 -9.8 -19.2 -0.3 12 12 A H E +A 7 0A 34 -2,-0.2 13,-2.7 -5,-0.2 2,-0.3 -0.939 11.4 163.6-135.0 112.8 -9.3 -15.4 -0.4 13 13 A S E -AC 6 24A 25 -7,-2.5 -7,-1.8 -2,-0.4 2,-0.4 -0.960 20.3-157.5-130.7 145.3 -6.6 -13.8 1.8 14 14 A A E -AC 5 23A 0 9,-2.4 9,-2.2 -2,-0.3 2,-0.7 -0.989 4.1-158.7-126.7 126.2 -4.9 -10.4 1.7 15 15 A Y E -AC 4 22A 41 -11,-2.9 -11,-2.9 -2,-0.4 2,-1.2 -0.884 5.2-156.7-107.5 103.6 -1.5 -9.7 3.3 16 16 A V E >>> -AC 3 21A 3 5,-3.4 5,-1.8 -2,-0.7 4,-1.6 -0.691 9.5-165.8 -77.5 98.2 -0.9 -6.0 4.0 17 17 A A T 345S+ 0 0 23 -2,-1.2 3,-0.4 -15,-0.6 -1,-0.2 0.889 81.5 58.5 -55.6 -46.6 2.9 -6.0 4.0 18 18 A K T 345S+ 0 0 144 -16,-0.9 -1,-0.3 1,-0.3 -15,-0.1 0.656 121.8 27.8 -62.7 -17.1 3.3 -2.6 5.7 19 19 A K T <45S- 0 0 108 -3,-1.5 -1,-0.3 2,-0.1 -2,-0.2 0.464 101.4-128.3-117.5 -10.1 1.4 -3.8 8.7 20 20 A D T <5 + 0 0 119 -4,-1.6 2,-0.7 -3,-0.4 -3,-0.2 0.798 59.0 150.8 60.9 30.2 2.2 -7.5 8.3 21 21 A L E < -C 16 0A 24 -5,-1.8 -5,-3.4 2,-0.0 2,-0.6 -0.844 26.1-178.6 -99.1 114.4 -1.5 -8.1 8.5 22 22 A E E +C 15 0A 96 -2,-0.7 2,-0.3 -7,-0.3 -7,-0.2 -0.965 17.1 165.2-110.4 118.5 -2.9 -11.1 6.7 23 23 A E E -C 14 0A 53 -9,-2.2 -9,-2.4 -2,-0.6 2,-0.2 -0.917 38.4 -98.5-134.5 158.8 -6.7 -11.4 7.0 24 24 A L E -C 13 0A 103 -2,-0.3 17,-2.1 -11,-0.2 2,-0.8 -0.509 35.8-118.7 -77.2 141.2 -9.5 -13.3 5.3 25 25 A I E +D 40 0B 13 -13,-2.7 15,-0.2 15,-0.2 -13,-0.1 -0.734 43.1 159.8 -83.1 110.2 -11.6 -11.5 2.7 26 26 A V E + 0 0 93 13,-1.4 2,-0.4 -2,-0.8 -1,-0.2 0.657 65.9 39.4-102.9 -23.6 -15.2 -11.4 3.9 27 27 A E E -D 39 0B 104 12,-1.9 12,-2.8 3,-0.0 2,-0.3 -0.997 68.3-176.3-133.9 133.7 -16.4 -8.5 1.7 28 28 A M E -D 38 0B 50 -2,-0.4 10,-0.2 10,-0.2 6,-0.1 -0.892 33.6-138.6-128.7 153.0 -15.6 -8.0 -2.0 29 29 A E S S+ 0 0 106 8,-1.0 -1,-0.1 4,-0.8 5,-0.1 0.943 103.8 26.6 -66.7 -51.8 -16.3 -5.4 -4.7 30 30 A N S S- 0 0 63 3,-1.0 -1,-0.3 7,-0.2 6,-0.1 -0.929 92.0-114.8-114.6 135.5 -16.8 -8.2 -7.2 31 31 A P S S+ 0 0 118 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.732 119.9 47.4 -38.4 -31.5 -17.9 -11.7 -6.1 32 32 A A S S- 0 0 23 2,-0.2 22,-0.1 1,-0.1 3,-0.1 0.979 119.0-106.7 -72.3 -69.5 -14.5 -12.9 -7.3 33 33 A L S S+ 0 0 0 1,-0.6 -3,-1.0 21,-0.1 -4,-0.8 -0.228 83.8 75.5 176.6 -71.7 -12.3 -10.2 -5.6 34 34 A W + 0 0 3 19,-2.0 -1,-0.6 18,-0.3 -2,-0.2 -0.132 53.6 88.7 -68.1 160.3 -10.8 -7.5 -7.9 35 35 A G S S- 0 0 45 13,-0.3 -1,-0.2 1,-0.2 3,-0.1 -0.200 103.2 -31.6 147.2 -46.2 -12.7 -4.6 -9.3 36 36 A G S S+ 0 0 16 -3,-0.4 12,-3.1 1,-0.3 2,-0.3 0.012 109.0 4.0-158.6 -85.8 -12.6 -1.8 -6.8 37 37 A K E - E 0 47B 41 10,-0.3 -8,-1.0 -3,-0.1 2,-0.3 -0.836 48.3-163.8-120.6 157.4 -12.3 -2.3 -3.0 38 38 A V E -DE 28 46B 0 8,-2.1 8,-2.5 -2,-0.3 2,-0.4 -0.978 8.6-149.5-135.2 149.0 -12.1 -5.3 -0.7 39 39 A T E -DE 27 45B 24 -12,-2.8 -12,-1.9 -2,-0.3 -13,-1.4 -0.983 11.0-145.7-125.8 126.3 -12.7 -5.5 3.1 40 40 A L E > -D 25 0B 2 4,-2.9 3,-2.0 -2,-0.4 -15,-0.2 -0.356 33.2-103.5 -82.4 166.7 -10.9 -7.9 5.4 41 41 A A T 3 S+ 0 0 55 -17,-2.1 -16,-0.1 1,-0.3 -1,-0.1 0.594 121.7 63.3 -65.7 -10.1 -12.4 -9.7 8.5 42 42 A N T 3 S- 0 0 86 -18,-0.2 -1,-0.3 2,-0.2 3,-0.1 0.587 119.3-109.2 -89.2 -13.3 -10.4 -7.1 10.5 43 43 A G S < S+ 0 0 50 -3,-2.0 2,-0.1 1,-0.4 -2,-0.1 0.234 75.5 133.9 102.5 -13.1 -12.4 -4.2 9.0 44 44 A W - 0 0 69 -5,-0.1 -4,-2.9 21,-0.0 2,-0.4 -0.447 44.9-146.6 -69.6 141.8 -9.5 -2.9 6.9 45 45 A Q E -E 39 0B 65 21,-0.3 21,-1.7 -6,-0.2 2,-0.4 -0.938 13.2-171.2-113.2 135.2 -10.3 -2.0 3.3 46 46 A L E -EF 38 65B 2 -8,-2.5 -8,-2.1 -2,-0.4 2,-0.3 -0.978 18.8-129.6-127.4 137.1 -7.8 -2.4 0.5 47 47 A E E -E 37 0B 64 17,-2.7 17,-0.3 -2,-0.4 -10,-0.3 -0.693 13.5-150.0 -90.0 137.6 -8.2 -1.2 -3.1 48 48 A L - 0 0 4 -12,-3.1 -13,-0.3 -2,-0.3 15,-0.1 -0.929 12.8-144.3-107.0 122.9 -7.6 -3.4 -6.1 49 49 A P - 0 0 61 0, 0.0 -1,-0.1 0, 0.0 -12,-0.1 0.518 53.8-110.3 -59.4 -4.6 -6.4 -1.9 -9.4 50 50 A A + 0 0 54 1,-0.2 2,-0.3 -14,-0.1 3,-0.1 0.966 65.7 138.2 71.1 89.8 -8.6 -4.5 -11.1 51 51 A M + 0 0 108 1,-0.2 -1,-0.2 2,-0.0 4,-0.1 -0.845 68.2 5.3-162.1 127.1 -6.7 -7.3 -12.9 52 52 A A S S- 0 0 59 -2,-0.3 3,-0.5 2,-0.1 -18,-0.3 0.996 73.3-144.6 56.5 79.0 -7.5 -11.0 -12.9 53 53 A A S S+ 0 0 41 1,-0.3 -19,-2.0 -20,-0.1 2,-0.4 0.791 93.6 24.8 -46.5 -40.8 -10.8 -10.8 -10.9 54 54 A D S S- 0 0 61 -21,-0.2 -1,-0.3 -22,-0.1 -2,-0.1 -0.858 90.0-149.3-125.2 94.5 -9.9 -14.1 -9.2 55 55 A T - 0 0 5 -3,-0.5 -47,-0.1 -2,-0.4 4,-0.1 -0.419 5.6-151.1 -63.6 131.6 -6.2 -14.5 -9.3 56 56 A P S S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -47,-0.1 0.438 79.8 35.8 -83.1 0.3 -5.1 -18.2 -9.5 57 57 A L S S- 0 0 97 -49,-0.1 2,-0.6 -52,-0.1 -49,-0.1 -0.947 102.1 -78.9-146.5 161.9 -1.9 -17.4 -7.6 58 58 A P - 0 0 78 0, 0.0 2,-0.4 0, 0.0 -52,-0.3 -0.562 53.7-167.8 -66.2 112.4 -0.5 -15.1 -4.9 59 59 A I E -B 5 0A 31 -54,-2.4 -54,-2.5 -2,-0.6 2,-0.6 -0.837 14.8-144.6-108.7 142.2 -0.1 -11.8 -6.5 60 60 A T E +B 4 0A 73 -2,-0.4 -56,-0.2 -56,-0.3 2,-0.2 -0.929 31.6 156.3-110.0 115.1 1.8 -8.8 -5.2 61 61 A V E -B 3 0A 23 -58,-2.5 -58,-2.8 -2,-0.6 2,-0.1 -0.682 47.6 -70.6-125.5 178.5 0.4 -5.3 -6.0 62 62 A E - 0 0 96 -60,-0.2 2,-0.4 -2,-0.2 -60,-0.3 -0.457 47.2-121.3 -74.3 146.6 0.5 -1.8 -4.5 63 63 A A + 0 0 5 -2,-0.1 2,-0.3 -17,-0.1 -15,-0.1 -0.757 36.9 163.1 -90.7 129.4 -1.3 -1.2 -1.2 64 64 A R - 0 0 100 -2,-0.4 -17,-2.7 -17,-0.3 2,-0.2 -0.795 19.1-163.4-145.4 99.6 -4.0 1.5 -1.1 65 65 A K B F 46 0B 105 -2,-0.3 -19,-0.3 -19,-0.2 -21,-0.0 -0.486 360.0 360.0 -88.8 155.0 -6.3 1.3 1.9 66 66 A L 0 0 91 -21,-1.7 -21,-0.3 -2,-0.2 -1,-0.0 -0.876 360.0 360.0-106.1 360.0 -9.7 3.0 2.3