==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 01-FEB-07 2JNR . COMPND 2 MOLECULE: VIR165; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.MUNCH,L.STANDKER,K.ADERMANN,A.SCHULZ,S.POHLMANN,C.CHAIPAN, . 43 2 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3122.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 8 18.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 180 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -59.6 -12.9 -6.7 7.6 2 2 A E + 0 0 104 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.935 360.0 51.7 -75.5 -41.8 -9.4 -8.1 8.2 3 3 A A S S- 0 0 90 1,-0.2 -1,-0.1 2,-0.0 0, 0.0 0.894 138.1 -15.2 -51.0 -50.4 -9.3 -9.5 4.7 4 4 A I - 0 0 77 2,-0.1 2,-0.3 8,-0.0 -1,-0.2 -0.797 55.9-156.2-160.7 110.8 -10.3 -6.1 3.2 5 5 A P S S+ 0 0 32 0, 0.0 -3,-0.1 0, 0.0 -2,-0.0 -0.040 82.8 11.0 -83.9 34.6 -11.8 -3.0 5.0 6 6 A a - 0 0 26 -2,-0.3 2,-0.3 2,-0.1 -2,-0.1 0.154 47.8-173.8-168.3 -92.2 -13.5 -1.4 2.0 7 7 A S S S+ 0 0 91 2,-0.3 4,-0.1 1,-0.2 -1,-0.0 -0.309 87.3 52.0 93.5 -47.3 -14.2 -2.7 -1.5 8 8 A I S S+ 0 0 158 -2,-0.3 -1,-0.2 2,-0.1 3,-0.2 0.911 95.8 53.4 -95.0 -82.2 -15.5 0.7 -2.7 9 9 A P S S- 0 0 58 0, 0.0 2,-0.9 0, 0.0 -2,-0.3 -0.098 111.7 -77.1 -58.5 162.4 -13.2 3.7 -1.9 10 10 A P S S+ 0 0 70 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 -0.397 77.5 156.3 -62.4 94.8 -9.6 3.4 -3.2 11 11 A a - 0 0 16 -2,-0.9 28,-0.1 -3,-0.2 -5,-0.0 -0.804 32.6-168.1-118.5 159.0 -8.4 0.9 -0.4 12 12 A F - 0 0 111 26,-0.3 2,-0.5 -2,-0.2 -8,-0.0 -0.260 68.0 -64.5-148.8 59.7 -5.5 -1.6 -0.5 13 13 A A S S+ 0 0 37 1,-0.1 26,-0.1 26,-0.0 -2,-0.0 -0.441 129.5 19.7 91.1 -46.5 -5.8 -3.9 2.6 14 14 A F S S+ 0 0 43 -2,-0.5 -1,-0.1 24,-0.2 -10,-0.0 -0.031 96.2 89.1-150.9 39.2 -5.2 -1.3 5.4 15 15 A N + 0 0 0 25,-0.1 18,-0.1 10,-0.1 -4,-0.1 0.857 35.6 170.9 -99.1 -65.5 -5.8 2.3 4.2 16 16 A K - 0 0 103 -7,-0.1 -5,-0.1 16,-0.1 17,-0.1 0.945 59.9-111.0 44.6 71.5 -9.7 3.1 4.7 17 17 A P - 0 0 19 0, 0.0 15,-0.1 0, 0.0 3,-0.1 0.033 34.5-160.9 -50.4 151.3 -8.5 6.6 3.7 18 18 A F S S- 0 0 98 1,-0.2 13,-0.0 13,-0.2 -2,-0.0 -0.500 87.5 -10.6-156.3 82.9 -8.3 9.6 6.1 19 19 A V 0 0 133 -2,-0.1 -1,-0.2 13,-0.1 13,-0.0 0.515 360.0 360.0-145.7 151.6 -8.2 11.3 3.8 20 20 A F 0 0 154 -3,-0.1 14,-0.1 14,-0.0 12,-0.0 -0.068 360.0 360.0-170.8 360.0 -7.8 11.1 -0.0 21 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 22 101 B A 0 0 110 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 150.7 1.4 -4.8 12.3 23 102 B V - 0 0 102 1,-0.1 2,-0.2 2,-0.0 3,-0.1 0.956 360.0-110.6 -54.8 -48.4 -2.2 -5.7 13.3 24 103 B G S > S+ 0 0 2 -10,-0.0 4,-1.3 -9,-0.0 2,-0.3 -0.793 80.3 18.1 152.2-119.2 -3.5 -3.4 10.6 25 104 B I T 4 S+ 0 0 68 -2,-0.2 2,-0.8 2,-0.2 4,-0.2 -0.677 123.1 32.9 -78.1 150.2 -5.3 -0.0 11.3 26 105 B G T >4 S+ 0 0 45 -2,-0.3 3,-1.5 1,-0.1 -1,-0.1 -0.644 117.7 51.9 104.3 -63.7 -4.8 1.2 14.9 27 106 B A T 34 S+ 0 0 54 -2,-0.8 2,-0.6 1,-0.3 -2,-0.2 0.929 116.1 45.8 -61.2 -47.2 -1.3 -0.1 15.3 28 107 B L T >< S- 0 0 38 -4,-1.3 3,-2.5 2,-0.0 -1,-0.3 -0.309 113.1-127.5 -87.1 48.4 -0.8 1.8 12.0 29 108 B F T < S- 0 0 159 -3,-1.5 3,-0.5 -2,-0.6 2,-0.4 0.449 78.3 -23.9 13.8 91.4 -2.7 4.9 13.3 30 109 B L T 3 S- 0 0 78 1,-0.2 -1,-0.3 -13,-0.0 3,-0.1 -0.105 86.1-113.0 71.5 -35.8 -5.4 5.5 10.6 31 110 B G < - 0 0 0 -3,-2.5 -1,-0.2 -2,-0.4 2,-0.2 0.995 41.1-143.2 69.5 57.7 -3.5 3.8 7.7 32 111 B F - 0 0 104 -3,-0.5 2,-1.2 8,-0.2 -1,-0.1 -0.537 7.7-128.4 -65.9 126.4 -3.1 7.2 6.1 33 112 B L - 0 0 12 -2,-0.2 2,-0.2 -18,-0.1 8,-0.1 -0.718 34.3-169.4 -68.0 101.4 -3.5 6.8 2.3 34 113 B G - 0 0 36 -2,-1.2 6,-0.1 1,-0.1 -1,-0.1 -0.745 60.1 -47.9-130.6 75.6 -0.2 8.7 1.7 35 114 B A S S- 0 0 42 6,-0.3 -1,-0.1 -2,-0.2 -2,-0.1 -0.539 111.0 -6.3-159.2 40.9 -0.6 9.0 -1.4 36 115 B A S S- 0 0 62 2,-0.0 -3,-0.1 -26,-0.0 7,-0.0 0.374 104.2 -20.5-166.2 -43.3 -1.5 6.4 -3.9 37 116 B G S S+ 0 0 34 -25,-0.0 2,-0.3 -22,-0.0 3,-0.1 -0.162 77.6 90.3 179.0 93.4 -1.8 2.8 -2.8 38 117 B S S S- 0 0 30 1,-0.1 -26,-0.3 4,-0.1 -24,-0.2 -0.977 80.6 -72.3-162.3-179.3 -0.5 0.7 0.1 39 118 B T S S- 0 0 70 -2,-0.3 -27,-0.2 1,-0.2 -1,-0.1 0.963 127.9 -11.4 -50.4 -58.8 -1.0 -0.5 3.6 40 119 B M S S- 0 0 89 1,-0.4 -8,-0.2 -3,-0.1 -1,-0.2 -0.010 128.2 -49.9-135.3 32.6 -0.3 3.1 4.9 41 120 B G - 0 0 20 -8,-0.1 -1,-0.4 -10,-0.1 -6,-0.3 0.083 49.9-123.5 112.3 142.9 1.1 5.0 1.9 42 121 B A - 0 0 45 -4,-0.1 -4,-0.1 -3,-0.1 -6,-0.0 -0.528 33.2-106.4-108.5 174.9 3.8 4.5 -0.8 43 122 B R 0 0 226 -2,-0.2 -1,-0.1 1,-0.1 -8,-0.0 0.933 360.0 360.0 -65.5 -38.7 6.7 6.8 -1.7 44 123 B S 0 0 96 -7,-0.1 -1,-0.1 -3,-0.0 -9,-0.1 0.671 360.0 360.0 54.2 360.0 4.5 7.4 -4.7