==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 01-FEB-07 2JNS . COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR Y.J.LIN,B.PADMANABHAN,S.YOKOYAMA,P.GUNTERT,RIKEN STRUCTURAL . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7926.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 18.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 34.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 113 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-137.3 -33.3 -14.2 10.0 2 2 A S + 0 0 137 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.788 360.0 18.6 -59.6 -26.6 -37.1 -13.7 9.3 3 3 A S S S+ 0 0 105 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.813 71.2 165.6-134.2 169.4 -35.9 -10.3 7.8 4 4 A G - 0 0 64 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.920 10.5-164.8-175.2 169.1 -32.5 -8.9 6.7 5 5 A S - 0 0 124 -2,-0.3 2,-0.2 0, 0.0 -2,-0.0 -0.964 4.2-169.4-164.9 160.2 -31.2 -5.9 4.6 6 6 A S + 0 0 128 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.662 34.9 124.9-139.6-172.8 -28.0 -4.6 2.8 7 7 A G + 0 0 77 1,-0.3 2,-0.4 -2,-0.2 -1,-0.1 0.450 35.0 148.8 125.5 8.5 -26.9 -1.3 1.3 8 8 A E > - 0 0 149 1,-0.1 3,-0.7 3,-0.0 4,-0.4 -0.632 44.9-142.5 -75.1 128.7 -23.5 -0.8 3.1 9 9 A S T 3> S+ 0 0 71 -2,-0.4 4,-0.6 1,-0.2 -1,-0.1 0.512 86.2 85.4 -68.7 -6.7 -21.0 1.1 0.9 10 10 A E T >4 S+ 0 0 141 1,-0.2 3,-1.1 2,-0.2 4,-0.2 0.949 88.2 48.5 -61.5 -49.5 -18.1 -1.1 2.3 11 11 A E T <4 S+ 0 0 155 -3,-0.7 3,-0.5 1,-0.2 -1,-0.2 0.787 109.3 51.7 -62.5 -33.8 -18.6 -3.9 -0.2 12 12 A E T 34 S+ 0 0 152 -4,-0.4 -1,-0.2 1,-0.2 -2,-0.2 0.517 117.6 36.8 -84.7 -6.0 -18.8 -1.7 -3.3 13 13 A D S << S+ 0 0 88 -3,-1.1 3,-0.3 -4,-0.6 -1,-0.2 0.119 70.7 131.9-133.2 22.2 -15.5 0.2 -2.5 14 14 A K S S- 0 0 154 -3,-0.5 2,-0.2 1,-0.2 -2,-0.1 0.795 88.6 -25.4 -41.4 -49.4 -13.3 -2.6 -1.0 15 15 A C - 0 0 61 -3,-0.1 -1,-0.2 58,-0.0 55,-0.1 -0.653 63.1-139.5-174.1 114.4 -10.3 -1.7 -3.3 16 16 A K - 0 0 112 -3,-0.3 57,-0.1 -2,-0.2 -3,-0.0 -0.365 40.1 -90.8 -72.5 158.4 -10.3 0.1 -6.7 17 17 A P - 0 0 111 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.142 34.4-128.5 -65.1 168.0 -7.8 -1.2 -9.4 18 18 A M - 0 0 21 4,-0.0 2,-0.0 3,-0.0 52,-0.0 -0.988 17.3-144.9-126.5 120.5 -4.3 0.2 -9.8 19 19 A S > - 0 0 77 -2,-0.5 4,-2.2 1,-0.1 3,-0.2 -0.256 30.6-104.7 -75.5 169.1 -3.0 1.4 -13.2 20 20 A Y H > S+ 0 0 152 1,-0.2 4,-2.5 2,-0.2 5,-0.1 0.913 124.6 53.9 -61.4 -39.9 0.6 1.1 -14.4 21 21 A E H > S+ 0 0 137 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.802 106.9 50.9 -63.8 -33.4 1.0 4.8 -13.7 22 22 A E H > S+ 0 0 76 -3,-0.2 4,-2.9 2,-0.2 5,-0.2 0.970 111.4 47.1 -67.9 -53.8 -0.2 4.3 -10.1 23 23 A K H X S+ 0 0 48 -4,-2.2 4,-1.4 1,-0.2 -2,-0.2 0.876 115.7 46.0 -54.5 -44.7 2.3 1.4 -9.6 24 24 A R H >X S+ 0 0 120 -4,-2.5 4,-1.6 2,-0.2 3,-0.5 0.959 111.3 50.5 -67.0 -49.3 5.1 3.5 -11.1 25 25 A Q H 3X S+ 0 0 95 -4,-2.7 4,-1.9 1,-0.3 3,-0.3 0.907 108.4 53.5 -54.2 -44.0 4.2 6.7 -9.1 26 26 A L H 3X S+ 0 0 1 -4,-2.9 4,-2.2 1,-0.2 -1,-0.3 0.868 105.2 55.5 -58.5 -37.4 4.2 4.6 -5.9 27 27 A S H < S+ 0 0 39 -4,-1.9 3,-1.0 1,-0.2 4,-0.3 0.848 112.9 53.6 -61.0 -35.9 7.7 8.0 -3.6 30 30 A I H >< S+ 0 0 12 -4,-2.2 3,-1.8 1,-0.3 -1,-0.2 0.921 105.2 55.3 -62.9 -42.1 9.1 4.6 -2.3 31 31 A N T 3< S+ 0 0 120 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.581 100.9 59.8 -66.4 -13.6 12.5 5.6 -3.9 32 32 A K T < S+ 0 0 156 -3,-1.0 -1,-0.3 -4,-0.5 -2,-0.2 0.497 83.8 108.1 -90.5 -9.1 12.3 8.9 -1.8 33 33 A L S < S- 0 0 13 -3,-1.8 5,-0.1 -4,-0.3 2,-0.1 -0.526 73.7-118.2 -74.4 140.0 12.2 7.0 1.5 34 34 A P >> - 0 0 53 0, 0.0 4,-2.0 0, 0.0 3,-1.6 -0.374 33.4-104.8 -69.4 154.6 15.3 6.9 3.9 35 35 A G H 3> S+ 0 0 62 1,-0.3 4,-1.6 2,-0.2 3,-0.4 0.870 120.2 51.5 -47.7 -51.2 16.8 3.5 4.5 36 36 A E H 34 S+ 0 0 162 1,-0.2 -1,-0.3 2,-0.2 -3,-0.0 0.713 117.4 40.2 -63.8 -21.8 15.4 3.1 8.0 37 37 A K H X4 S+ 0 0 91 -3,-1.6 3,-0.8 2,-0.1 4,-0.3 0.666 106.1 64.6 -99.3 -18.6 11.8 4.0 6.7 38 38 A L H >X S+ 0 0 74 -4,-2.0 3,-2.6 -3,-0.4 4,-0.7 0.930 91.4 62.8 -71.3 -42.7 12.1 1.9 3.5 39 39 A G T 3< S+ 0 0 39 -4,-1.6 4,-0.4 1,-0.3 -1,-0.2 0.461 94.8 63.9 -61.7 -4.1 12.4 -1.5 5.3 40 40 A R T <> S+ 0 0 148 -3,-0.8 4,-0.5 2,-0.1 -1,-0.3 0.657 90.4 66.6 -88.8 -19.9 8.8 -0.8 6.7 41 41 A V H X> S+ 0 0 2 -3,-2.6 3,-2.2 -4,-0.3 4,-0.9 0.969 96.3 53.5 -62.9 -54.0 7.5 -0.9 3.1 42 42 A V H 3X S+ 0 0 8 -4,-0.7 4,-1.9 1,-0.3 3,-0.4 0.827 100.6 61.5 -52.0 -37.5 8.3 -4.7 2.7 43 43 A H H 3> S+ 0 0 83 -4,-0.4 4,-0.9 1,-0.2 -1,-0.3 0.748 96.8 60.1 -62.9 -26.8 6.3 -5.4 5.9 44 44 A I H X< S+ 0 0 28 -3,-2.2 3,-0.5 -4,-0.5 4,-0.4 0.917 103.9 49.1 -69.3 -41.3 3.2 -4.0 4.2 45 45 A I H >X S+ 0 0 5 -4,-0.9 4,-2.7 -3,-0.4 3,-2.5 0.940 106.0 56.6 -64.3 -42.8 3.5 -6.7 1.5 46 46 A Q H 3< S+ 0 0 41 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.780 98.1 63.1 -58.3 -25.2 3.9 -9.4 4.3 47 47 A S T << S+ 0 0 79 -4,-0.9 -1,-0.3 -3,-0.5 -2,-0.2 0.678 116.9 28.6 -71.4 -15.8 0.5 -8.1 5.6 48 48 A R T <4 S+ 0 0 113 -3,-2.5 -2,-0.2 -4,-0.4 -1,-0.2 0.677 116.7 60.4-113.6 -29.7 -1.1 -9.3 2.3 49 49 A E >X + 0 0 33 -4,-2.7 3,-1.6 1,-0.2 4,-0.7 -0.843 50.6 177.8-108.2 95.6 1.2 -12.2 1.3 50 50 A P G >4 S+ 0 0 77 0, 0.0 3,-0.8 0, 0.0 -1,-0.2 0.858 86.3 64.7 -63.8 -27.1 1.2 -15.0 3.9 51 51 A S G 34 S+ 0 0 96 1,-0.2 3,-0.2 -3,-0.1 -5,-0.1 0.671 108.0 39.5 -65.7 -20.7 3.6 -16.7 1.5 52 52 A L G X4 S+ 0 0 58 -3,-1.6 3,-1.7 -7,-0.1 -1,-0.2 0.415 87.3 96.1-108.0 -4.7 6.2 -13.9 2.1 53 53 A K T << S+ 0 0 120 -3,-0.8 -2,-0.1 -4,-0.7 -1,-0.1 0.466 87.9 46.1 -66.8 -5.1 5.6 -13.5 5.9 54 54 A N T 3 S+ 0 0 145 -4,-0.2 -1,-0.3 -3,-0.2 2,-0.2 0.114 94.8 98.8-121.4 13.7 8.6 -15.8 6.8 55 55 A S S < S- 0 0 46 -3,-1.7 5,-0.1 1,-0.1 -3,-0.1 -0.641 80.8 -99.6-100.6 158.4 11.1 -14.2 4.3 56 56 A N > - 0 0 93 -2,-0.2 3,-1.8 1,-0.1 4,-0.3 -0.527 26.7-124.0 -74.3 149.2 13.8 -11.6 5.1 57 57 A P T 3 S+ 0 0 65 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 0.728 115.1 51.5 -66.5 -20.9 13.0 -8.0 4.3 58 58 A D T 3 S+ 0 0 133 1,-0.2 -2,-0.0 3,-0.0 3,-0.0 0.267 106.4 53.9 -95.3 4.6 16.1 -7.9 2.1 59 59 A E S < S+ 0 0 146 -3,-1.8 2,-0.6 2,-0.0 -1,-0.2 0.261 89.0 91.7-119.2 2.9 15.1 -11.1 0.2 60 60 A I - 0 0 15 -4,-0.3 2,-0.3 -3,-0.3 -18,-0.1 -0.922 60.3-160.4-107.7 113.1 11.6 -9.8 -0.8 61 61 A E - 0 0 163 -2,-0.6 2,-0.9 2,-0.0 -2,-0.0 -0.710 20.7-125.5 -89.1 144.5 11.5 -8.0 -4.2 62 62 A I - 0 0 46 -2,-0.3 2,-0.7 4,-0.0 3,-0.1 -0.838 29.1-177.6-100.1 103.5 8.5 -5.7 -4.8 63 63 A D >> - 0 0 60 -2,-0.9 4,-2.0 1,-0.1 3,-1.5 -0.868 10.8-176.1-102.8 96.7 6.9 -6.8 -8.1 64 64 A F T 34 S+ 0 0 30 -2,-0.7 -1,-0.1 1,-0.3 8,-0.1 0.727 83.6 66.8 -67.7 -19.3 3.9 -4.4 -8.8 65 65 A E T 34 S+ 0 0 172 1,-0.1 -1,-0.3 -3,-0.1 -3,-0.0 0.583 111.6 27.9 -77.0 -17.6 3.2 -6.7 -11.7 66 66 A T T <4 S+ 0 0 86 -3,-1.5 -2,-0.2 2,-0.1 -1,-0.1 0.608 101.6 95.7-118.9 -22.1 2.2 -9.7 -9.4 67 67 A L S < S- 0 0 13 -4,-2.0 -22,-0.0 1,-0.1 -5,-0.0 -0.277 78.9-105.4 -71.4 155.5 1.0 -7.8 -6.3 68 68 A K > - 0 0 113 1,-0.1 4,-1.5 -51,-0.0 3,-0.5 -0.461 22.2-117.6 -80.0 154.4 -2.7 -7.1 -5.8 69 69 A P H > S+ 0 0 48 0, 0.0 4,-2.0 0, 0.0 -53,-0.1 0.849 114.9 57.9 -59.4 -36.2 -4.3 -3.6 -6.2 70 70 A S H > S+ 0 0 33 2,-0.2 4,-1.4 1,-0.2 5,-0.1 0.894 102.7 53.5 -61.8 -41.1 -5.3 -3.6 -2.5 71 71 A T H > S+ 0 0 1 -3,-0.5 4,-2.1 1,-0.2 3,-0.4 0.930 108.0 49.8 -60.2 -47.3 -1.6 -4.1 -1.4 72 72 A L H X S+ 0 0 0 -4,-1.5 4,-3.1 1,-0.2 -1,-0.2 0.894 105.7 57.0 -61.4 -41.2 -0.5 -1.1 -3.5 73 73 A R H X S+ 0 0 131 -4,-2.0 4,-1.3 1,-0.2 -1,-0.2 0.841 109.0 46.3 -60.6 -34.5 -3.3 1.1 -1.9 74 74 A E H X S+ 0 0 77 -4,-1.4 4,-1.6 -3,-0.4 -1,-0.2 0.903 113.6 47.9 -72.4 -42.1 -1.9 0.3 1.5 75 75 A L H X S+ 0 0 1 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.921 109.2 54.4 -62.3 -44.9 1.7 1.0 0.4 76 76 A E H X S+ 0 0 46 -4,-3.1 4,-2.5 1,-0.2 -1,-0.2 0.853 105.9 53.0 -57.6 -38.8 0.5 4.3 -1.2 77 77 A R H X S+ 0 0 193 -4,-1.3 4,-1.6 -5,-0.2 -1,-0.2 0.900 105.8 54.0 -65.8 -41.1 -1.0 5.4 2.1 78 78 A Y H < S+ 0 0 58 -4,-1.6 4,-0.5 2,-0.2 -2,-0.2 0.945 114.8 38.6 -59.5 -51.0 2.3 4.8 3.9 79 79 A V H >X S+ 0 0 2 -4,-1.9 4,-2.8 1,-0.2 3,-1.4 0.955 116.6 49.3 -67.0 -49.2 4.3 7.0 1.5 80 80 A T H 3< S+ 0 0 60 -4,-2.5 4,-0.3 1,-0.3 -1,-0.2 0.731 115.6 44.6 -65.3 -23.2 1.7 9.8 1.1 81 81 A S T 3< S+ 0 0 78 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.452 116.2 48.3 -93.8 -10.5 1.3 9.9 4.9 82 82 A C T <4 S+ 0 0 51 -3,-1.4 -2,-0.2 -4,-0.5 -3,-0.2 0.858 120.7 32.9 -89.7 -56.1 5.1 9.9 5.4 83 83 A L S < S+ 0 0 84 -4,-2.8 2,-0.2 -5,-0.1 -3,-0.2 0.641 136.4 14.7 -74.5 -20.5 6.1 12.6 2.9 84 84 A R - 0 0 151 -5,-0.4 2,-0.3 -4,-0.3 0, 0.0 -0.850 65.0-171.2-146.0 172.8 2.8 14.5 3.6 85 85 A K - 0 0 158 -2,-0.2 2,-0.5 2,-0.1 -4,-0.1 -0.949 25.9-121.6-160.9 170.1 -0.1 14.6 6.2 86 86 A K + 0 0 175 -2,-0.3 2,-0.3 -5,-0.1 -5,-0.0 -0.832 56.0 126.8-126.4 87.6 -3.5 16.2 6.6 87 87 A R - 0 0 203 -2,-0.5 -2,-0.1 2,-0.0 0, 0.0 -0.993 34.8-171.6-145.9 140.7 -3.6 18.4 9.8 88 88 A K - 0 0 192 -2,-0.3 -2,-0.0 2,-0.0 2,-0.0 -0.808 24.6-179.1-129.9 79.6 -4.5 22.0 10.6 89 89 A P 0 0 107 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.194 360.0 360.0 -74.1 174.5 -3.5 22.6 14.2 90 90 A Q 0 0 245 -2,-0.0 -2,-0.0 0, 0.0 0, 0.0 -0.938 360.0 360.0-137.7 360.0 -3.9 25.8 16.2