==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 01-MAR-07 2JO9 . COMPND 2 MOLECULE: ITCHY E3 UBIQUITIN PROTEIN LIGASE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.J.MACIAS,A.Z.SHAW,P.MARTIN-MALPARTIDA,B.MORALES,L.RUIZ, . 39 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3494.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 43.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 25.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A P 0 0 159 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.4 0.2 -10.3 -4.6 2 6 A L - 0 0 58 1,-0.0 6,-0.1 4,-0.0 28,-0.0 -0.492 360.0-136.0 -89.9 149.8 -2.5 -8.1 -3.1 3 7 A P > - 0 0 84 0, 0.0 2,-1.5 0, 0.0 3,-1.0 -0.912 46.3-116.9 -96.6 106.7 -6.2 -8.8 -2.7 4 8 A P T 3 S+ 0 0 110 0, 0.0 3,-0.1 0, 0.0 16,-0.0 -0.408 97.9 91.4 -89.4 88.4 -7.5 -5.5 -3.8 5 9 A G T 3 S+ 0 0 32 -2,-1.5 16,-1.6 2,-0.0 17,-0.4 0.159 99.7 69.8 -90.6 -19.9 -9.4 -3.4 -1.5 6 10 A W E < S-A 20 0A 67 -3,-1.0 2,-0.3 14,-0.2 14,-0.3 -0.564 79.3-154.3 -89.7 150.6 -5.7 -2.6 -1.4 7 11 A E E -A 19 0A 56 12,-2.0 12,-2.0 -2,-0.2 2,-0.9 -0.924 22.3-111.7-130.3 150.7 -3.8 -0.9 -4.2 8 12 A K E +A 18 0A 110 -2,-0.3 2,-0.5 10,-0.2 10,-0.2 -0.761 42.0 168.4 -89.6 106.5 -0.2 -1.1 -5.1 9 13 A R E -A 17 0A 52 8,-1.7 8,-2.9 -2,-0.9 2,-0.3 -0.982 19.1-154.7-115.7 128.6 1.4 2.3 -4.5 10 14 A T E -A 16 0A 57 -2,-0.5 2,-0.3 6,-0.3 6,-0.3 -0.707 21.6-120.4 -89.8 149.7 5.2 2.7 -4.6 11 15 A D - 0 0 55 4,-3.0 4,-0.0 -2,-0.3 0, 0.0 -0.755 57.9 -74.1 -89.8 150.7 6.9 5.4 -2.7 12 16 A S S S+ 0 0 136 -2,-0.3 -2,-0.1 1,-0.2 -1,-0.0 0.465 118.9 12.0 -29.3 -51.5 8.8 7.6 -5.1 13 17 A N S S- 0 0 158 2,-0.0 -1,-0.2 0, 0.0 -3,-0.0 0.914 128.6 -16.2 -90.6 -80.9 11.7 5.3 -5.9 14 18 A G S S+ 0 0 51 -4,-0.1 2,-0.2 2,-0.0 -2,-0.1 0.934 92.5 87.9 -91.5 -55.8 11.6 1.7 -4.8 15 19 A R - 0 0 93 -5,-0.1 -4,-3.0 1,-0.1 2,-0.4 -0.332 47.0-154.4 -89.6 134.1 9.1 0.6 -2.2 16 20 A V E -A 10 0A 57 -6,-0.3 2,-0.4 -2,-0.2 -6,-0.3 -0.789 12.1-176.1 -95.1 137.4 5.5 -0.7 -2.6 17 21 A Y E -A 9 0A 11 -8,-2.9 -8,-1.7 -2,-0.4 2,-0.6 -0.979 28.3-118.8-127.7 145.0 3.1 -0.4 0.2 18 22 A F E -AB 8 27A 34 9,-1.5 9,-2.5 -2,-0.4 2,-0.4 -0.735 32.9-171.0 -89.8 122.7 -0.4 -1.8 0.2 19 23 A V E -AB 7 26A 0 -12,-2.0 -12,-2.0 -2,-0.6 2,-0.4 -0.955 11.8-149.2-122.8 129.4 -3.0 1.0 0.6 20 24 A N E >> -AB 6 25A 21 5,-2.1 5,-1.4 -2,-0.4 4,-1.0 -0.831 3.6-161.0-101.3 132.7 -6.7 0.5 1.1 21 25 A H T 45S+ 0 0 94 -16,-1.6 -1,-0.1 -2,-0.4 -15,-0.1 0.795 89.2 54.3 -79.8 -29.7 -9.2 3.1 -0.2 22 26 A N T 45S+ 0 0 141 -17,-0.4 -1,-0.1 1,-0.2 -16,-0.1 0.909 121.8 27.6 -74.7 -42.5 -12.1 2.1 2.0 23 27 A T T 45S- 0 0 86 2,-0.1 -1,-0.2 -18,-0.1 -2,-0.2 0.673 102.0-135.3 -89.8 -19.8 -10.2 2.4 5.3 24 28 A R T <5 + 0 0 176 -4,-1.0 2,-0.3 1,-0.2 14,-0.2 0.991 54.8 134.1 60.2 65.0 -7.9 5.0 3.9 25 29 A I E < -B 20 0A 70 -5,-1.4 -5,-2.1 12,-0.1 2,-0.5 -0.998 49.5-142.9-145.8 146.3 -4.7 3.6 5.3 26 30 A T E -B 19 0A 16 -2,-0.3 2,-0.4 -7,-0.2 -7,-0.2 -0.948 26.1-178.2-111.4 118.3 -1.2 2.9 4.1 27 31 A Q E -B 18 0A 67 -9,-2.5 -9,-1.5 -2,-0.5 -2,-0.0 -0.909 33.2-153.5-122.2 146.9 0.4 -0.3 5.4 28 32 A W S S+ 0 0 66 -2,-0.4 2,-0.3 -11,-0.2 -1,-0.1 0.447 77.1 92.6 -86.2 -3.2 3.9 -1.9 4.9 29 33 A E 0 0 128 -11,-0.2 -11,-0.2 -12,-0.0 -2,-0.1 -0.666 360.0 360.0-101.1 145.8 2.2 -5.2 5.7 30 34 A D 0 0 152 -2,-0.3 -2,-0.0 -13,-0.1 -28,-0.0 -0.942 360.0 360.0-106.8 360.0 0.7 -7.8 3.5 31 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 32 101 B E 0 0 230 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 78.3 11.6 2.7 12.6 33 102 B E - 0 0 118 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.975 360.0-122.2-127.4 148.6 10.1 4.2 9.5 34 103 B P - 0 0 105 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.582 23.2-124.9 -78.3 148.6 7.0 6.5 9.1 35 104 B P - 0 0 80 0, 0.0 -8,-0.1 0, 0.0 -18,-0.0 -0.660 29.0-113.2 -78.2 148.8 4.1 5.6 6.8 36 105 B P - 0 0 36 0, 0.0 -10,-0.2 0, 0.0 2,-0.1 -0.621 38.8-104.3 -77.8 148.7 3.2 8.1 4.1 37 106 B P - 0 0 113 0, 0.0 2,-1.2 0, 0.0 -12,-0.1 -0.419 31.5-105.7 -77.8 149.0 -0.2 9.8 4.7 38 107 B Y S S+ 0 0 71 -14,-0.2 2,-0.2 -2,-0.1 -12,-0.0 -0.630 74.9 116.7 -78.0 98.6 -3.2 8.7 2.6 39 108 B E 0 0 158 -2,-1.2 -15,-0.0 1,-0.1 0, 0.0 -0.723 360.0 360.0-163.4 110.4 -3.7 11.6 0.2 40 109 B D 0 0 186 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 0.987 360.0 360.0 -69.4 360.0 -3.3 11.2 -3.5