==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SURFACE ACTIVE PROTEIN 26-MAR-07 2JOU . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR V.BOOTH,M.SARKER,K.M.W.KEOUGH,A.J.WARING,F.J.WALTHER . 34 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4097.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A C 0 0 169 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 77.2 -37.1 1.9 -0.9 2 2 A W + 0 0 188 2,-0.0 2,-4.5 0, 0.0 4,-0.0 -0.057 360.0 133.1-153.1 -96.3 -33.4 1.4 -0.0 3 3 A L > + 0 0 127 1,-0.2 3,-3.7 2,-0.1 4,-0.4 -0.090 55.7 99.0 59.2 -45.6 -31.0 -0.9 -1.9 4 4 A C T >> + 0 0 78 -2,-4.5 4,-1.5 1,-0.3 3,-0.6 0.699 62.9 81.8 -42.1 -21.0 -28.4 1.9 -1.9 5 5 A R H 3> S+ 0 0 165 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.667 84.4 60.6 -61.4 -14.9 -27.0 -0.1 1.1 6 6 A A H <> S+ 0 0 23 -3,-3.7 4,-1.0 2,-0.2 -1,-0.2 0.871 99.8 51.0 -81.3 -38.4 -25.4 -2.2 -1.6 7 7 A L H <> S+ 0 0 90 -3,-0.6 4,-1.4 -4,-0.4 -2,-0.2 0.832 109.5 53.7 -67.0 -31.8 -23.3 0.6 -3.2 8 8 A I H X S+ 0 0 94 -4,-1.5 4,-1.4 1,-0.2 -1,-0.2 0.942 103.8 51.7 -70.1 -46.9 -22.1 1.5 0.3 9 9 A K H X S+ 0 0 126 -4,-1.4 4,-0.8 1,-0.2 -1,-0.2 0.780 103.5 64.2 -60.4 -22.6 -20.8 -2.0 1.1 10 10 A R H >X S+ 0 0 157 -4,-1.0 3,-2.2 2,-0.2 4,-1.2 0.976 98.2 49.3 -65.3 -52.0 -19.0 -1.8 -2.2 11 11 A I H 3X S+ 0 0 83 -4,-1.4 4,-0.6 1,-0.3 3,-0.5 0.869 103.1 66.6 -51.6 -33.8 -16.8 1.0 -1.0 12 12 A Q H 3< S+ 0 0 123 -4,-1.4 3,-0.4 1,-0.3 -1,-0.3 0.823 102.3 44.4 -57.0 -34.4 -16.3 -1.3 1.9 13 13 A A H << S+ 0 0 67 -3,-2.2 -1,-0.3 -4,-0.8 -2,-0.2 0.680 109.0 56.5 -85.0 -21.0 -14.5 -3.7 -0.4 14 14 A M H < S+ 0 0 121 -4,-1.2 -1,-0.2 -3,-0.5 -2,-0.2 0.401 79.1 93.3 -90.7 0.9 -12.4 -1.0 -2.1 15 15 A I < + 0 0 127 -4,-0.6 -1,-0.2 -3,-0.4 -2,-0.1 0.606 62.3 105.1 -71.1 -10.3 -10.8 0.3 1.1 16 16 A P + 0 0 80 0, 0.0 2,-0.2 0, 0.0 -3,-0.0 -0.148 36.5 113.7 -65.4 161.0 -7.7 -1.9 0.9 17 17 A K + 0 0 215 0, 0.0 2,-0.0 0, 0.0 -3,-0.0 -0.500 11.3 137.6 142.8 149.4 -4.2 -0.7 -0.2 18 18 A G + 0 0 69 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.195 11.4 160.1-169.7 -92.1 -0.7 -0.3 1.3 19 19 A G + 0 0 76 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.415 11.2 140.7 58.3 156.8 2.7 -1.1 -0.3 20 20 A R + 0 0 201 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.361 2.8 156.8 134.5 85.6 6.1 0.2 0.7 21 21 A M - 0 0 152 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.881 20.1-170.2 -94.1 -51.5 9.2 -2.0 0.8 22 22 A L + 0 0 129 1,-0.1 2,-0.6 2,-0.1 3,-0.3 0.983 8.4 176.4 56.0 69.5 12.1 0.5 0.5 23 23 A P + 0 0 116 0, 0.0 4,-0.3 0, 0.0 -1,-0.1 -0.377 35.1 123.2 -99.7 54.2 15.1 -1.9 -0.1 24 24 A Q > + 0 0 102 -2,-0.6 4,-1.7 1,-0.1 5,-0.3 0.413 45.3 93.8 -91.6 -1.2 17.8 0.8 -0.6 25 25 A L H > S+ 0 0 93 -3,-0.3 4,-2.4 1,-0.2 5,-0.3 0.986 86.3 38.8 -54.6 -77.5 20.1 -0.5 2.1 26 26 A V H > S+ 0 0 109 1,-0.2 4,-1.4 3,-0.2 5,-0.4 0.786 111.9 65.1 -46.7 -31.7 22.5 -2.9 0.4 27 27 A C H 4 S+ 0 0 101 -4,-0.3 4,-0.4 1,-0.2 -1,-0.2 0.989 122.7 10.4 -55.7 -71.4 22.6 -0.4 -2.5 28 28 A R H < S+ 0 0 171 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.386 124.8 67.2 -90.5 -0.0 24.2 2.6 -0.8 29 29 A L H < S+ 0 0 120 -4,-2.4 -3,-0.2 -5,-0.3 -1,-0.2 0.794 102.6 39.0 -91.0 -32.5 25.2 0.7 2.3 30 30 A V < + 0 0 87 -4,-1.4 -3,-0.1 -5,-0.3 -2,-0.1 0.942 58.3 134.9 -80.8 -82.2 27.8 -1.7 0.9 31 31 A L + 0 0 102 -4,-0.4 3,-0.1 -5,-0.4 -1,-0.1 0.823 28.6 150.1 31.8 47.1 29.9 0.1 -1.7 32 32 A R + 0 0 167 1,-0.2 2,-2.5 2,-0.1 -1,-0.1 0.977 14.4 167.9 -68.4 -58.6 32.9 -1.5 -0.0 33 33 A C 0 0 125 1,-0.2 -1,-0.2 0, 0.0 -2,-0.1 -0.106 360.0 360.0 71.6 -44.3 35.1 -1.8 -3.1 34 34 A S 0 0 144 -2,-2.5 -1,-0.2 -3,-0.1 -2,-0.1 0.032 360.0 360.0 -66.9 360.0 37.9 -2.7 -0.7