==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 03-MAY-07 2JPB . COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN OMPR; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR X.LIAO,L.KENNEY,W.LIAO,INTEGRATED CENTER FOR STRUCTURE AND . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6982.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 15.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 24.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 136 A A 0 0 139 0, 0.0 11,-0.1 0, 0.0 10,-0.0 0.000 360.0 360.0 360.0-146.1 -11.7 -7.9 -4.6 2 137 A V - 0 0 72 9,-0.1 2,-0.5 1,-0.1 9,-0.3 0.035 360.0-124.0 -57.5 173.9 -9.7 -8.4 -1.5 3 138 A I E +A 10 0A 32 7,-2.3 7,-2.0 2,-0.0 2,-0.3 -0.933 34.5 168.7-131.3 107.7 -6.0 -9.0 -1.6 4 139 A A E -A 9 0A 62 -2,-0.5 5,-0.3 5,-0.3 2,-0.2 -0.890 12.0-162.4-119.4 149.7 -4.6 -12.1 0.1 5 140 A F - 0 0 29 3,-4.4 -2,-0.0 -2,-0.3 5,-0.0 -0.618 45.3 -82.0-120.7-179.8 -1.2 -13.6 -0.1 6 141 A G S S- 0 0 85 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.774 127.9 -7.9 -53.0 -28.0 0.5 -17.0 0.6 7 142 A K S S+ 0 0 150 1,-0.1 13,-1.6 11,-0.0 -1,-0.1 0.524 124.2 78.1-134.7 -47.6 0.6 -15.7 4.2 8 143 A F E - B 0 19A 37 11,-0.2 -3,-4.4 69,-0.1 2,-0.4 -0.304 60.0-160.9 -69.8 154.6 -0.5 -12.1 4.2 9 144 A K E +AB 4 18A 106 9,-2.7 9,-3.2 -5,-0.3 2,-0.3 -0.994 13.7 168.3-142.7 131.7 -4.1 -11.2 4.0 10 145 A L E +A 3 0A 5 -7,-2.0 -7,-2.3 -2,-0.4 2,-0.3 -0.980 7.0 177.2-142.6 151.8 -5.7 -7.9 3.0 11 146 A N > - 0 0 30 -2,-0.3 5,-1.8 -9,-0.3 4,-0.5 -0.862 15.1-172.7-160.0 119.9 -9.3 -6.8 2.1 12 147 A L T 5S+ 0 0 32 -2,-0.3 -1,-0.1 2,-0.2 -10,-0.1 0.895 90.1 61.8 -78.3 -43.9 -10.5 -3.3 1.3 13 148 A G T 5S+ 0 0 77 1,-0.3 -1,-0.2 2,-0.1 -2,-0.0 0.790 124.8 21.7 -51.8 -30.1 -14.2 -4.3 1.3 14 149 A T T 5S- 0 0 86 2,-0.1 -1,-0.3 0, 0.0 -2,-0.2 0.427 99.6-137.1-115.2 -7.2 -13.6 -5.2 4.9 15 150 A R T 5 + 0 0 107 -4,-0.5 11,-0.6 1,-0.2 2,-0.4 0.918 59.0 132.7 47.1 53.0 -10.6 -3.0 5.5 16 151 A E E < + C 0 25A 93 -5,-1.8 2,-0.4 9,-0.1 -1,-0.2 -0.945 30.4 177.8-139.3 114.8 -8.9 -5.8 7.4 17 152 A M E + C 0 24A 0 7,-1.7 7,-3.2 -2,-0.4 2,-0.3 -0.928 8.1 157.8-119.7 142.2 -5.3 -6.9 6.8 18 153 A F E -BC 9 23A 56 -9,-3.2 -9,-2.7 -2,-0.4 2,-0.5 -0.986 33.2-135.9-157.6 157.4 -3.3 -9.6 8.6 19 154 A R E > S-BC 8 22A 69 3,-0.8 3,-0.9 -2,-0.3 -11,-0.2 -0.892 90.6 -24.0-123.9 99.7 -0.3 -11.9 8.2 20 155 A E T 3 S- 0 0 142 -13,-1.6 -12,-0.1 -2,-0.5 -1,-0.0 0.069 133.7 -42.6 88.9 -23.7 -0.9 -15.4 9.4 21 156 A D T 3 S+ 0 0 118 1,-0.3 -1,-0.2 -12,-0.1 -13,-0.0 -0.005 97.8 134.0 156.7 -31.7 -3.6 -14.2 11.7 22 157 A E E < -C 19 0A 114 -3,-0.9 -3,-0.8 1,-0.1 2,-0.4 -0.263 53.4-138.2 -49.6 106.0 -2.2 -11.0 13.2 23 158 A P E -C 18 0A 78 0, 0.0 -5,-0.2 0, 0.0 -1,-0.1 -0.591 24.0-174.5 -75.0 122.8 -5.1 -8.6 12.8 24 159 A M E -C 17 0A 44 -7,-3.2 -7,-1.7 -2,-0.4 2,-0.2 -0.980 18.5-134.9-125.2 122.5 -3.9 -5.2 11.6 25 160 A P E -C 16 0A 112 0, 0.0 2,-0.6 0, 0.0 -9,-0.1 -0.503 11.4-155.3 -74.9 139.5 -6.2 -2.1 11.3 26 161 A L - 0 0 2 -11,-0.6 6,-0.1 -2,-0.2 -2,-0.0 -0.866 13.3-148.1-119.9 95.1 -5.9 -0.1 8.1 27 162 A T > - 0 0 58 -2,-0.6 4,-3.3 4,-0.1 5,-0.4 -0.005 32.9 -97.3 -54.1 164.9 -7.0 3.5 8.7 28 163 A S H > S+ 0 0 22 1,-0.2 4,-4.0 2,-0.2 5,-0.4 0.933 126.3 48.7 -50.1 -54.0 -8.6 5.4 5.9 29 164 A G H > S+ 0 0 6 30,-0.3 4,-3.0 2,-0.2 -1,-0.2 0.941 118.4 39.2 -51.6 -56.0 -5.3 7.1 5.1 30 165 A E H > S+ 0 0 51 2,-0.2 4,-3.1 1,-0.2 5,-0.3 0.988 121.7 41.1 -58.4 -66.0 -3.4 3.8 5.1 31 166 A F H X S+ 0 0 32 -4,-3.3 4,-4.3 1,-0.3 5,-0.3 0.910 117.6 49.0 -48.0 -51.4 -6.1 1.7 3.4 32 167 A A H X S+ 0 0 3 -4,-4.0 4,-2.3 -5,-0.4 -1,-0.3 0.914 112.6 49.4 -55.7 -46.1 -6.8 4.5 1.0 33 168 A V H X S+ 0 0 3 -4,-3.0 4,-1.4 -5,-0.4 3,-0.3 0.980 118.3 36.9 -56.6 -62.9 -3.1 4.9 0.3 34 169 A L H >X S+ 0 0 5 -4,-3.1 4,-2.9 1,-0.2 3,-1.0 0.953 112.5 58.8 -54.2 -55.2 -2.6 1.2 -0.3 35 170 A K H 3X S+ 0 0 51 -4,-4.3 4,-0.8 -5,-0.3 -1,-0.2 0.861 101.5 57.4 -41.1 -44.6 -5.9 0.8 -2.1 36 171 A A H >X S+ 0 0 3 -4,-2.3 4,-0.9 -3,-0.3 3,-0.7 0.924 109.8 42.4 -53.4 -49.0 -4.6 3.5 -4.5 37 172 A L H X< S+ 0 0 6 -4,-1.4 3,-0.6 -3,-1.0 -1,-0.2 0.871 115.1 49.8 -65.5 -38.1 -1.7 1.2 -5.3 38 173 A V H 3< S+ 0 0 33 -4,-2.9 -1,-0.3 1,-0.2 -2,-0.2 0.536 104.7 62.0 -76.9 -6.7 -4.0 -1.8 -5.4 39 174 A S H << S+ 0 0 49 -4,-0.8 -1,-0.2 -3,-0.7 -2,-0.2 0.716 114.1 30.5 -88.5 -25.6 -6.1 0.4 -7.7 40 175 A H S X< S- 0 0 66 -4,-0.9 3,-1.2 -3,-0.6 57,-0.5 -0.786 78.3-159.7-138.9 91.5 -3.4 0.6 -10.3 41 176 A P T 3 S+ 0 0 74 0, 0.0 57,-0.2 0, 0.0 -3,-0.1 -0.573 81.7 9.2 -75.0 127.7 -1.1 -2.4 -10.5 42 177 A R T 3 S+ 0 0 148 55,-2.2 56,-0.1 -2,-0.4 54,-0.1 0.806 96.5 130.9 73.8 31.3 2.2 -1.7 -12.1 43 178 A E < - 0 0 87 -3,-1.2 2,-0.5 -6,-0.2 -1,-0.2 -0.894 47.1-153.0-122.4 99.9 1.4 2.0 -12.2 44 179 A P + 0 0 50 0, 0.0 2,-0.3 0, 0.0 52,-0.2 -0.599 22.3 175.2 -74.9 120.0 4.2 4.2 -10.8 45 180 A L B -D 95 0B 51 50,-1.5 50,-1.9 -2,-0.5 45,-0.2 -0.943 32.7-101.9-127.5 148.5 2.8 7.4 -9.4 46 181 A S > - 0 0 53 -2,-0.3 4,-1.7 48,-0.2 48,-0.2 -0.113 37.9-105.0 -61.3 163.6 4.5 10.3 -7.6 47 182 A R H > S+ 0 0 147 46,-0.3 4,-1.6 1,-0.2 5,-0.2 0.779 123.1 54.9 -61.2 -27.4 4.2 10.6 -3.8 48 183 A D H > S+ 0 0 113 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.959 106.8 46.2 -70.0 -53.6 1.8 13.4 -4.4 49 184 A K H > S+ 0 0 115 2,-0.2 4,-2.9 1,-0.2 5,-0.3 0.771 107.1 65.8 -59.3 -25.9 -0.5 11.3 -6.6 50 185 A L H X S+ 0 0 4 -4,-1.7 4,-1.8 2,-0.2 -2,-0.2 0.994 112.6 26.7 -58.4 -69.2 -0.2 8.7 -4.0 51 186 A M H X S+ 0 0 36 -4,-1.6 4,-1.4 1,-0.2 -2,-0.2 0.786 118.8 64.3 -64.8 -28.6 -1.9 10.6 -1.2 52 187 A N H >< S+ 0 0 77 -4,-2.8 3,-0.7 2,-0.2 -2,-0.2 0.976 103.0 44.6 -58.2 -59.8 -3.9 12.4 -3.8 53 188 A L H 3< S+ 0 0 61 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.927 115.5 47.9 -49.7 -51.7 -5.7 9.3 -5.1 54 189 A A H 3< S+ 0 0 4 -4,-1.8 2,-1.5 -5,-0.3 -1,-0.3 0.758 99.6 77.3 -61.1 -24.5 -6.3 8.3 -1.5 55 190 A R << + 0 0 118 -4,-1.4 -1,-0.2 -3,-0.7 4,-0.1 -0.619 64.0 116.2 -89.7 77.7 -7.5 11.8 -1.0 56 191 A G S S- 0 0 52 -2,-1.5 -1,-0.1 2,-0.1 -2,-0.1 0.722 88.4 -48.1-104.3 -91.1 -10.9 11.6 -2.6 57 192 A R S S+ 0 0 250 -3,-0.2 3,-0.2 2,-0.0 4,-0.2 0.712 107.0 85.3-116.7 -54.6 -13.9 12.1 -0.4 58 193 A E S S- 0 0 96 1,-0.2 2,-2.1 2,-0.1 -2,-0.1 0.051 106.8 -70.7 -47.0 162.4 -13.5 10.0 2.7 59 194 A Y S S+ 0 0 165 1,-0.2 -30,-0.3 -4,-0.1 -1,-0.2 -0.387 98.3 112.3 -61.9 82.8 -11.5 11.5 5.6 60 195 A S + 0 0 11 -2,-2.1 2,-0.3 -3,-0.2 -1,-0.2 0.064 42.3 95.5-142.4 21.6 -8.2 11.3 3.9 61 196 A A S S+ 0 0 39 -4,-0.2 3,-0.1 1,-0.1 -2,-0.1 -0.525 85.6 41.5-114.8 61.4 -7.4 15.0 3.4 62 197 A M S S+ 0 0 127 -2,-0.3 2,-2.0 -3,-0.1 -1,-0.1 0.223 85.9 82.9-165.6 -45.2 -5.3 15.6 6.4 63 198 A E - 0 0 108 1,-0.1 2,-1.8 -4,-0.1 -1,-0.0 -0.561 58.3-174.5 -79.5 80.5 -2.9 12.8 7.0 64 199 A R + 0 0 162 -2,-2.0 2,-0.3 -3,-0.1 -1,-0.1 -0.595 35.3 122.5 -80.2 84.5 -0.2 13.9 4.6 65 200 A S + 0 0 32 -2,-1.8 -2,-0.1 1,-0.1 -3,-0.0 -0.966 9.8 136.5-150.2 129.1 2.1 10.9 4.8 66 201 A I S > S+ 0 0 11 -2,-0.3 4,-4.4 3,-0.1 5,-0.4 0.517 78.0 51.4-135.5 -46.6 3.4 8.5 2.1 67 202 A D H > S+ 0 0 112 2,-0.2 4,-1.5 1,-0.2 5,-0.1 0.890 122.0 36.1 -64.4 -40.7 7.1 7.9 2.8 68 203 A V H > S+ 0 0 67 2,-0.2 4,-1.4 3,-0.1 -1,-0.2 0.814 122.2 47.1 -80.3 -33.4 6.3 7.1 6.4 69 204 A Q H > S+ 0 0 19 2,-0.2 4,-2.2 3,-0.1 -2,-0.2 0.952 113.0 46.6 -71.7 -52.6 3.1 5.4 5.4 70 205 A I H >X S+ 0 0 4 -4,-4.4 4,-3.8 2,-0.2 3,-0.5 0.958 109.8 53.9 -53.3 -57.4 4.5 3.3 2.6 71 206 A S H 3X S+ 0 0 47 -4,-1.5 4,-1.0 -5,-0.4 -1,-0.2 0.886 112.5 44.6 -43.4 -48.7 7.5 2.2 4.7 72 207 A R H 3X S+ 0 0 167 -4,-1.4 4,-2.0 1,-0.2 -1,-0.3 0.821 114.2 50.0 -66.5 -32.3 5.0 1.0 7.3 73 208 A L H S- 0 0 104 3,-0.2 2,-2.6 -6,-0.1 3,-0.8 -0.879 77.3-155.8-104.6 105.4 11.6 -6.9 6.1 81 216 A P T 3 S+ 0 0 65 0, 0.0 -6,-0.1 0, 0.0 -2,-0.1 -0.275 87.4 58.0 -75.1 54.4 11.3 -3.3 4.9 82 217 A A T 3 S+ 0 0 77 -2,-2.6 -3,-0.0 -8,-0.2 -7,-0.0 0.417 103.6 40.3-145.1 -46.5 14.2 -3.9 2.5 83 218 A H S < S+ 0 0 165 -3,-0.8 -3,-0.2 -5,-0.0 -4,-0.0 -0.745 76.0 166.6-117.1 80.9 13.3 -6.8 0.2 84 219 A P - 0 0 37 0, 0.0 4,-0.1 0, 0.0 -9,-0.0 0.208 23.3-165.4 -74.9-159.5 9.6 -6.3 -0.7 85 220 A R S S+ 0 0 141 -11,-0.0 13,-0.1 -7,-0.0 -7,-0.0 0.291 84.2 35.4-155.7 -51.9 7.7 -8.0 -3.4 86 221 A Y S S+ 0 0 50 13,-0.1 2,-0.4 1,-0.1 15,-0.0 0.103 112.1 68.6-101.7 19.4 4.4 -6.3 -4.1 87 222 A I + 0 0 4 11,-0.2 2,-0.6 10,-0.2 10,-0.2 -0.923 53.5 176.9-143.7 112.9 5.8 -2.9 -3.4 88 223 A Q E -E 96 0B 70 8,-2.9 8,-1.7 -2,-0.4 2,-0.4 -0.819 14.7-161.1-119.9 89.5 8.4 -1.2 -5.7 89 224 A T E -E 95 0B 35 -2,-0.6 2,-0.5 6,-0.2 6,-0.2 -0.572 7.1-167.2 -73.2 123.1 9.2 2.2 -4.4 90 225 A V - 0 0 38 4,-0.6 4,-0.1 -2,-0.4 -2,-0.0 -0.962 17.0-163.5-117.7 119.5 10.8 4.3 -7.2 91 226 A W S S+ 0 0 208 -2,-0.5 -1,-0.2 1,-0.2 4,-0.0 0.936 96.7 49.4 -62.6 -47.7 12.4 7.6 -6.2 92 227 A G S S+ 0 0 72 2,-0.1 -1,-0.2 -46,-0.1 -46,-0.0 0.918 131.6 17.4 -56.7 -48.0 12.3 8.7 -9.9 93 228 A L S S- 0 0 86 1,-0.1 -46,-0.3 -48,-0.1 -2,-0.2 0.914 99.2-125.3 -87.1 -81.6 8.7 7.8 -10.2 94 229 A G - 0 0 3 -48,-0.2 -4,-0.6 -6,-0.2 2,-0.3 -0.385 66.1 -7.4 169.8 -80.6 7.2 7.5 -6.7 95 230 A Y E +DE 45 89B 9 -50,-1.9 -50,-1.5 -6,-0.2 2,-0.3 -0.907 57.0 179.4-152.1 118.7 5.4 4.3 -5.8 96 231 A V E - E 0 88B 2 -8,-1.7 -8,-2.9 -2,-0.3 2,-0.6 -0.880 19.3-144.2-119.8 151.7 4.5 1.3 -8.0 97 232 A F + 0 0 14 -57,-0.5 -55,-2.2 -2,-0.3 -10,-0.2 -0.880 21.5 172.8-120.1 98.4 2.8 -1.9 -7.1 98 233 A V - 0 0 1 -2,-0.6 2,-0.3 -57,-0.2 -11,-0.2 -0.892 20.4-150.6-109.5 103.1 4.2 -4.9 -9.1 99 234 A P S S- 0 0 59 0, 0.0 2,-2.0 0, 0.0 -13,-0.1 -0.547 78.5 -6.3 -74.9 132.5 2.6 -8.2 -7.8 100 235 A D S S- 0 0 127 -2,-0.3 -14,-0.1 2,-0.1 -2,-0.1 -0.323 116.4 -93.7 81.7 -54.4 4.8 -11.2 -8.2 101 236 A G + 0 0 44 -2,-2.0 -15,-0.1 2,-0.1 3,-0.0 0.216 61.5 151.5 112.6 127.4 7.4 -9.1 -10.1 102 237 A S S S- 0 0 97 -2,-0.0 2,-0.3 -4,-0.0 -2,-0.1 0.380 71.3 -16.0-144.2 -62.7 7.9 -8.6 -13.8 103 238 A K 0 0 150 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.845 360.0 360.0-161.1 118.6 9.4 -5.2 -14.6 104 239 A A 0 0 75 -2,-0.3 -6,-0.0 -6,-0.0 -16,-0.0 0.342 360.0 360.0 -59.6 360.0 9.7 -2.1 -12.4