==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 15-MAY-07 2JPJ . COMPND 2 MOLECULE: BACTERIOCIN LACTOCOCCIN-G SUBUNIT ALPHA; . SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; . AUTHOR P.ROGNE,G.FIMLAND,J.NISSEN-MEYER,P.E.KRISTIANSEN . 39 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4378.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 82.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 56.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 90 0, 0.0 3,-2.0 0, 0.0 4,-0.3 0.000 360.0 360.0 360.0 141.5 -20.7 -3.9 10.5 2 2 A T T >> + 0 0 98 1,-0.3 4,-3.3 2,-0.2 3,-0.8 0.698 360.0 88.3 -60.3 -18.0 -19.5 -0.4 10.4 3 3 A W H 3> S+ 0 0 209 1,-0.3 4,-1.8 2,-0.2 -1,-0.3 0.791 79.1 63.7 -51.0 -29.1 -16.6 -1.8 8.3 4 4 A D H <> S+ 0 0 126 -3,-2.0 4,-0.8 2,-0.2 -1,-0.3 0.941 114.3 28.4 -62.0 -49.5 -18.9 -1.2 5.3 5 5 A D H <> S+ 0 0 118 -3,-0.8 4,-1.4 -4,-0.3 3,-0.5 0.907 121.3 52.6 -78.5 -45.2 -19.0 2.6 5.8 6 6 A I H X S+ 0 0 88 -4,-3.3 4,-1.9 1,-0.2 -3,-0.2 0.796 109.7 51.8 -61.2 -28.4 -15.6 2.9 7.4 7 7 A G H X S+ 0 0 39 -4,-1.8 4,-1.0 -5,-0.4 -1,-0.2 0.783 103.6 56.4 -79.0 -28.1 -14.2 0.9 4.4 8 8 A Q H X S+ 0 0 144 -4,-0.8 4,-0.9 -3,-0.5 -2,-0.2 0.809 114.0 40.0 -72.6 -30.6 -15.8 3.2 1.9 9 9 A G H X S+ 0 0 32 -4,-1.4 4,-3.2 2,-0.2 3,-0.5 0.952 112.2 50.4 -82.5 -56.6 -14.0 6.3 3.4 10 10 A I H X S+ 0 0 111 -4,-1.9 4,-2.5 1,-0.2 -2,-0.2 0.794 106.9 61.5 -52.4 -29.2 -10.6 4.9 4.2 11 11 A G H X S+ 0 0 47 -4,-1.0 4,-0.6 2,-0.2 -1,-0.2 0.954 114.0 29.8 -63.8 -51.8 -10.5 3.7 0.6 12 12 A R H X S+ 0 0 206 -4,-0.9 4,-0.7 -3,-0.5 3,-0.3 0.819 122.0 53.0 -77.4 -32.7 -10.8 7.1 -1.0 13 13 A V H >X S+ 0 0 84 -4,-3.2 4,-2.7 1,-0.2 3,-1.1 0.887 98.2 63.6 -69.4 -40.4 -9.0 8.8 1.9 14 14 A A H 3X S+ 0 0 52 -4,-2.5 4,-1.7 -5,-0.3 -1,-0.2 0.818 101.0 53.8 -53.2 -32.3 -6.0 6.5 1.7 15 15 A Y H 3X S+ 0 0 186 -4,-0.6 4,-0.9 -3,-0.3 -1,-0.3 0.801 110.1 46.6 -73.5 -29.6 -5.4 7.8 -1.8 16 16 A W H S+ 0 0 14 -4,-1.7 4,-1.8 -5,-0.3 5,-0.9 0.935 109.7 33.2 -51.6 -53.4 -0.7 8.7 0.4 19 19 A K H <5S+ 0 0 134 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.2 0.813 112.0 64.5 -73.8 -31.0 0.4 11.8 -1.6 20 20 A A H <5S+ 0 0 73 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.823 112.7 34.8 -61.1 -31.9 -0.0 14.0 1.4 21 21 A L H <5S- 0 0 136 -4,-2.0 -1,-0.2 -3,-0.3 -2,-0.2 0.779 125.4 -97.8 -92.0 -32.6 2.8 12.1 3.1 22 22 A G T <5 - 0 0 40 -4,-1.8 -3,-0.2 -5,-0.3 -4,-0.1 0.036 40.1-117.1 138.8 -28.1 4.8 11.4 -0.0 23 23 A N S > S+ 0 0 95 2,-0.1 3,-1.0 3,-0.1 4,-0.7 0.864 80.3 50.3 -93.7 -47.0 6.5 3.1 1.9 26 26 A D H >> S+ 0 0 125 1,-0.3 4,-1.2 2,-0.2 3,-0.7 0.837 105.0 60.5 -61.0 -33.2 6.0 0.1 -0.3 27 27 A V H 3> S+ 0 0 92 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.782 92.4 67.4 -65.4 -26.9 9.2 1.0 -2.2 28 28 A N H <4 S+ 0 0 117 -3,-1.0 -1,-0.2 1,-0.2 3,-0.2 0.864 102.9 44.6 -61.4 -37.1 11.1 0.7 1.1 29 29 A Q H X< S+ 0 0 124 -3,-0.7 3,-1.7 -4,-0.7 -1,-0.2 0.797 103.2 64.9 -77.2 -30.0 10.5 -3.0 1.1 30 30 A A H >X S+ 0 0 31 -4,-1.2 3,-2.8 1,-0.3 4,-0.6 0.786 84.0 75.8 -63.0 -27.3 11.3 -3.3 -2.6 31 31 A S H 3X S+ 0 0 59 -4,-1.1 4,-1.5 1,-0.3 -1,-0.3 0.748 82.0 69.4 -56.3 -23.2 14.9 -2.3 -1.7 32 32 A R H <4 S+ 0 0 178 -3,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.676 119.0 18.5 -69.4 -16.9 15.3 -5.8 -0.4 33 33 A I H <4 S+ 0 0 108 -3,-2.8 -2,-0.2 -4,-0.2 -1,-0.2 0.168 121.8 62.0-137.4 14.1 15.1 -7.0 -4.0 34 34 A N H >< S+ 0 0 56 -4,-0.6 3,-1.6 -3,-0.2 -3,-0.2 0.630 82.7 74.7-112.5 -25.7 15.9 -3.8 -5.9 35 35 A R G >< S+ 0 0 209 -4,-1.5 3,-1.1 1,-0.3 -3,-0.1 0.778 88.7 64.9 -59.2 -26.5 19.4 -3.1 -4.6 36 36 A K G 3 S+ 0 0 155 1,-0.3 -1,-0.3 -5,-0.1 -2,-0.1 0.793 116.3 27.0 -67.2 -28.1 20.6 -5.9 -6.9 37 37 A K G < S+ 0 0 138 -3,-1.6 -1,-0.3 1,-0.1 -2,-0.2 -0.199 87.0 111.6-127.4 40.7 19.5 -3.8 -9.9 38 38 A K < 0 0 145 -3,-1.1 -1,-0.1 -7,-0.1 -3,-0.1 -0.048 360.0 360.0-103.1 30.2 19.9 -0.3 -8.4 39 39 A H 0 0 237 -3,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.132 360.0 360.0 -83.7 360.0 22.9 0.5 -10.7