==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID BINDING PROTEIN 28-MAY-07 2JQ3 . COMPND 2 MOLECULE: APOLIPOPROTEIN C-III; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.S.GANGABADAGE,J.ZDUNEK,M.TESSARI,S.NILSSON,G.OLIVECRONA, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8446.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 82.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 26 32.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 182 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 128.3 1.5 -27.1 12.9 2 2 A E - 0 0 163 4,-0.0 2,-0.7 0, 0.0 3,-0.0 -0.965 360.0 -91.8-163.5 145.5 1.5 -23.4 12.1 3 3 A A > - 0 0 74 -2,-0.3 3,-1.1 1,-0.2 0, 0.0 -0.461 29.5-163.4 -64.2 108.3 -0.9 -20.4 12.3 4 4 A E T 3 S+ 0 0 181 -2,-0.7 -1,-0.2 1,-0.3 0, 0.0 0.691 83.2 75.4 -66.1 -17.7 -2.4 -20.3 8.8 5 5 A D T 3 S+ 0 0 153 2,-0.0 -1,-0.3 -3,-0.0 -2,-0.1 0.878 70.7 99.5 -61.9 -38.8 -3.5 -16.8 9.6 6 6 A A S < S- 0 0 51 -3,-1.1 4,-0.0 1,-0.1 -4,-0.0 -0.302 74.3-135.2 -55.2 123.5 0.0 -15.5 9.2 7 7 A S > - 0 0 80 1,-0.1 3,-2.9 3,-0.1 4,-0.2 -0.110 38.4 -78.6 -72.9 175.4 0.2 -14.0 5.7 8 8 A L T 3> S+ 0 0 137 1,-0.3 4,-0.7 2,-0.1 -1,-0.1 0.516 122.8 82.0 -55.2 -1.1 3.0 -14.6 3.2 9 9 A L H 3> S+ 0 0 90 1,-0.2 4,-2.7 2,-0.1 -1,-0.3 0.546 73.1 79.2 -81.3 -8.2 4.9 -12.1 5.4 10 10 A S H <> S+ 0 0 52 -3,-2.9 4,-2.4 2,-0.2 5,-0.4 0.992 89.2 46.5 -63.3 -65.3 5.7 -14.9 7.8 11 11 A F H > S+ 0 0 165 -4,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.898 120.6 42.1 -44.5 -48.8 8.6 -16.5 6.0 12 12 A M H X S+ 0 0 110 -4,-0.7 4,-1.7 2,-0.2 5,-0.5 0.995 108.4 55.4 -63.8 -65.3 10.1 -13.0 5.4 13 13 A Q H X S+ 0 0 128 -4,-2.7 4,-1.1 1,-0.3 -2,-0.2 0.852 117.7 38.0 -33.5 -54.1 9.5 -11.5 8.9 14 14 A G H X S+ 0 0 33 -4,-2.4 4,-3.6 -5,-0.2 -1,-0.3 0.857 108.1 66.7 -69.8 -36.3 11.3 -14.4 10.4 15 15 A Y H X S+ 0 0 158 -4,-2.0 4,-4.3 -5,-0.4 5,-0.4 0.962 105.2 40.1 -49.0 -63.9 13.9 -14.5 7.6 16 16 A M H X S+ 0 0 118 -4,-1.7 4,-1.1 1,-0.2 -1,-0.3 0.854 114.9 56.9 -56.5 -31.1 15.4 -11.2 8.5 17 17 A K H < S+ 0 0 155 -4,-1.1 -2,-0.2 -5,-0.5 -1,-0.2 0.949 117.9 31.0 -63.6 -48.3 15.0 -12.3 12.1 18 18 A H H >< S+ 0 0 120 -4,-3.6 3,-3.0 1,-0.2 4,-0.5 0.918 114.9 57.3 -75.9 -48.7 17.1 -15.4 11.5 19 19 A A H >< S+ 0 0 33 -4,-4.3 3,-0.8 1,-0.3 4,-0.3 0.755 93.6 71.2 -57.8 -20.7 19.5 -14.2 8.8 20 20 A T G >< S+ 0 0 95 -4,-1.1 3,-0.9 -5,-0.4 -1,-0.3 0.743 87.0 66.9 -66.5 -19.3 20.4 -11.5 11.2 21 21 A K G X S+ 0 0 129 -3,-3.0 3,-1.2 1,-0.2 4,-0.5 0.874 86.7 65.2 -67.1 -39.0 22.2 -14.4 13.1 22 22 A T G <> S+ 0 0 80 -3,-0.8 4,-3.5 -4,-0.5 5,-0.3 0.657 78.6 89.7 -59.5 -14.2 24.7 -14.8 10.2 23 23 A A H <> S+ 0 0 58 -3,-0.9 4,-4.4 -4,-0.3 -1,-0.3 0.919 85.4 49.6 -48.7 -51.3 25.9 -11.3 11.2 24 24 A K H <> S+ 0 0 146 -3,-1.2 4,-3.0 -4,-0.3 5,-0.4 0.980 115.4 38.8 -50.9 -74.1 28.4 -12.8 13.7 25 25 A D H > S+ 0 0 115 -4,-0.5 4,-1.0 1,-0.3 -1,-0.2 0.888 122.3 46.6 -47.2 -41.6 30.0 -15.4 11.4 26 26 A A H < S+ 0 0 52 -4,-3.5 -1,-0.3 2,-0.2 -2,-0.3 0.899 109.5 54.7 -67.7 -40.6 29.8 -12.8 8.7 27 27 A L H >< S+ 0 0 120 -4,-4.4 3,-2.6 -5,-0.3 -2,-0.2 0.934 104.4 52.2 -59.3 -46.6 31.2 -10.2 11.0 28 28 A S H >< S+ 0 0 95 -4,-3.0 3,-0.6 1,-0.3 -1,-0.3 0.827 99.3 66.7 -58.9 -28.7 34.2 -12.3 11.8 29 29 A S G >< + 0 0 73 -4,-1.0 3,-0.9 -5,-0.4 -1,-0.3 0.447 64.7 111.6 -71.6 1.8 34.6 -12.5 8.0 30 30 A V G X + 0 0 70 -3,-2.6 3,-4.2 1,-0.3 -1,-0.2 0.494 33.7 119.5 -56.0 0.9 35.3 -8.7 8.1 31 31 A Q G X + 0 0 143 -3,-0.6 3,-1.4 1,-0.3 -1,-0.3 0.672 57.6 78.1 -43.9 -13.2 38.9 -9.8 7.1 32 32 A E G X + 0 0 161 -3,-0.9 3,-2.0 1,-0.3 -1,-0.3 0.559 65.4 92.2 -74.4 -4.7 38.0 -7.6 4.1 33 33 A S G X + 0 0 77 -3,-4.2 3,-1.4 1,-0.3 -1,-0.3 0.700 57.6 89.4 -60.8 -17.8 38.8 -4.7 6.4 34 34 A Q G X + 0 0 130 -3,-1.4 3,-1.3 1,-0.3 4,-0.4 0.668 52.7 105.4 -55.0 -12.3 42.3 -5.0 5.0 35 35 A V G X> + 0 0 73 -3,-2.0 4,-2.4 1,-0.3 3,-0.5 0.623 51.8 95.8 -46.7 -7.7 40.9 -2.5 2.5 36 36 A A H <> S+ 0 0 54 -3,-1.4 4,-3.3 1,-0.3 5,-0.5 0.958 76.6 53.6 -46.6 -65.6 43.0 -0.1 4.5 37 37 A Q H <4 S+ 0 0 160 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.840 108.9 52.8 -40.0 -38.5 45.9 -0.4 2.0 38 38 A Q H X> S+ 0 0 131 -3,-0.5 3,-2.5 -4,-0.4 4,-1.5 0.992 111.4 42.9 -62.2 -59.5 43.3 0.5 -0.6 39 39 A A H 3X S+ 0 0 62 -4,-2.4 4,-0.7 1,-0.3 3,-0.4 0.958 112.8 52.3 -48.1 -55.9 42.2 3.6 1.3 40 40 A R H 3< S+ 0 0 191 -4,-3.3 4,-0.4 1,-0.2 -1,-0.3 0.601 104.9 64.5 -58.0 -5.4 45.9 4.4 1.9 41 41 A G H X> S+ 0 0 25 -3,-2.5 3,-2.4 -5,-0.5 4,-0.9 0.953 86.5 61.3 -79.3 -60.8 46.0 3.9 -1.8 42 42 A W H 3<>S+ 0 0 156 -4,-1.5 5,-1.5 -3,-0.4 -2,-0.2 0.687 91.3 75.9 -43.6 -18.2 43.8 6.9 -2.9 43 43 A V T ><5S+ 0 0 75 -4,-0.7 3,-1.9 3,-0.2 -1,-0.3 0.939 93.1 47.9 -60.1 -48.5 46.5 8.9 -1.1 44 44 A T T <45S+ 0 0 116 -3,-2.4 -1,-0.2 -4,-0.4 -2,-0.2 0.890 106.4 57.5 -60.5 -39.5 48.9 8.5 -4.1 45 45 A D T 3<5S- 0 0 114 -4,-0.9 -1,-0.3 1,-0.1 -2,-0.2 0.298 127.0-103.6 -75.7 13.8 46.1 9.4 -6.5 46 46 A G T X 5 - 0 0 32 -3,-1.9 3,-2.7 1,-0.1 -3,-0.2 0.965 42.5-171.0 64.4 54.5 45.9 12.7 -4.5 47 47 A F T > > + 0 0 55 1,-0.3 3,-2.8 -5,-0.3 4,-0.7 0.759 59.6 86.3 -46.6 -26.7 43.0 15.5 -1.5 49 49 A S H <> S+ 0 0 72 -3,-2.7 4,-1.0 1,-0.3 -1,-0.3 0.646 80.7 64.1 -53.3 -9.3 40.8 16.1 -4.5 50 50 A L H <> S+ 0 0 106 -3,-2.8 4,-4.1 3,-0.2 -1,-0.3 0.814 93.1 61.7 -82.0 -32.1 38.1 15.3 -2.0 51 51 A K H <>>S+ 0 0 123 -3,-2.8 4,-5.1 -4,-0.3 5,-0.5 0.989 105.1 42.0 -55.8 -70.9 39.0 18.4 0.0 52 52 A D H X5S+ 0 0 93 -4,-0.7 4,-2.0 1,-0.3 -1,-0.2 0.921 123.0 41.3 -42.2 -56.7 38.3 21.1 -2.6 53 53 A Y H X5S+ 0 0 157 -4,-1.0 4,-2.2 2,-0.2 5,-0.3 0.914 121.8 42.3 -60.4 -43.7 35.1 19.3 -3.6 54 54 A W H X>S+ 0 0 152 -4,-4.1 4,-1.9 2,-0.2 5,-0.6 0.974 111.7 52.6 -66.8 -55.1 34.3 18.5 0.0 55 55 A S H X5S+ 0 0 66 -4,-5.1 4,-1.0 -5,-0.2 -1,-0.2 0.832 117.3 43.0 -49.7 -33.8 35.2 22.0 1.3 56 56 A T H X<5S+ 0 0 126 -4,-1.9 3,-1.1 -5,-0.3 4,-0.4 0.937 120.4 38.5 -44.8 -59.8 29.8 20.9 2.5 59 59 A D H ><4 S+ 0 0 128 -4,-0.5 3,-0.7 1,-0.2 -2,-0.2 0.795 103.5 76.4 -75.9 -31.7 23.7 28.4 0.5 64 64 A F G 3< S+ 0 0 155 -4,-3.3 -1,-0.2 1,-0.2 -2,-0.1 0.587 87.8 66.9 -58.6 -4.9 22.4 25.4 -1.5 65 65 A W G < S+ 0 0 210 -3,-0.7 2,-0.7 1,-0.2 -1,-0.2 0.943 93.9 56.0 -79.8 -51.1 19.4 25.7 0.7 66 66 A D S < S- 0 0 115 -3,-0.7 -1,-0.2 -4,-0.4 2,-0.0 -0.749 76.0-169.8 -87.8 114.0 18.2 29.0 -0.6 67 67 A L - 0 0 68 -2,-0.7 4,-0.2 1,-0.2 -2,-0.1 -0.112 41.0 -50.2 -89.0-172.3 17.6 28.8 -4.4 68 68 A D S S- 0 0 117 2,-0.3 -1,-0.2 1,-0.2 8,-0.0 -0.042 76.1 -80.2 -56.4 165.6 17.0 31.6 -6.8 69 69 A P S S+ 0 0 140 0, 0.0 2,-0.5 0, 0.0 -1,-0.2 0.656 128.1 58.7 -46.2 -11.6 14.1 34.1 -5.9 70 70 A E - 0 0 86 2,-0.1 2,-1.1 5,-0.0 -2,-0.3 -0.927 68.7-169.3-126.5 109.3 12.0 31.3 -7.3 71 71 A V + 0 0 100 -2,-0.5 -5,-0.0 -4,-0.2 3,-0.0 -0.755 33.5 142.3 -97.7 90.8 12.2 27.9 -5.7 72 72 A R > - 0 0 156 -2,-1.1 4,-1.3 1,-0.1 5,-0.2 -0.937 57.1-132.5-127.1 151.9 10.2 25.6 -8.1 73 73 A P H > S+ 0 0 110 0, 0.0 4,-0.9 0, 0.0 5,-0.2 0.709 106.4 51.7 -73.9 -17.7 10.8 22.0 -9.3 74 74 A T H > S+ 0 0 106 2,-0.2 4,-3.2 3,-0.1 5,-0.3 0.972 113.8 33.9 -80.9 -67.7 10.3 23.2 -12.9 75 75 A S H > S+ 0 0 37 1,-0.2 4,-0.9 2,-0.2 -1,-0.1 0.878 117.2 58.7 -58.6 -38.3 12.6 26.2 -13.4 76 76 A A H >< S+ 0 0 36 -4,-1.3 3,-0.6 3,-0.3 -1,-0.2 0.978 114.7 33.1 -54.5 -62.9 15.1 24.6 -11.1 77 77 A V H 3< S+ 0 0 133 -4,-0.9 -2,-0.2 1,-0.3 -1,-0.2 0.948 123.5 46.1 -60.7 -49.2 15.5 21.4 -13.1 78 78 A A H 3< 0 0 84 -4,-3.2 -1,-0.3 -5,-0.2 -2,-0.2 0.606 360.0 360.0 -68.4 -9.3 14.9 23.2 -16.4 79 79 A A << 0 0 114 -4,-0.9 -3,-0.3 -3,-0.6 -4,-0.1 -0.328 360.0 360.0-177.4 360.0 17.4 25.8 -15.0