==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SUGAR BINDING PROTEIN 06-SEP-09 3JQH . COMPND 2 MOLECULE: C-TYPE LECTIN DOMAIN FAMILY 4 MEMBER M; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.FEINBERG,C.K.W.TSO,M.E.TAYLOR,K.DRICKAMER,W.I.WEIS . 23 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2672.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 82.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 69.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 185 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 129.7 3.7 20.5 21.3 2 2 A E >> - 0 0 150 1,-0.1 3,-1.8 0, 0.0 4,-1.1 -0.700 360.0-112.1-107.5 158.7 6.9 18.2 21.4 3 3 A K H 3> S+ 0 0 175 1,-0.3 4,-1.8 -2,-0.2 3,-0.2 0.857 113.0 61.8 -50.7 -44.3 7.7 15.0 23.1 4 4 A S H 3> S+ 0 0 65 1,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.722 99.1 58.3 -61.0 -19.9 10.2 16.5 25.4 5 5 A K H <> S+ 0 0 105 -3,-1.8 4,-2.2 2,-0.2 -1,-0.2 0.946 105.4 45.6 -76.2 -48.7 7.5 18.7 26.9 6 6 A L H X S+ 0 0 124 -4,-1.1 4,-2.9 1,-0.2 -2,-0.2 0.823 111.4 55.0 -63.5 -31.8 5.3 15.9 28.1 7 7 A Q H X S+ 0 0 115 -4,-1.8 4,-2.9 2,-0.2 -1,-0.2 0.913 107.5 48.5 -63.8 -44.3 8.4 14.1 29.5 8 8 A E H X S+ 0 0 106 -4,-1.5 4,-1.9 2,-0.2 -2,-0.2 0.888 112.9 48.7 -66.0 -37.5 9.2 17.2 31.6 9 9 A I H X S+ 0 0 91 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.956 112.4 47.8 -63.7 -48.8 5.6 17.3 32.7 10 10 A Y H X S+ 0 0 156 -4,-2.9 4,-2.0 1,-0.2 -2,-0.2 0.892 110.4 52.7 -58.4 -40.5 5.7 13.6 33.6 11 11 A Q H X S+ 0 0 100 -4,-2.9 4,-1.8 1,-0.2 -1,-0.2 0.861 107.3 51.2 -66.1 -39.7 9.0 14.0 35.4 12 12 A E H X S+ 0 0 113 -4,-1.9 4,-1.5 2,-0.2 -1,-0.2 0.901 107.9 52.8 -59.4 -46.6 7.6 16.9 37.6 13 13 A L H X S+ 0 0 104 -4,-2.1 4,-2.8 1,-0.2 3,-0.3 0.922 106.5 53.8 -55.7 -48.1 4.6 14.7 38.5 14 14 A T H X S+ 0 0 66 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.918 109.4 46.9 -49.5 -49.3 7.1 12.0 39.6 15 15 A R H X S+ 0 0 133 -4,-1.8 4,-1.2 1,-0.2 -1,-0.2 0.722 111.8 52.2 -71.5 -21.5 8.9 14.4 41.9 16 16 A L H X S+ 0 0 105 -4,-1.5 4,-2.0 -3,-0.3 -2,-0.2 0.872 107.0 51.7 -77.4 -41.2 5.5 15.6 43.3 17 17 A K H X S+ 0 0 160 -4,-2.8 4,-1.8 1,-0.2 -2,-0.2 0.919 110.2 49.8 -58.5 -42.1 4.5 12.0 44.1 18 18 A A H < S+ 0 0 61 -4,-1.9 4,-0.3 1,-0.2 -1,-0.2 0.876 108.5 52.2 -68.0 -38.7 7.8 11.5 46.0 19 19 A A H >< S+ 0 0 50 -4,-1.2 3,-1.0 1,-0.2 4,-0.2 0.884 108.3 50.2 -62.8 -43.2 7.4 14.7 48.0 20 20 A V H >< S+ 0 0 84 -4,-2.0 3,-1.9 1,-0.2 -2,-0.2 0.899 103.7 60.3 -64.0 -37.8 3.8 13.7 49.2 21 21 A G T 3< S+ 0 0 68 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.599 102.5 53.6 -65.8 -11.5 5.2 10.3 50.2 22 22 A E T < 0 0 174 -3,-1.0 -1,-0.3 -4,-0.3 -2,-0.2 0.409 360.0 360.0 -99.9 0.5 7.5 12.1 52.6 23 23 A L < 0 0 182 -3,-1.9 -3,-0.0 -4,-0.2 -4,-0.0 -0.415 360.0 360.0 -72.7 360.0 4.7 14.1 54.3