==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 15-AUG-01 1JRU . COMPND 2 MOLECULE: P47 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR X.M.YUAN,A.SHAW,X.D.ZHANG,H.KONDO,J.LALLY,P.S.FREEMONT, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6259.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 7.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 282 A K 0 0 231 0, 0.0 42,-0.1 0, 0.0 41,-0.1 0.000 360.0 360.0 360.0 131.8 50.0 -6.2 8.3 2 283 A A - 0 0 16 40,-0.2 3,-0.4 1,-0.1 38,-0.1 -0.176 360.0-114.7 -47.7 139.2 53.7 -5.4 9.2 3 284 A S + 0 0 28 36,-0.3 2,-4.5 1,-0.2 -1,-0.1 0.948 61.1 149.2 -43.4 -63.7 55.7 -6.2 6.1 4 285 A S + 0 0 36 1,-0.2 2,-0.4 36,-0.1 -1,-0.2 -0.154 62.0 67.6 61.5 -59.1 57.6 -9.1 7.9 5 286 A S + 0 0 86 -2,-4.5 2,-1.2 -3,-0.4 -1,-0.2 0.027 64.5 150.3 -81.3 34.5 57.9 -11.0 4.5 6 287 A I + 0 0 19 -2,-0.4 24,-0.8 33,-0.1 2,-0.3 -0.504 23.0 172.1 -69.2 99.7 60.3 -8.3 3.2 7 288 A L - 0 0 105 -2,-1.2 2,-0.5 22,-0.1 -2,-0.1 -0.845 35.3-117.5-113.1 149.4 62.4 -10.6 0.9 8 289 A I - 0 0 56 -2,-0.3 24,-0.1 6,-0.1 6,-0.0 -0.721 34.0-119.9 -87.3 124.8 65.0 -9.6 -1.7 9 290 A N > - 0 0 52 -2,-0.5 3,-0.7 1,-0.1 5,-0.1 -0.297 9.4-135.4 -62.1 144.5 64.1 -10.6 -5.2 10 291 A E T 3 S+ 0 0 202 1,-0.2 -1,-0.1 3,-0.1 -2,-0.0 0.204 102.1 51.1 -86.0 18.8 66.4 -13.0 -7.0 11 292 A A T 3 S+ 0 0 93 1,-0.2 -1,-0.2 2,-0.0 -2,-0.1 0.369 105.3 52.1-133.4 0.6 66.3 -10.8 -10.2 12 293 A E S < S- 0 0 124 -3,-0.7 2,-0.4 2,-0.0 -1,-0.2 -0.993 82.8-106.6-141.8 149.8 67.1 -7.3 -8.9 13 294 A P + 0 0 109 0, 0.0 20,-0.4 0, 0.0 2,-0.3 -0.577 50.2 161.3 -74.5 123.4 69.8 -5.6 -6.8 14 295 A T - 0 0 18 -2,-0.4 2,-0.3 18,-0.1 18,-0.2 -0.931 38.6-105.3-140.2 164.4 68.4 -4.8 -3.3 15 296 A T E -A 31 0A 2 16,-1.0 16,-3.4 -2,-0.3 2,-0.4 -0.714 28.0-167.2 -93.9 142.5 69.9 -3.9 0.1 16 297 A N E -Ab 30 83A 41 66,-4.3 68,-1.2 -2,-0.3 2,-0.5 -0.970 1.1-165.0-131.0 121.3 69.8 -6.5 3.0 17 298 A I E -Ab 29 84A 0 12,-3.4 12,-2.6 -2,-0.4 2,-0.3 -0.880 6.5-156.3-107.6 133.4 70.5 -5.5 6.6 18 299 A Q E -Ab 28 85A 76 66,-1.8 68,-2.3 -2,-0.5 2,-0.4 -0.799 2.6-158.7-106.8 148.9 71.2 -8.2 9.3 19 300 A I E -Ab 27 86A 8 8,-3.4 8,-3.3 -2,-0.3 2,-0.4 -0.982 5.7-168.8-129.3 128.5 70.7 -7.8 13.0 20 301 A R E -Ab 26 87A 170 66,-1.7 68,-1.4 -2,-0.4 2,-0.4 -0.885 16.5-132.5-116.2 147.3 72.4 -9.9 15.8 21 302 A L E >> -Ab 25 88A 48 4,-4.8 3,-1.7 -2,-0.4 4,-0.9 -0.775 11.9-135.9 -99.0 141.2 71.6 -10.0 19.5 22 303 A A T 34 S+ 0 0 87 66,-1.9 -1,-0.1 -2,-0.4 67,-0.1 0.618 106.6 61.2 -68.5 -7.3 74.3 -9.8 22.2 23 304 A D T 34 S- 0 0 149 65,-0.2 -1,-0.3 2,-0.0 66,-0.1 0.201 135.9 -80.6-103.3 17.0 72.5 -12.6 23.9 24 305 A G T <4 S+ 0 0 79 -3,-1.7 2,-0.3 1,-0.3 -2,-0.2 0.833 88.8 136.7 90.4 35.7 73.0 -15.1 21.0 25 306 A G E < -A 21 0A 20 -4,-0.9 -4,-4.8 63,-0.1 2,-0.3 -0.842 29.0-174.6-114.6 153.1 70.1 -13.8 18.8 26 307 A R E +A 20 0A 177 -2,-0.3 2,-0.3 -6,-0.3 -6,-0.3 -0.997 6.0 175.7-147.9 142.3 70.2 -13.2 15.0 27 308 A L E -A 19 0A 58 -8,-3.3 -8,-3.4 -2,-0.3 2,-0.5 -1.000 19.0-141.5-145.8 145.9 67.7 -11.8 12.5 28 309 A V E -A 18 0A 72 -2,-0.3 2,-0.5 -10,-0.2 -10,-0.2 -0.913 13.7-171.1-112.3 132.5 67.9 -11.0 8.8 29 310 A Q E -A 17 0A 0 -12,-2.6 -12,-3.4 -2,-0.5 2,-0.5 -0.944 2.2-167.7-124.9 116.3 66.3 -7.9 7.2 30 311 A K E +A 16 0A 59 -24,-0.8 2,-0.3 -2,-0.5 -14,-0.3 -0.871 12.5 179.4-103.5 125.4 66.0 -7.5 3.4 31 312 A F E -A 15 0A 0 -16,-3.4 -16,-1.0 -2,-0.5 2,-0.3 -0.853 23.4-124.1-122.5 160.2 65.1 -4.0 2.1 32 313 A N > - 0 0 44 -2,-0.3 3,-2.2 -18,-0.2 42,-0.3 -0.793 18.5-127.1-103.6 145.6 64.6 -2.6 -1.4 33 314 A H T 3 S+ 0 0 32 -20,-0.4 42,-3.4 -2,-0.3 41,-2.1 0.781 113.3 51.9 -60.0 -23.6 66.5 0.5 -2.7 34 315 A S T 3 S+ 0 0 87 39,-0.3 -1,-0.3 40,-0.2 2,-0.2 0.338 99.1 82.5 -95.9 9.5 63.1 2.0 -3.6 35 316 A H S < S- 0 0 23 -3,-2.2 2,-0.4 38,-0.1 36,-0.1 -0.596 79.8-114.6-106.3 171.8 61.5 1.4 -0.2 36 317 A R > - 0 0 113 -2,-0.2 3,-3.5 35,-0.2 4,-0.4 -0.892 16.6-127.9-109.9 135.0 61.8 3.5 3.0 37 318 A I T >> S+ 0 0 18 -2,-0.4 3,-2.8 1,-0.3 4,-0.6 0.801 104.1 82.5 -48.4 -23.3 63.6 2.3 6.2 38 319 A S H >> S+ 0 0 47 1,-0.3 3,-1.4 2,-0.2 4,-0.8 0.861 76.4 70.1 -52.1 -29.9 60.3 3.3 7.8 39 320 A D H <> S+ 0 0 40 -3,-3.5 4,-2.1 1,-0.3 -1,-0.3 0.847 84.7 68.9 -57.3 -29.9 59.1 -0.1 6.6 40 321 A I H <> S+ 0 0 22 -3,-2.8 4,-3.8 -4,-0.4 5,-0.4 0.888 87.9 65.9 -57.8 -36.1 61.4 -1.5 9.3 41 322 A R H < S+ 0 0 91 -4,-2.8 3,-1.1 -5,-0.4 -1,-0.2 0.898 105.7 54.4 -53.4 -37.4 56.8 -4.5 15.4 46 327 A D H 3< S+ 0 0 95 -4,-2.4 2,-0.3 1,-0.3 -1,-0.2 0.973 122.9 26.6 -61.8 -50.2 55.9 -7.9 13.9 47 328 A A T 3< S+ 0 0 43 -4,-2.1 -1,-0.3 -5,-0.2 4,-0.3 -0.382 90.8 113.5-107.4 54.7 59.0 -9.6 15.5 48 329 A R < + 0 0 90 -3,-1.1 4,-0.4 -2,-0.3 -1,-0.1 -0.160 31.2 117.1-116.6 40.1 59.3 -7.2 18.5 49 330 A P S S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.923 91.2 21.3 -73.6 -44.8 58.4 -9.7 21.3 50 331 A A S > S+ 0 0 74 -3,-0.2 3,-0.9 1,-0.1 -2,-0.1 0.850 117.2 62.8 -91.8 -39.1 61.8 -9.5 23.0 51 332 A M G > + 0 0 25 -4,-0.3 3,-2.3 1,-0.3 -1,-0.1 0.690 68.6 119.2 -59.3 -14.3 63.0 -6.1 21.6 52 333 A A G 3 S+ 0 0 66 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.741 96.6 3.4 -20.0 -49.3 59.9 -4.7 23.5 53 334 A A G < S+ 0 0 100 -3,-0.9 2,-0.5 2,-0.0 -1,-0.3 -0.349 97.0 130.1-142.2 59.6 62.4 -2.6 25.5 54 335 A T < - 0 0 49 -3,-2.3 2,-0.8 2,-0.0 -3,-0.0 -0.948 55.7-127.1-118.3 130.5 65.9 -3.1 24.2 55 336 A S + 0 0 100 -2,-0.5 34,-1.2 33,-0.1 2,-0.3 -0.593 46.2 161.7 -74.7 110.9 68.3 -0.3 23.3 56 337 A F E -C 88 0A 79 -2,-0.8 2,-0.3 32,-0.2 32,-0.2 -0.834 21.7-166.3-128.7 167.9 69.5 -1.0 19.7 57 338 A V E -C 87 0A 75 30,-1.8 30,-2.4 -2,-0.3 2,-0.4 -0.996 11.7-142.5-150.6 154.2 71.1 0.8 16.8 58 339 A L E +C 86 0A 20 -2,-0.3 9,-1.4 28,-0.2 2,-0.3 -0.970 28.4 157.2-123.7 130.6 71.7 0.2 13.1 59 340 A M E -CD 85 66A 74 26,-2.4 26,-1.6 -2,-0.4 2,-0.3 -0.989 34.5-121.3-147.8 157.8 74.8 1.3 11.2 60 341 A T - 0 0 8 5,-2.1 5,-0.4 -2,-0.3 24,-0.1 -0.690 11.3-156.4 -99.4 153.3 76.8 0.4 8.1 61 342 A T S S+ 0 0 73 22,-0.4 -1,-0.1 -2,-0.3 23,-0.1 0.880 81.5 62.4 -96.2 -48.7 80.4 -0.8 8.1 62 343 A F S S+ 0 0 178 21,-0.3 22,-0.1 1,-0.3 -1,-0.0 0.930 124.1 19.8 -42.1 -69.9 81.8 0.0 4.6 63 344 A P S S- 0 0 61 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.645 101.9-135.2 -76.8 -13.9 81.3 3.8 4.9 64 345 A N + 0 0 124 1,-0.2 2,-0.3 -5,-0.0 -3,-0.2 0.973 54.6 141.8 60.0 51.8 81.2 3.5 8.7 65 346 A K - 0 0 99 -5,-0.4 -5,-2.1 14,-0.1 2,-0.4 -0.917 57.7-105.8-126.0 153.2 78.2 5.9 9.0 66 347 A E B -D 59 0A 142 -2,-0.3 -7,-0.2 -7,-0.2 -9,-0.0 -0.600 52.3 -93.2 -78.0 130.0 75.1 5.9 11.2 67 348 A L - 0 0 57 -9,-1.4 2,-0.2 -2,-0.4 -1,-0.1 0.154 46.7-177.6 -34.5 157.6 71.9 4.8 9.2 68 349 A A + 0 0 48 -3,-0.1 11,-0.2 11,-0.0 2,-0.1 -0.665 10.2 156.3-167.4 105.0 69.9 7.7 7.7 69 350 A D - 0 0 45 -2,-0.2 5,-0.1 1,-0.1 -33,-0.1 -0.185 20.3-165.6-113.0-152.0 66.6 7.4 5.8 70 351 A E - 0 0 135 2,-0.2 -1,-0.1 3,-0.1 -34,-0.1 0.102 51.5 -80.9-161.9 -70.3 63.7 9.7 5.1 71 352 A N S S+ 0 0 95 2,-0.4 -35,-0.2 -36,-0.1 3,-0.1 0.198 99.2 69.0 173.7 -27.5 60.4 8.2 3.8 72 353 A Q S S- 0 0 132 1,-0.2 -2,-0.2 -37,-0.1 -34,-0.2 0.222 102.0 -18.8 -88.3-144.5 60.7 7.7 -0.0 73 354 A T - 0 0 39 1,-0.1 -2,-0.4 -37,-0.1 -39,-0.3 0.024 62.5-123.9 -51.7 170.0 63.0 5.1 -1.7 74 355 A L S > S+ 0 0 12 -41,-2.1 3,-1.2 -42,-0.3 5,-0.4 0.834 108.3 55.9 -89.7 -34.6 65.9 3.7 0.3 75 356 A K G > S+ 0 0 120 -42,-3.4 3,-3.4 1,-0.3 5,-0.4 0.817 88.5 78.9 -67.1 -26.6 68.7 4.6 -2.1 76 357 A E G 3 S+ 0 0 95 -43,-0.5 -1,-0.3 1,-0.3 -2,-0.1 0.835 78.9 70.6 -51.7 -29.1 67.5 8.2 -1.9 77 358 A A G < S- 0 0 18 -3,-1.2 -1,-0.3 -4,-0.2 -2,-0.2 0.682 103.4-134.6 -63.7 -12.0 69.3 8.3 1.5 78 359 A N S < S+ 0 0 123 -3,-3.4 -1,-0.1 -4,-0.1 -2,-0.1 0.552 88.3 92.2 70.6 2.8 72.5 8.2 -0.7 79 360 A L + 0 0 29 -5,-0.4 2,-0.8 -11,-0.2 -4,-0.1 0.259 43.9 150.0-110.5 12.2 73.8 5.6 1.8 80 361 A L + 0 0 64 -5,-0.4 -5,-0.1 1,-0.2 3,-0.1 -0.188 9.0 162.6 -47.5 93.3 72.5 2.5 -0.1 81 362 A N - 0 0 34 -2,-0.8 2,-3.4 1,-0.1 -1,-0.2 0.473 37.3-143.2 -96.6 -1.8 75.3 0.2 1.0 82 363 A A S S+ 0 0 46 -3,-0.1 -66,-4.3 -69,-0.1 2,-0.6 -0.207 86.3 51.8 71.1 -56.6 73.3 -3.0 0.1 83 364 A V E S+b 16 0A 68 -2,-3.4 -22,-0.4 -68,-0.2 -21,-0.3 -0.922 71.8 172.3-115.9 114.5 74.7 -4.8 3.1 84 365 A I E -b 17 0A 19 -68,-1.2 -66,-1.8 -2,-0.6 2,-0.5 -0.824 25.2-131.2-118.0 158.7 74.3 -3.0 6.5 85 366 A V E -bC 18 59A 52 -26,-1.6 -26,-2.4 -2,-0.3 2,-0.4 -0.914 17.4-166.6-112.3 132.7 75.1 -4.2 10.1 86 367 A Q E -bC 19 58A 6 -68,-2.3 -66,-1.7 -2,-0.5 2,-0.4 -0.937 6.3-154.2-117.5 136.4 72.5 -3.9 12.9 87 368 A R E -bC 20 57A 183 -30,-2.4 -30,-1.8 -2,-0.4 2,-0.5 -0.874 2.3-160.0-112.1 143.1 73.4 -4.3 16.6 88 369 A L E bC 21 56A 4 -68,-1.4 -66,-1.9 -2,-0.4 -32,-0.2 -0.948 360.0 360.0-122.1 115.5 71.1 -5.4 19.4 89 370 A T 0 0 118 -34,-1.2 -34,-0.1 -2,-0.5 -2,-0.0 -0.932 360.0 360.0-140.5 360.0 72.1 -4.6 23.1