==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 21-JUN-07 2JR8 . COMPND 2 MOLECULE: ANTIMICROBIAL PEPTIDE MORICIN; . SOURCE 2 SYNTHETIC: YES . AUTHOR Y.GONG,H.DAI,S.RAYAPROLU,R.HUANG,O.PRAKASH,H.JIANG . 42 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5031.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 78.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 64.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -28.2 -28.0 12.5 0.2 2 2 A K - 0 0 190 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.864 360.0 -96.1 61.2 108.7 -27.3 9.9 -2.5 3 3 A I - 0 0 142 1,-0.1 2,-2.5 2,-0.0 3,-0.4 -0.360 31.7-144.7 -56.7 109.0 -26.7 6.4 -1.2 4 4 A P >> + 0 0 86 0, 0.0 4,-1.3 0, 0.0 3,-0.6 -0.311 43.8 149.9 -75.5 58.9 -22.8 6.2 -0.9 5 5 A V H 3> + 0 0 67 -2,-2.5 4,-2.6 1,-0.2 5,-0.2 0.853 68.0 60.3 -59.7 -35.7 -22.8 2.5 -1.9 6 6 A K H 3> S+ 0 0 143 -3,-0.4 4,-2.5 1,-0.2 -1,-0.2 0.854 99.3 57.8 -60.9 -35.2 -19.4 3.0 -3.5 7 7 A A H <> S+ 0 0 61 -3,-0.6 4,-1.5 2,-0.2 -1,-0.2 0.949 110.3 40.9 -60.3 -51.4 -18.1 4.0 -0.1 8 8 A I H X S+ 0 0 119 -4,-1.3 4,-1.2 1,-0.2 3,-0.2 0.920 117.5 48.0 -63.5 -45.2 -19.1 0.8 1.6 9 9 A K H X S+ 0 0 143 -4,-2.6 4,-1.0 1,-0.2 -1,-0.2 0.838 107.9 56.6 -64.8 -33.6 -18.0 -1.3 -1.4 10 10 A Q H X S+ 0 0 109 -4,-2.5 4,-1.6 -5,-0.2 -1,-0.2 0.845 101.4 56.9 -66.9 -34.2 -14.7 0.6 -1.5 11 11 A A H X S+ 0 0 56 -4,-1.5 4,-1.0 1,-0.2 -1,-0.2 0.857 103.2 54.0 -65.5 -35.8 -14.0 -0.4 2.1 12 12 A G H X S+ 0 0 43 -4,-1.2 4,-0.9 1,-0.2 -1,-0.2 0.804 105.5 53.8 -69.2 -28.9 -14.3 -4.1 1.2 13 13 A K H X S+ 0 0 122 -4,-1.0 4,-3.7 1,-0.2 3,-0.5 0.883 101.2 58.3 -72.2 -39.8 -11.7 -3.7 -1.6 14 14 A V H X S+ 0 0 95 -4,-1.6 4,-2.2 1,-0.2 5,-0.2 0.839 100.7 58.2 -58.7 -34.3 -9.1 -2.2 0.8 15 15 A I H X S+ 0 0 125 -4,-1.0 4,-0.9 2,-0.2 -1,-0.2 0.879 116.5 33.2 -64.1 -38.5 -9.4 -5.3 2.9 16 16 A G H X S+ 0 0 38 -4,-0.9 4,-2.3 -3,-0.5 5,-0.2 0.909 118.9 49.7 -83.8 -46.4 -8.4 -7.4 -0.1 17 17 A K H X S+ 0 0 141 -4,-3.7 4,-1.3 1,-0.2 -3,-0.2 0.861 112.8 50.1 -60.5 -35.9 -6.0 -5.0 -1.8 18 18 A G H X S+ 0 0 28 -4,-2.2 4,-2.1 -5,-0.3 -1,-0.2 0.862 108.8 51.2 -70.9 -35.8 -4.3 -4.5 1.5 19 19 A L H X S+ 0 0 118 -4,-0.9 4,-1.3 -5,-0.2 -2,-0.2 0.885 110.8 48.1 -68.0 -39.3 -3.9 -8.2 2.1 20 20 A R H X S+ 0 0 197 -4,-2.3 4,-1.2 1,-0.2 -1,-0.2 0.786 110.6 53.5 -71.0 -27.6 -2.4 -8.7 -1.4 21 21 A A H X S+ 0 0 38 -4,-1.3 4,-2.2 -5,-0.2 -2,-0.2 0.900 106.0 50.6 -73.4 -42.6 -0.0 -5.7 -0.7 22 22 A I H X S+ 0 0 125 -4,-2.1 4,-0.7 1,-0.2 -2,-0.2 0.825 107.1 56.2 -64.5 -31.7 1.3 -7.1 2.5 23 23 A N H < S+ 0 0 133 -4,-1.3 4,-0.4 1,-0.2 3,-0.3 0.872 114.3 37.8 -68.0 -37.8 2.0 -10.4 0.8 24 24 A I H >X S+ 0 0 99 -4,-1.2 4,-2.4 1,-0.2 3,-0.5 0.730 100.7 75.9 -84.5 -24.6 4.2 -8.7 -1.8 25 25 A A H 3X S+ 0 0 51 -4,-2.2 4,-1.6 1,-0.2 -1,-0.2 0.792 89.9 60.3 -56.9 -28.3 5.6 -6.3 0.7 26 26 A G H 3X S+ 0 0 51 -4,-0.7 4,-0.6 -3,-0.3 -1,-0.2 0.915 108.6 39.9 -67.2 -43.9 7.8 -9.2 1.9 27 27 A T H X> S+ 0 0 84 -3,-0.5 4,-2.0 -4,-0.4 3,-0.7 0.874 113.9 54.0 -72.7 -38.4 9.5 -9.7 -1.4 28 28 A T H 3X S+ 0 0 71 -4,-2.4 4,-1.9 1,-0.2 -1,-0.2 0.835 99.7 63.0 -64.4 -32.8 9.8 -6.0 -2.0 29 29 A H H 3< S+ 0 0 151 -4,-1.6 4,-0.4 -5,-0.2 -1,-0.2 0.819 107.1 44.2 -61.5 -31.2 11.5 -5.6 1.3 30 30 A D H XX S+ 0 0 124 -3,-0.7 3,-2.1 -4,-0.6 4,-0.9 0.936 106.2 57.6 -78.3 -50.8 14.3 -7.8 0.0 31 31 A V H >X S+ 0 0 89 -4,-2.0 3,-1.2 1,-0.3 4,-1.2 0.867 100.5 59.5 -46.9 -43.6 14.7 -6.2 -3.4 32 32 A V H 3X S+ 0 0 83 -4,-1.9 4,-2.8 1,-0.3 -1,-0.3 0.798 96.8 62.0 -57.8 -29.3 15.4 -2.9 -1.7 33 33 A S H <4 S+ 0 0 91 -3,-2.1 -1,-0.3 -4,-0.4 -2,-0.2 0.823 97.7 57.4 -66.8 -31.4 18.3 -4.5 -0.0 34 34 A F H << S+ 0 0 199 -3,-1.2 -1,-0.2 -4,-0.9 -2,-0.2 0.910 117.0 32.4 -65.7 -43.4 19.9 -5.1 -3.4 35 35 A F H < S- 0 0 192 -4,-1.2 -2,-0.2 2,-0.0 -3,-0.1 0.966 88.4-174.5 -77.7 -58.4 19.8 -1.4 -4.3 36 36 A R < - 0 0 185 -4,-2.8 2,-0.3 -5,-0.1 -3,-0.1 0.747 34.2 -96.4 63.1 121.7 20.4 0.1 -0.8 37 37 A P + 0 0 116 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.520 52.2 160.7 -72.0 128.3 20.1 3.9 -0.5 38 38 A K + 0 0 194 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.734 6.8 171.1-153.3 97.8 23.5 5.7 -0.6 39 39 A K - 0 0 190 -2,-0.2 0, 0.0 1,-0.1 0, 0.0 -0.792 40.1 -93.0-109.4 152.2 23.8 9.4 -1.5 40 40 A K - 0 0 187 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 -0.121 43.9-161.7 -57.1 156.8 26.8 11.6 -1.3 41 41 A K 0 0 175 1,-0.1 -1,-0.1 0, 0.0 0, 0.0 -0.859 360.0 360.0-137.2 171.6 27.4 13.6 1.9 42 42 A H 0 0 258 -2,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.529 360.0 360.0-135.4 360.0 29.4 16.6 3.2