==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 25-JUN-07 2JRD . COMPND 2 MOLECULE: HEMAGGLUTININ; . SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; . AUTHOR A.L.LAI,L.K.TAMM . 20 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2058.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 85.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 35.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G > 0 0 114 0, 0.0 4,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.6 -10.1 -6.7 2.7 2 2 A L H >> + 0 0 140 2,-0.2 4,-2.6 1,-0.2 3,-2.3 0.941 360.0 59.1 -74.6 -50.9 -7.0 -5.0 4.0 3 3 A F H 3> S+ 0 0 182 1,-0.3 4,-0.7 2,-0.2 -1,-0.2 0.742 104.5 55.2 -49.4 -24.7 -4.9 -5.7 0.9 4 4 A G H 34 S+ 0 0 58 2,-0.2 -1,-0.3 1,-0.2 4,-0.3 0.753 108.2 46.4 -80.3 -26.8 -7.5 -3.8 -0.9 5 5 A A H XX S+ 0 0 65 -3,-2.3 3,-2.6 -4,-0.5 4,-0.7 0.852 98.3 68.9 -81.6 -38.7 -7.1 -0.8 1.4 6 6 A I H >X S+ 0 0 83 -4,-2.6 4,-2.9 1,-0.3 3,-1.6 0.853 89.8 65.6 -46.7 -39.3 -3.3 -0.8 1.1 7 7 A A H 3X S+ 0 0 52 -4,-0.7 4,-1.1 1,-0.3 -1,-0.3 0.847 90.5 65.0 -52.2 -36.3 -3.8 0.2 -2.5 8 8 A G H <4 S+ 0 0 59 -3,-2.6 -1,-0.3 -4,-0.3 -2,-0.2 0.854 111.3 34.3 -55.0 -38.1 -5.2 3.4 -1.0 9 9 A A H XX S+ 0 0 66 -3,-1.6 3,-4.5 -4,-0.7 4,-2.2 0.825 101.1 76.0 -85.2 -36.5 -1.8 4.2 0.3 10 10 A I H 3X S+ 0 0 92 -4,-2.9 4,-1.7 1,-0.3 -2,-0.2 0.766 78.1 79.3 -44.9 -26.8 0.0 2.6 -2.6 11 11 A E H 3< S+ 0 0 140 -4,-1.1 -1,-0.3 1,-0.3 -2,-0.1 0.752 118.7 9.9 -54.2 -24.7 -1.0 5.8 -4.3 12 12 A N H X4 S+ 0 0 109 -3,-4.5 3,-0.7 2,-0.1 -2,-0.3 0.377 113.5 84.1-131.2 -8.9 1.9 7.3 -2.4 13 13 A G H >< S+ 0 0 47 -4,-2.2 3,-2.1 1,-0.3 4,-0.4 0.799 81.0 66.2 -66.6 -30.0 3.5 4.1 -1.2 14 14 A W T >X S+ 0 0 144 -4,-1.7 3,-2.2 1,-0.3 4,-1.1 0.831 81.5 78.4 -59.8 -32.2 5.3 3.7 -4.5 15 15 A E H <> S+ 0 0 119 -3,-0.7 4,-0.9 1,-0.3 -1,-0.3 0.738 87.2 60.8 -48.0 -23.9 7.2 6.8 -3.5 16 16 A G H <4 S+ 0 0 60 -3,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.844 103.9 45.6 -73.1 -35.8 9.1 4.4 -1.4 17 17 A M H <4 S+ 0 0 172 -3,-2.2 -2,-0.2 -4,-0.4 -1,-0.2 0.543 98.2 77.6 -83.1 -8.8 10.3 2.4 -4.5 18 18 A I H < S+ 0 0 92 -4,-1.1 -2,-0.2 -3,-0.0 -1,-0.2 0.981 78.5 73.5 -62.9 -59.7 11.1 5.7 -6.2 19 19 A D < 0 0 149 -4,-0.9 0, 0.0 -3,-0.1 0, 0.0 -0.379 360.0 360.0 -60.1 127.1 14.3 6.2 -4.3 20 20 A G 0 0 115 -2,-0.1 -3,-0.0 0, 0.0 -4,-0.0 -0.310 360.0 360.0 151.8 360.0 16.9 3.8 -5.6