==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-JUN-07 2JRO . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; . AUTHOR Y.TANG,D.WANG,C.NWOSU,K.CUNNINGHAM,R.XIAO,J.LIU,M.C.BARAN,G. . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6293.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 67.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 12.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 33.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 183 0, 0.0 2,-0.7 0, 0.0 23,-0.2 0.000 360.0 360.0 360.0 43.6 4.6 9.6 7.0 2 2 A R E -a 24 0A 121 21,-2.1 23,-2.0 17,-0.1 2,-0.2 -0.845 360.0-155.6-104.0 115.0 3.7 6.2 8.3 3 3 A V E -a 25 0A 86 -2,-0.7 23,-0.2 21,-0.3 3,-0.1 -0.559 1.5-156.1 -86.4 151.7 6.5 3.7 8.6 4 4 A F E -a 26 0A 30 21,-2.7 23,-2.8 -2,-0.2 24,-0.3 -0.898 12.9-175.8-132.2 103.4 5.9 -0.1 8.5 5 5 A P S S+ 0 0 102 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.615 79.7 48.7 -70.3 -12.6 8.5 -2.4 10.2 6 6 A V S S- 0 0 91 1,-0.2 21,-0.2 2,-0.1 22,-0.2 -0.871 75.5-140.9-125.2 157.9 6.6 -5.3 8.9 7 7 A Y + 0 0 66 -2,-0.3 -1,-0.2 19,-0.1 5,-0.2 0.928 34.5 154.2 -80.6 -85.2 5.2 -6.1 5.4 8 8 A A >> - 0 0 27 3,-0.1 4,-1.9 2,-0.1 3,-0.6 0.978 32.4-153.5 53.2 81.1 1.7 -7.7 5.8 9 9 A P H 3> S+ 0 0 54 0, 0.0 4,-2.0 0, 0.0 3,-0.2 0.895 90.3 45.9 -49.6 -54.7 0.1 -6.8 2.4 10 10 A K H 3> S+ 0 0 139 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.792 110.0 55.0 -65.4 -28.7 -3.5 -6.9 3.6 11 11 A L H <> S+ 0 0 101 -3,-0.6 4,-1.9 2,-0.2 -1,-0.2 0.874 107.1 50.9 -72.6 -36.9 -2.7 -4.9 6.8 12 12 A I H X S+ 0 0 2 -4,-1.9 4,-1.7 -3,-0.2 -2,-0.2 0.967 115.3 41.0 -60.9 -54.1 -1.2 -2.1 4.6 13 13 A V H X S+ 0 0 11 -4,-2.0 4,-0.8 1,-0.2 -2,-0.2 0.909 113.4 53.9 -62.2 -44.4 -4.3 -1.9 2.4 14 14 A K H < S+ 0 0 145 -4,-2.4 3,-0.4 1,-0.2 -1,-0.2 0.876 115.0 40.3 -59.0 -38.5 -6.7 -2.3 5.3 15 15 A H H >X S+ 0 0 77 -4,-1.9 3,-1.4 1,-0.2 4,-1.4 0.705 102.1 70.5 -85.7 -20.4 -5.1 0.6 7.1 16 16 A A H 3X S+ 0 0 7 -4,-1.7 4,-1.0 1,-0.3 -1,-0.2 0.682 80.7 78.0 -68.8 -17.3 -4.6 2.6 3.9 17 17 A R H 3< S+ 0 0 211 -4,-0.8 -1,-0.3 -3,-0.4 -2,-0.2 0.811 106.7 30.1 -58.7 -29.7 -8.4 3.1 4.0 18 18 A I H <4 S+ 0 0 128 -3,-1.4 3,-0.2 -4,-0.2 -2,-0.2 0.740 126.8 42.3-100.1 -30.4 -7.8 5.7 6.6 19 19 A F H < S+ 0 0 83 -4,-1.4 -2,-0.2 1,-0.2 -3,-0.2 0.227 73.7 141.5-100.3 10.5 -4.4 7.0 5.5 20 20 A L < + 0 0 62 -4,-1.0 17,-1.5 -5,-0.1 2,-0.6 0.593 63.3 53.4 -29.3 -36.5 -5.4 6.9 1.8 21 21 A T S S+ 0 0 85 14,-0.3 2,-0.3 -3,-0.2 14,-0.2 -0.922 97.7 40.7-112.5 112.8 -3.5 10.1 1.0 22 22 A G E S- B 0 34A 30 12,-2.9 12,-2.2 -2,-0.6 2,-0.3 -0.981 81.3 -67.2 160.6-142.2 0.1 10.2 2.0 23 23 A V E - B 0 33A 26 -2,-0.3 -21,-2.1 10,-0.2 2,-0.3 -0.992 29.3-158.5-153.8 139.6 3.2 8.1 2.1 24 24 A I E -aB 2 32A 4 8,-3.2 8,-3.5 -2,-0.3 2,-0.5 -0.883 11.4-148.5-120.2 152.6 4.4 4.9 3.9 25 25 A W E -aB 3 31A 121 -23,-2.0 -21,-2.7 -2,-0.3 6,-0.2 -0.746 21.8-175.5-120.5 79.5 7.9 3.5 4.6 26 26 A V E > -aB 4 30A 3 4,-1.7 4,-0.7 -2,-0.5 -19,-0.1 -0.554 26.5-136.6 -72.6 142.4 7.5 -0.2 4.6 27 27 A K T 4 S+ 0 0 162 -23,-2.8 -1,-0.1 -21,-0.2 -20,-0.1 0.596 102.0 49.1 -78.2 -11.6 10.7 -2.1 5.5 28 28 A D T 4 S+ 0 0 62 -24,-0.3 -1,-0.2 -22,-0.2 -21,-0.1 0.821 129.5 14.3 -94.5 -38.0 10.2 -4.6 2.8 29 29 A L T 4 S- 0 0 23 1,-0.2 2,-0.4 20,-0.1 -2,-0.1 0.857 95.3-140.2-103.8 -55.2 9.5 -2.3 -0.1 30 30 A G E < +B 26 0A 25 -4,-0.7 -4,-1.7 -26,-0.1 2,-0.7 -0.982 59.5 11.9 131.7-143.2 10.5 1.2 0.9 31 31 A R E -B 25 0A 154 -2,-0.4 2,-0.5 -6,-0.2 -6,-0.2 -0.649 66.2-178.3 -79.3 113.6 9.0 4.6 0.3 32 32 A L E -B 24 0A 2 -8,-3.5 -8,-3.2 -2,-0.7 2,-0.3 -0.953 9.9-161.7-120.6 116.7 5.5 4.1 -1.0 33 33 A E E +B 23 0A 95 -2,-0.5 7,-3.0 7,-0.4 2,-0.3 -0.759 12.4 175.5 -96.9 143.8 3.3 7.1 -2.0 34 34 A F E -BC 22 39A 4 -12,-2.2 -12,-2.9 -2,-0.3 2,-0.5 -0.991 15.7-156.1-149.3 136.6 -0.5 6.7 -2.3 35 35 A E E > S- C 0 38A 81 3,-2.3 3,-1.3 -2,-0.3 -14,-0.3 -0.948 75.0 -22.4-125.3 112.6 -3.2 9.2 -3.0 36 36 A K T 3 S- 0 0 142 -2,-0.5 -15,-0.2 1,-0.3 -1,-0.2 0.906 130.1 -42.8 55.2 48.2 -6.8 8.6 -2.0 37 37 A G T 3 S+ 0 0 21 -17,-1.5 2,-0.8 -21,-0.2 -1,-0.3 -0.100 113.2 112.0 99.4 -34.1 -6.4 4.8 -1.9 38 38 A R E < -C 35 0A 163 -3,-1.3 -3,-2.3 -18,-0.1 2,-0.3 -0.658 62.1-141.0 -86.5 108.6 -4.4 4.4 -5.1 39 39 A F E -C 34 0A 7 -2,-0.8 -5,-0.3 -5,-0.3 2,-0.2 -0.524 24.4-141.8 -61.7 123.5 -0.8 3.3 -4.4 40 40 A L - 0 0 67 -7,-3.0 -7,-0.4 -2,-0.3 3,-0.1 -0.585 8.6-120.2 -96.6 153.8 1.4 5.1 -6.9 41 41 A L - 0 0 77 -2,-0.2 3,-0.1 1,-0.2 -9,-0.1 -0.839 16.2-164.8 -93.1 110.4 4.4 3.9 -8.7 42 42 A P - 0 0 80 0, 0.0 2,-0.2 0, 0.0 -1,-0.2 0.910 68.7 -49.8 -57.4 -43.6 7.5 6.1 -7.8 43 43 A R S S- 0 0 195 -3,-0.1 0, 0.0 1,-0.1 0, 0.0 -0.864 75.3 -61.9-167.0-163.8 9.3 4.6 -10.8 44 44 A K S S+ 0 0 154 -2,-0.2 6,-0.2 -3,-0.1 -1,-0.1 0.968 75.0 157.6 -59.8 -55.3 10.1 1.3 -12.5 45 45 A S - 0 0 35 4,-0.1 -1,-0.1 -3,-0.1 -4,-0.0 -0.071 53.3 -28.5 61.2-164.2 12.1 0.2 -9.4 46 46 A L >> - 0 0 117 1,-0.1 4,-2.4 4,-0.0 3,-0.9 -0.642 58.9-120.1 -82.2 143.3 12.7 -3.5 -8.7 47 47 A P H 3> S+ 0 0 90 0, 0.0 4,-3.0 0, 0.0 5,-0.4 0.835 113.1 63.8 -49.2 -37.8 10.1 -6.0 -10.0 48 48 A K H 3> S+ 0 0 106 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.928 110.3 36.1 -50.5 -50.3 9.6 -7.1 -6.4 49 49 A V H <> S+ 0 0 20 -3,-0.9 4,-2.3 2,-0.2 5,-0.2 0.914 117.3 51.4 -74.2 -43.6 8.3 -3.6 -5.5 50 50 A K H X S+ 0 0 80 -4,-2.4 4,-1.6 -6,-0.2 -2,-0.2 0.933 114.0 42.6 -61.8 -48.1 6.4 -3.0 -8.8 51 51 A Q H X S+ 0 0 102 -4,-3.0 4,-2.6 1,-0.2 -1,-0.2 0.860 111.1 57.3 -68.3 -35.3 4.5 -6.3 -8.7 52 52 A A H X S+ 0 0 6 -4,-1.5 4,-2.1 -5,-0.4 -2,-0.2 0.931 106.3 48.4 -59.9 -47.1 3.8 -5.9 -5.0 53 53 A I H X S+ 0 0 1 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.868 110.8 52.6 -62.2 -36.5 2.1 -2.5 -5.5 54 54 A L H X S+ 0 0 75 -4,-1.6 4,-2.0 2,-0.2 -2,-0.2 0.932 110.4 46.0 -64.3 -45.8 0.1 -4.1 -8.3 55 55 A E H X S+ 0 0 145 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.803 109.8 55.9 -69.3 -28.1 -1.1 -6.9 -6.1 56 56 A L H X S+ 0 0 3 -4,-2.1 4,-2.3 2,-0.2 -1,-0.2 0.931 109.1 45.6 -65.8 -44.7 -1.8 -4.4 -3.4 57 57 A N H X S+ 0 0 50 -4,-2.3 4,-2.2 2,-0.2 -2,-0.2 0.830 111.1 54.6 -65.4 -32.9 -4.1 -2.5 -5.9 58 58 A E H X S+ 0 0 119 -4,-2.0 4,-1.1 2,-0.2 -2,-0.2 0.941 109.1 46.4 -61.3 -49.4 -5.5 -6.0 -6.8 59 59 A L H X S+ 0 0 50 -4,-2.6 4,-2.3 1,-0.2 5,-0.3 0.867 108.8 57.2 -60.9 -38.4 -6.3 -6.5 -3.1 60 60 A I H X S+ 0 0 36 -4,-2.3 4,-3.0 1,-0.2 5,-0.2 0.944 107.0 47.0 -56.7 -49.1 -7.8 -3.0 -3.0 61 61 A E H X S+ 0 0 120 -4,-2.2 4,-0.9 1,-0.2 -1,-0.2 0.699 110.1 55.7 -69.6 -18.2 -10.2 -3.9 -5.8 62 62 A A H < S+ 0 0 69 -4,-1.1 -1,-0.2 -3,-0.2 -2,-0.2 0.901 113.9 37.1 -78.4 -42.9 -11.0 -7.1 -3.9 63 63 A Q H < S+ 0 0 101 -4,-2.3 -2,-0.2 -5,-0.1 -3,-0.2 0.847 130.1 35.1 -75.5 -36.4 -12.0 -5.3 -0.7 64 64 A N H < S+ 0 0 65 -4,-3.0 2,-2.1 -5,-0.3 -3,-0.2 0.973 70.8 154.0 -76.1 -70.3 -13.6 -2.4 -2.7 65 65 A H < + 0 0 153 -4,-0.9 -1,-0.1 -5,-0.2 -4,-0.1 -0.076 62.6 70.5 69.8 -38.9 -15.0 -4.3 -5.7 66 66 A Q - 0 0 167 -2,-2.1 -1,-0.2 -3,-0.1 3,-0.1 0.996 67.0-174.3 -70.4 -65.0 -17.7 -1.7 -6.1 67 67 A T - 0 0 55 1,-0.1 2,-0.6 2,-0.0 5,-0.0 0.979 27.6-131.8 56.9 85.7 -15.7 1.3 -7.4 68 68 A K - 0 0 183 1,-0.1 2,-0.6 3,-0.0 3,-0.3 -0.564 16.4-128.4 -75.9 115.7 -18.5 3.9 -7.5 69 69 A T + 0 0 119 -2,-0.6 -1,-0.1 1,-0.2 -2,-0.0 -0.494 61.2 121.5 -72.3 112.0 -18.5 5.7 -10.8 70 70 A A S S- 0 0 79 -2,-0.6 -1,-0.2 3,-0.0 3,-0.1 0.535 91.0 -2.3-130.2 -51.3 -18.4 9.5 -10.4 71 71 A L S S+ 0 0 162 -3,-0.3 -2,-0.1 2,-0.1 -3,-0.0 -0.051 83.7 126.8-138.1 30.1 -15.3 10.9 -12.1 72 72 A E - 0 0 84 -4,-0.0 -1,-0.1 -5,-0.0 -3,-0.1 0.790 64.6-142.3 -63.8 -28.8 -13.7 7.8 -13.3 73 73 A H 0 0 172 1,-0.1 -2,-0.1 -3,-0.1 -1,-0.0 0.606 360.0 360.0 77.7 134.1 -13.7 9.5 -16.7 74 74 A H 0 0 220 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.479 360.0 360.0 -56.4 360.0 -14.2 8.0 -20.2