==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-JUN-07 2JRP . COMPND 2 MOLECULE: PUTATIVE CYTOPLASMIC PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM LT2; . AUTHOR K.DING,T.A.RAMELOT,J.R.CORT,H.WANG,C.NWOSU,K.CUNNINGHAM, . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6628.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 58.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 21.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 22 27.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 211 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -63.5 14.7 2.6 5.2 2 2 A E - 0 0 157 1,-0.1 2,-0.4 9,-0.0 9,-0.1 0.025 360.0 -82.9 60.2-173.8 12.5 5.7 5.1 3 3 A I + 0 0 60 9,-0.2 9,-2.7 7,-0.1 2,-0.3 -0.961 57.4 155.5-131.8 114.0 10.2 6.6 2.2 4 4 A T - 0 0 40 -2,-0.4 5,-0.2 7,-0.2 17,-0.1 -0.964 46.5 -95.1-138.2 154.6 11.6 8.3 -0.9 5 5 A C - 0 0 5 3,-0.9 5,-0.0 -2,-0.3 18,-0.0 -0.444 29.1-130.6 -65.8 137.1 10.8 8.7 -4.6 6 6 A P S S+ 0 0 118 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.516 109.7 36.7 -66.2 -3.8 12.7 6.2 -6.8 7 7 A V S S+ 0 0 125 1,-0.2 2,-0.8 0, 0.0 17,-0.1 0.757 124.7 31.7-110.1 -61.2 13.6 9.3 -8.9 8 8 A C S S- 0 0 17 15,-0.2 2,-1.8 3,-0.0 -3,-0.9 -0.827 71.3-156.4-107.0 95.2 14.2 12.1 -6.4 9 9 A H + 0 0 144 -2,-0.8 -5,-0.1 -5,-0.2 -1,-0.0 -0.542 57.1 107.9 -70.0 84.9 15.6 10.8 -3.1 10 10 A H S S- 0 0 121 -2,-1.8 2,-0.2 13,-0.1 -1,-0.2 0.470 83.3 -59.0-116.9 -83.8 14.5 13.6 -0.8 11 11 A A - 0 0 64 -3,-0.3 2,-0.5 -9,-0.1 11,-0.5 -0.798 37.2-149.7-172.1 124.7 11.6 12.7 1.5 12 12 A L - 0 0 17 -9,-2.7 2,-0.4 -2,-0.2 9,-0.2 -0.885 18.7-140.1-102.1 130.6 8.1 11.5 0.9 13 13 A E E -A 20 0A 163 7,-1.3 7,-2.7 -2,-0.5 2,-0.5 -0.745 9.8-143.2 -95.3 134.2 5.4 12.4 3.4 14 14 A R E +A 19 0A 86 -2,-0.4 5,-0.2 5,-0.2 3,-0.1 -0.822 24.3 171.4 -99.1 128.1 2.8 9.9 4.4 15 15 A N - 0 0 156 3,-2.2 4,-0.1 -2,-0.5 -1,-0.1 0.382 66.8 -82.0-108.1 -0.0 -0.8 11.1 5.1 16 16 A G S S+ 0 0 40 2,-0.6 2,-3.0 1,-0.0 -1,-0.2 0.130 110.9 18.7 98.6 135.2 -2.1 7.6 5.4 17 17 A D S S+ 0 0 69 -3,-0.1 13,-3.2 -2,-0.1 2,-0.3 -0.361 127.4 44.2 69.0 -60.1 -3.1 5.4 2.4 18 18 A T E - B 0 29A 24 -2,-3.0 -3,-2.2 11,-0.3 -2,-0.6 -0.850 67.9-150.6-120.7 145.1 -1.0 7.6 0.1 19 19 A A E -AB 14 28A 0 9,-3.1 9,-3.2 -2,-0.3 2,-0.4 -0.961 22.8-132.4-111.2 133.3 2.4 9.2 0.3 20 20 A H E -AB 13 27A 89 -7,-2.7 -7,-1.3 -2,-0.4 2,-0.6 -0.718 7.2-141.9 -93.5 130.9 3.0 12.4 -1.5 21 21 A C > - 0 0 0 5,-3.4 4,-0.5 -2,-0.4 5,-0.3 -0.821 10.7-153.6 -89.9 117.9 6.1 12.9 -3.7 22 22 A E T >4 S+ 0 0 60 -2,-0.6 3,-1.4 -11,-0.5 -1,-0.2 0.961 81.4 29.1 -51.3 -96.3 7.4 16.5 -3.3 23 23 A T T 34 S+ 0 0 71 1,-0.2 3,-0.2 2,-0.1 -15,-0.2 -0.557 121.0 42.8 -62.7 142.9 9.2 17.2 -6.6 24 24 A C T 34 S- 0 0 78 -2,-0.2 -1,-0.2 1,-0.2 -2,-0.1 -0.190 100.6-125.9 102.4 -30.6 7.5 15.1 -9.4 25 25 A A << + 0 0 78 -3,-1.4 2,-0.3 -4,-0.5 -1,-0.2 0.800 61.2 147.2 59.8 31.7 4.1 16.1 -8.0 26 26 A K - 0 0 78 -5,-0.3 -5,-3.4 -3,-0.2 2,-0.5 -0.740 41.6-147.9-101.5 143.1 3.3 12.4 -7.8 27 27 A D E -B 20 0A 78 -2,-0.3 2,-0.8 -7,-0.2 -7,-0.2 -0.959 7.9-155.3-111.1 125.0 1.1 10.6 -5.2 28 28 A F E -B 19 0A 23 -9,-3.2 -9,-3.1 -2,-0.5 2,-0.5 -0.869 6.1-158.2-102.3 105.9 2.0 7.1 -4.3 29 29 A S E -B 18 0A 47 -2,-0.8 42,-1.0 -11,-0.3 2,-0.4 -0.732 10.1-154.4 -83.5 125.6 -1.0 5.1 -2.9 30 30 A L E -C 70 0B 14 -13,-3.2 2,-0.4 -2,-0.5 40,-0.3 -0.844 2.1-152.1-104.3 137.5 0.1 2.2 -0.8 31 31 A Q E -C 69 0B 45 38,-3.0 38,-2.3 -2,-0.4 2,-0.8 -0.863 18.8-121.0-111.1 142.3 -2.0 -0.9 -0.4 32 32 A A E +C 68 0B 1 -2,-0.4 2,-0.3 36,-0.2 36,-0.2 -0.723 41.8 171.8 -85.9 107.9 -1.9 -3.2 2.6 33 33 A L E -C 67 0B 22 34,-2.9 34,-2.3 -2,-0.8 5,-0.2 -0.773 29.0-125.1-112.6 158.5 -1.0 -6.7 1.5 34 34 A C - 0 0 3 3,-1.3 32,-0.1 5,-0.3 7,-0.1 -0.754 16.6-131.1 -96.9 151.6 -0.2 -9.9 3.3 35 35 A P S S+ 0 0 96 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.690 109.9 33.3 -72.1 -19.0 3.1 -11.8 2.7 36 36 A D S S+ 0 0 115 1,-0.3 2,-0.7 0, 0.0 -3,-0.0 0.798 124.3 40.3-106.1 -43.3 1.1 -15.1 2.3 37 37 A C S S- 0 0 23 2,-0.1 2,-1.8 3,-0.0 -3,-1.3 -0.862 74.4-161.9-108.2 98.0 -2.2 -13.8 0.8 38 38 A R + 0 0 203 -2,-0.7 -5,-0.1 -3,-0.2 0, 0.0 -0.577 49.4 102.5 -83.8 82.5 -1.3 -11.2 -1.8 39 39 A Q S S- 0 0 118 -2,-1.8 -5,-0.3 -7,-0.1 3,-0.1 -0.875 93.5 -87.5-144.1 175.3 -4.6 -9.5 -2.2 40 40 A P - 0 0 66 0, 0.0 2,-1.6 0, 0.0 13,-0.2 0.364 60.6-150.2 -66.7 5.4 -6.3 -6.2 -1.1 41 41 A L - 0 0 24 11,-0.1 2,-0.3 -4,-0.1 -8,-0.1 -0.376 58.1 -24.6 63.7 -84.6 -7.2 -8.5 1.8 42 42 A Q - 0 0 89 -2,-1.6 11,-2.6 -3,-0.1 2,-1.0 -0.889 66.3-120.8-162.0 128.7 -10.5 -6.9 2.7 43 43 A V E -D 52 0C 66 -2,-0.3 2,-0.6 9,-0.2 9,-0.2 -0.613 27.8-173.6 -83.4 102.4 -11.7 -3.4 2.0 44 44 A L E -D 51 0C 49 7,-3.0 7,-2.5 -2,-1.0 2,-0.4 -0.859 8.8-174.3 -94.1 119.5 -12.5 -1.6 5.3 45 45 A K E +D 50 0C 135 -2,-0.6 2,-0.4 5,-0.2 5,-0.2 -0.949 12.9 175.3-120.9 137.4 -14.0 1.8 4.6 46 46 A A E > S-D 49 0C 66 3,-2.4 3,-1.5 -2,-0.4 -2,-0.0 -0.935 77.6 -20.0-142.3 114.5 -14.9 4.5 7.1 47 47 A C T 3 S- 0 0 148 -2,-0.4 3,-0.1 1,-0.3 -2,-0.0 0.772 129.3 -52.2 58.6 28.5 -16.2 7.9 6.1 48 48 A G T 3 S+ 0 0 51 1,-0.4 -1,-0.3 0, 0.0 0, 0.0 -0.167 113.1 121.4 101.6 -38.8 -14.6 7.2 2.7 49 49 A A E < -D 46 0C 69 -3,-1.5 -3,-2.4 -4,-0.1 -1,-0.4 -0.210 49.7-150.5 -59.7 148.7 -11.2 6.3 4.1 50 50 A V E +D 45 0C 38 -5,-0.2 2,-0.3 -3,-0.1 -5,-0.2 -0.962 20.2 177.2-131.7 139.6 -10.0 2.8 3.3 51 51 A D E -D 44 0C 47 -7,-2.5 -7,-3.0 -2,-0.4 2,-0.8 -0.995 26.6-133.1-136.9 140.2 -7.7 0.2 4.9 52 52 A Y E +D 43 0C 42 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.838 41.7 151.4 -99.6 109.3 -7.0 -3.2 3.6 53 53 A F - 0 0 35 -11,-2.6 2,-1.5 -2,-0.8 7,-0.1 -0.911 39.0-145.0-146.0 107.0 -7.3 -5.7 6.5 54 54 A C > + 0 0 2 -2,-0.4 5,-1.8 5,-0.3 4,-0.2 -0.586 31.4 167.3 -78.4 91.7 -8.3 -9.4 6.0 55 55 A Q T 5S- 0 0 112 -2,-1.5 3,-0.4 3,-0.2 5,-0.2 0.977 74.0 -9.2 -69.5 -84.7 -10.4 -9.9 9.2 56 56 A N T 5S+ 0 0 163 1,-0.2 -2,-0.1 3,-0.1 -1,-0.1 0.666 125.1 74.6 -92.9 -17.9 -12.3 -13.2 8.9 57 57 A G T 5S- 0 0 74 1,-0.0 -1,-0.2 2,-0.0 -2,-0.1 0.538 130.7 -25.3 -72.8 -5.0 -11.4 -13.8 5.3 58 58 A H T 5S- 0 0 88 -3,-0.4 2,-0.2 -4,-0.2 -3,-0.2 0.114 104.5 -68.0-165.8 -62.7 -7.9 -14.7 6.3 59 59 A G < - 0 0 24 -5,-1.8 -5,-0.3 2,-0.0 -3,-0.1 -0.546 46.1 -93.3 150.0 138.1 -6.6 -13.3 9.6 60 60 A L - 0 0 134 -5,-0.2 2,-0.3 -2,-0.2 -5,-0.1 -0.228 32.1-157.5 -73.9 156.8 -5.6 -10.0 11.0 61 61 A I - 0 0 36 -27,-0.0 2,-0.3 -2,-0.0 5,-0.1 -0.957 28.5-104.7-128.1 151.4 -2.1 -8.5 11.1 62 62 A S > - 0 0 80 -2,-0.3 3,-2.8 1,-0.1 4,-0.3 -0.632 33.0-129.0 -66.6 133.2 -0.4 -6.0 13.2 63 63 A K T 3 S+ 0 0 94 -2,-0.3 3,-0.2 1,-0.3 -1,-0.1 0.611 108.2 68.9 -66.4 -7.9 -0.2 -2.9 11.0 64 64 A K T 3 S+ 0 0 183 1,-0.2 -1,-0.3 3,-0.0 -2,-0.0 0.624 107.4 36.6 -78.6 -16.7 3.4 -2.8 12.0 65 65 A R S < S+ 0 0 179 -3,-2.8 2,-0.3 2,-0.1 -2,-0.2 0.233 89.1 115.8-121.6 10.3 3.9 -6.0 9.9 66 66 A V S S- 0 0 12 -4,-0.3 2,-1.2 -3,-0.2 -32,-0.2 -0.641 70.1-120.3 -84.4 139.8 1.5 -5.3 7.0 67 67 A N E -C 33 0B 86 -34,-2.3 -34,-2.9 -2,-0.3 2,-1.1 -0.673 27.0-168.8 -85.5 95.3 3.1 -5.0 3.6 68 68 A F E -C 32 0B 60 -2,-1.2 2,-0.4 -36,-0.2 -36,-0.2 -0.750 15.0-178.9 -84.9 100.1 2.2 -1.6 2.4 69 69 A V E -C 31 0B 54 -38,-2.3 -38,-3.0 -2,-1.1 2,-1.2 -0.802 32.8-119.9-105.2 142.4 3.3 -1.7 -1.3 70 70 A I E +C 30 0B 67 -2,-0.4 2,-0.6 -40,-0.3 -40,-0.2 -0.687 41.8 167.0 -80.3 97.1 3.0 1.2 -3.8 71 71 A S + 0 0 22 -2,-1.2 4,-0.1 -42,-1.0 -2,-0.0 -0.816 20.2 137.2-117.2 89.6 0.7 -0.3 -6.4 72 72 A D + 0 0 91 -2,-0.6 -1,-0.1 2,-0.1 2,-0.1 0.254 44.2 114.5-109.6 7.4 -0.5 2.5 -8.8 73 73 A Q S S- 0 0 95 -3,-0.1 2,-0.8 1,-0.1 3,-0.1 -0.339 82.4 -90.9 -78.9 158.9 -0.0 0.3 -11.8 74 74 A L + 0 0 108 1,-0.2 5,-0.3 -2,-0.1 -1,-0.1 -0.607 51.8 161.3 -74.1 107.0 -2.8 -1.0 -14.1 75 75 A E + 0 0 82 -2,-0.8 3,-0.3 3,-0.1 -1,-0.2 0.441 54.3 81.1-104.0 -3.9 -3.8 -4.4 -12.6 76 76 A H S S+ 0 0 148 1,-0.2 2,-0.8 2,-0.1 -2,-0.0 0.992 102.6 9.2 -69.6 -81.1 -7.2 -4.5 -14.3 77 77 A H S S+ 0 0 173 1,-0.1 -1,-0.2 3,-0.1 3,-0.1 -0.680 133.2 27.0-113.2 78.8 -6.8 -5.8 -17.9 78 78 A H S S+ 0 0 158 -2,-0.8 2,-1.9 -3,-0.3 -1,-0.1 -0.139 93.8 84.7 173.3 -45.3 -3.2 -7.0 -18.5 79 79 A H S S- 0 0 116 -5,-0.3 2,-0.2 2,-0.0 -1,-0.1 -0.588 72.7-178.1 -71.5 83.5 -1.9 -8.1 -15.2 80 80 A H 0 0 167 -2,-1.9 -3,-0.1 -3,-0.1 -4,-0.0 -0.618 360.0 360.0 -98.5 152.6 -3.5 -11.5 -15.6 81 81 A H 0 0 236 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.956 360.0 360.0-136.4 360.0 -3.5 -14.5 -13.3