==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-JUN-07 2JRR . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SILICIBACTER POMEROYI; . AUTHOR G.V.T.SWAPNA,R.TEJERO,M.JIANG,K.CUNNINGHAM,M.MAGLAQUI, . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5650.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 55.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 9.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 17.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 17.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 227 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -43.3 -0.2 26.2 4.7 2 2 A T - 0 0 116 1,-0.1 0, 0.0 3,-0.0 0, 0.0 0.467 360.0-138.6 -76.6 -3.1 0.9 23.8 1.8 3 3 A I - 0 0 153 2,-0.1 -1,-0.1 0, 0.0 0, 0.0 0.569 41.6-119.4 47.3 13.3 -2.3 21.8 2.2 4 4 A Q - 0 0 118 1,-0.1 43,-0.1 2,-0.0 42,-0.1 0.010 24.9 -91.4 54.6-165.1 0.1 18.9 1.7 5 5 A A - 0 0 51 2,-0.0 2,-1.7 0, 0.0 -1,-0.1 -0.643 21.3-156.1-150.6 88.4 -0.1 16.4 -1.2 6 6 A P - 0 0 99 0, 0.0 2,-1.1 0, 0.0 42,-0.2 -0.455 21.7-169.7 -63.1 85.8 -2.1 13.1 -0.8 7 7 A E E -a 48 0A 70 -2,-1.7 42,-1.8 40,-0.9 2,-0.4 -0.701 5.2-157.4 -87.6 96.1 -0.3 11.2 -3.6 8 8 A T E +a 49 0A 84 -2,-1.1 2,-0.4 40,-0.2 42,-0.2 -0.595 17.0 174.0 -75.5 127.5 -2.2 8.0 -4.3 9 9 A K E -a 50 0A 97 40,-2.4 42,-2.1 -2,-0.4 2,-0.6 -0.971 24.2-142.5-141.2 123.4 -0.1 5.2 -5.9 10 10 A I E -a 51 0A 88 -2,-0.4 2,-0.3 40,-0.2 42,-0.2 -0.733 22.1-164.6 -88.7 119.6 -1.1 1.6 -6.6 11 11 A V E -a 52 0A 38 40,-2.6 42,-2.5 -2,-0.6 5,-0.0 -0.736 23.3-140.7-106.0 154.7 1.7 -0.9 -6.0 12 12 A D S S+ 0 0 84 -2,-0.3 2,-0.2 40,-0.2 -1,-0.1 0.857 88.7 47.2 -80.9 -37.8 2.0 -4.6 -7.1 13 13 A K S S- 0 0 137 2,-0.1 40,-0.2 1,-0.1 -2,-0.1 -0.647 80.2-128.4-101.6 163.0 3.6 -5.8 -3.9 14 14 A S S S+ 0 0 32 -2,-0.2 20,-2.5 1,-0.1 2,-0.6 0.876 93.3 67.1 -80.0 -40.9 2.5 -5.1 -0.3 15 15 A R E S-C 33 0B 166 18,-0.2 2,-0.5 16,-0.1 18,-0.2 -0.749 74.5-163.3 -86.1 118.4 5.9 -4.0 1.1 16 16 A V E -C 32 0B 13 16,-2.9 16,-2.4 -2,-0.6 2,-1.7 -0.885 20.2-138.9-111.5 125.0 6.8 -0.7 -0.6 17 17 A A E +C 31 0B 48 -2,-0.5 14,-0.3 14,-0.2 2,-0.0 -0.578 40.3 172.6 -78.9 82.2 10.3 0.9 -0.7 18 18 A C E -C 30 0B 2 12,-2.2 12,-2.5 -2,-1.7 11,-0.2 -0.224 22.7-168.5 -84.5 178.7 9.3 4.5 -0.1 19 19 A D E - 0 0 70 1,-0.2 8,-2.1 10,-0.2 2,-0.3 0.567 33.0-109.0-133.0 -66.4 11.6 7.6 0.5 20 20 A G E -C 26 0B 6 6,-0.3 -1,-0.2 1,-0.2 6,-0.2 -0.971 39.4 -56.5 162.9-146.3 9.9 10.8 1.7 21 21 A G S S+ 0 0 11 4,-2.3 -1,-0.2 1,-0.4 25,-0.1 0.678 100.3 1.7 -96.6-105.4 9.0 14.3 0.6 22 22 A E S > S- 0 0 120 23,-0.1 3,-1.7 3,-0.1 -1,-0.4 -0.403 85.1 -97.5 -75.1 162.8 11.7 16.7 -0.7 23 23 A G T 3 S+ 0 0 62 1,-0.3 3,-0.4 2,-0.1 -1,-0.1 0.905 128.9 42.2 -45.0 -49.7 15.3 15.5 -1.0 24 24 A A T 3 S+ 0 0 103 1,-0.2 -1,-0.3 -4,-0.0 2,-0.1 0.494 106.3 68.6 -79.8 -3.0 16.2 17.1 2.4 25 25 A L S < S- 0 0 96 -3,-1.7 -4,-2.3 2,-0.0 2,-0.4 -0.367 121.0 -55.7-113.8 49.3 12.9 15.8 3.8 26 26 A G E +C 20 0B 32 -3,-0.4 -6,-0.3 -6,-0.2 -7,-0.0 -0.942 62.8 149.1 126.5-138.5 13.6 12.1 3.9 27 27 A H E + 0 0 83 -8,-2.1 -7,-0.2 -2,-0.4 -1,-0.1 0.906 32.1 132.8 67.9 47.3 14.7 9.6 1.2 28 28 A P E S- 0 0 93 0, 0.0 -9,-0.1 0, 0.0 -8,-0.1 0.348 81.3 -91.9-101.7 4.3 16.8 7.2 3.4 29 29 A R E - 0 0 173 -11,-0.2 2,-0.4 1,-0.1 -10,-0.2 0.814 55.7-177.8 77.1 99.1 15.2 4.1 1.9 30 30 A V E -C 18 0B 52 -12,-2.5 -12,-2.2 2,-0.0 2,-0.6 -0.997 17.1-149.1-131.2 131.9 12.2 3.0 4.0 31 31 A W E -C 17 0B 127 -2,-0.4 2,-0.4 -14,-0.3 -14,-0.2 -0.884 14.1-170.6-105.8 114.9 9.9 -0.1 3.5 32 32 A L E -C 16 0B 39 -16,-2.4 -16,-2.9 -2,-0.6 2,-0.6 -0.890 17.4-134.4-107.8 133.0 6.3 0.2 4.5 33 33 A Q E -C 15 0B 123 -2,-0.4 -18,-0.2 -18,-0.2 7,-0.1 -0.745 11.7-143.0 -90.0 119.9 3.9 -2.8 4.6 34 34 A I - 0 0 1 -20,-2.5 2,-0.5 -2,-0.6 7,-0.1 -0.714 17.3-139.4 -79.9 118.2 0.4 -2.4 3.0 35 35 A P >> - 0 0 48 0, 0.0 4,-3.2 0, 0.0 3,-2.3 -0.697 6.5-148.1 -83.1 121.6 -2.2 -4.3 5.1 36 36 A E T 34 S+ 0 0 151 -2,-0.5 20,-0.3 1,-0.3 21,-0.1 0.682 94.0 80.2 -56.5 -16.8 -4.9 -6.1 3.1 37 37 A D T 34 S- 0 0 158 1,-0.1 -1,-0.3 18,-0.1 -3,-0.0 0.772 120.9 -0.5 -61.7 -29.2 -7.1 -5.3 6.1 38 38 A T T <4 S- 0 0 61 -3,-2.3 -2,-0.2 2,-0.1 -1,-0.1 0.562 93.8-127.5-131.2 -38.8 -7.5 -1.8 4.7 39 39 A G S < S+ 0 0 0 -4,-3.2 13,-2.8 1,-0.3 2,-0.3 0.468 70.8 71.5 107.4 2.4 -5.5 -1.7 1.5 40 40 A W E -B 51 0A 87 -5,-0.4 2,-0.3 11,-0.2 -1,-0.3 -0.929 48.9-161.7-144.8 165.0 -3.2 1.4 1.9 41 41 A V E -B 50 0A 23 9,-1.3 9,-2.7 -2,-0.3 2,-0.4 -0.980 15.0-146.2-147.9 143.9 -0.2 2.9 3.7 42 42 A E E -B 49 0A 81 -2,-0.3 7,-0.2 7,-0.2 6,-0.1 -0.892 6.7-154.9-116.6 141.5 0.9 6.6 4.1 43 43 A C E >> -B 48 0A 4 5,-1.2 4,-1.5 -2,-0.4 5,-0.7 -0.930 17.0-146.8-110.7 109.3 4.3 8.3 4.3 44 44 A P T 45S+ 0 0 104 0, 0.0 -1,-0.1 0, 0.0 -23,-0.0 0.268 86.2 65.5 -69.1 15.6 3.9 11.6 6.2 45 45 A Y T 45S+ 0 0 136 -2,-0.5 -24,-0.1 3,-0.1 -23,-0.1 0.867 125.5 4.7 -96.1 -72.2 6.6 13.5 4.2 46 46 A C T 45S- 0 0 28 -3,-0.2 -39,-0.5 -25,-0.1 3,-0.2 0.346 101.0-123.0 -86.9 3.8 5.3 13.7 0.6 47 47 A D T <5 - 0 0 19 -4,-1.5 -40,-0.9 1,-0.2 2,-0.6 0.797 43.7-180.0 56.5 31.3 2.0 12.1 2.0 48 48 A C E < -aB 7 43A 5 -5,-0.7 -5,-1.2 -42,-0.2 2,-0.8 -0.503 13.5-158.4 -64.9 110.9 2.4 9.3 -0.6 49 49 A K E -aB 8 42A 65 -42,-1.8 -40,-2.4 -2,-0.6 2,-0.6 -0.826 5.8-156.9 -98.6 102.4 -0.6 7.0 -0.0 50 50 A Y E -aB 9 41A 23 -9,-2.7 -9,-1.3 -2,-0.8 2,-0.4 -0.700 5.6-162.0 -87.3 116.6 0.3 3.6 -1.5 51 51 A V E -aB 10 40A 10 -42,-2.1 -40,-2.6 -2,-0.6 2,-0.3 -0.787 22.4-115.6 -96.9 139.5 -2.7 1.4 -2.4 52 52 A L E > -a 11 0A 17 -13,-2.8 3,-2.5 -2,-0.4 2,-0.2 -0.580 38.3 -99.8 -77.4 131.8 -2.4 -2.4 -2.9 53 53 A K T 3 S- 0 0 132 -42,-2.5 -1,-0.1 -2,-0.3 -39,-0.0 -0.274 104.7 -3.7 -53.4 110.4 -3.1 -3.6 -6.4 54 54 A G T 3 S+ 0 0 61 -2,-0.2 -1,-0.3 1,-0.2 -42,-0.0 0.480 100.4 139.8 85.7 2.3 -6.7 -5.0 -6.5 55 55 A S S X S- 0 0 18 -3,-2.5 3,-1.1 -16,-0.2 -1,-0.2 -0.093 73.0 -97.6 -70.2 174.8 -7.2 -4.5 -2.7 56 56 A K G > S+ 0 0 179 -20,-0.3 3,-0.9 1,-0.3 -17,-0.1 0.759 128.7 57.8 -67.7 -23.9 -10.5 -3.2 -1.2 57 57 A A G 3 S+ 0 0 25 1,-0.2 -1,-0.3 -5,-0.1 3,-0.3 0.672 102.5 55.7 -74.2 -18.5 -8.9 0.3 -1.1 58 58 A D G < S+ 0 0 60 -3,-1.1 -1,-0.2 -6,-0.2 -2,-0.2 -0.047 75.3 106.6-101.1 29.7 -8.5 -0.2 -4.9 59 59 A A < + 0 0 46 -3,-0.9 -1,-0.2 2,-0.1 -2,-0.1 0.238 57.7 97.2 -93.2 13.1 -12.3 -0.8 -5.3 60 60 A L + 0 0 124 -3,-0.3 2,-2.4 1,-0.1 -2,-0.1 0.077 57.7 53.0 -83.2-160.7 -12.8 2.6 -6.9 61 61 A E S S- 0 0 181 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.445 122.9 -19.3 69.3 -75.6 -13.0 3.4 -10.7 62 62 A H - 0 0 147 -2,-2.4 -2,-0.0 0, 0.0 0, 0.0 -0.958 67.9-119.0-164.9 142.8 -15.8 0.8 -11.3 63 63 A H + 0 0 162 -2,-0.3 -3,-0.0 1,-0.1 -4,-0.0 -0.083 21.7 174.7 -79.2 178.6 -17.2 -2.3 -9.6 64 64 A H + 0 0 163 2,-0.0 -1,-0.1 3,-0.0 0, 0.0 0.359 3.2 178.3-151.2 -52.3 -17.4 -5.9 -10.8 65 65 A H - 0 0 142 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.449 41.0-125.7 61.2 2.8 -18.7 -8.1 -8.0 66 66 A H 0 0 151 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.024 360.0 360.0 44.6-164.2 -18.6 -11.3 -10.1 67 67 A H 0 0 225 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 -0.846 360.0 360.0 -89.7 360.0 -21.9 -13.2 -10.4