==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 29-JUN-07 2JRV . COMPND 2 MOLECULE: PEPTIDE PEP.1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.H.JUNG,H.J.YI,S.K.LEE,J.Y.LEE,H.J.JUNG,S.T.YANG,Y.-J.EU, . 15 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2012.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 153 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -31.2 -15.6 2.2 3.1 2 2 A M + 0 0 160 1,-0.5 2,-0.3 0, 0.0 0, 0.0 0.295 360.0 40.0-172.7 -12.9 -12.9 -0.3 3.9 3 3 A T S S- 0 0 97 0, 0.0 -1,-0.5 0, 0.0 0, 0.0 -0.969 71.6-120.7-145.4 161.2 -10.0 0.3 1.5 4 4 A L - 0 0 77 -2,-0.3 4,-0.1 -3,-0.1 2,-0.0 -0.718 33.0-103.4-104.5 157.3 -8.2 3.3 -0.0 5 5 A P - 0 0 92 0, 0.0 2,-5.1 0, 0.0 4,-0.4 -0.284 49.5 -83.2 -73.6 159.4 -7.8 4.1 -3.8 6 6 A E S S+ 0 0 133 1,-0.2 5,-0.1 2,-0.1 4,-0.0 -0.136 116.6 76.6 -60.1 59.9 -4.6 3.5 -5.7 7 7 A N S S+ 0 0 140 -2,-5.1 -1,-0.2 3,-0.1 3,-0.1 0.025 96.2 26.6-161.2 38.4 -3.3 6.8 -4.4 8 8 A Y S S+ 0 0 193 1,-0.4 3,-0.1 -3,-0.3 -2,-0.1 0.058 112.3 29.5-161.4 -75.5 -2.2 6.4 -0.8 9 9 A F S S- 0 0 62 -4,-0.4 2,-0.9 1,-0.2 -1,-0.4 0.249 118.6 -36.3 -79.4-149.2 -1.1 2.9 0.4 10 10 A S - 0 0 74 1,-0.1 2,-2.5 -3,-0.1 4,-0.3 -0.626 57.5-150.9 -77.5 107.2 0.5 0.3 -1.8 11 11 A E + 0 0 104 -2,-0.9 -1,-0.1 -3,-0.1 -5,-0.1 -0.419 59.9 100.5 -78.5 71.4 -1.2 0.8 -5.1 12 12 A R S S- 0 0 197 -2,-2.5 2,-2.6 2,-0.0 -2,-0.1 -0.979 88.8 -88.9-150.3 160.2 -0.8 -2.9 -6.2 13 13 A P + 0 0 133 0, 0.0 2,-0.6 0, 0.0 -2,-0.1 -0.360 55.6 170.0 -70.7 68.9 -2.9 -6.1 -6.3 14 14 A Y 0 0 161 -2,-2.6 -2,-0.0 -4,-0.3 -4,-0.0 -0.719 360.0 360.0 -86.1 121.1 -2.0 -7.3 -2.8 15 15 A H 0 0 236 -2,-0.6 -1,-0.1 0, 0.0 0, 0.0 -0.646 360.0 360.0 -83.2 360.0 -4.2 -10.3 -1.7