==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 10-JUL-07 2JSO . COMPND 2 MOLECULE: POLYMYXIN RESISTANCE PROTEIN PMRD; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR C.JIN,W.FU . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5534.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 36 40.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 128 0, 0.0 2,-0.3 0, 0.0 22,-0.0 0.000 360.0 360.0 360.0 125.7 3.2 -0.7 -2.1 2 2 A E - 0 0 97 45,-0.1 22,-0.7 22,-0.0 2,-0.3 -0.879 360.0-148.5-129.9 158.6 6.8 0.7 -2.3 3 3 A W E -AB 23 46A 43 43,-2.8 43,-2.4 -2,-0.3 2,-0.4 -0.807 6.8-133.4-134.0 163.7 8.5 2.6 -5.1 4 4 A L E -AB 22 45A 35 18,-2.4 18,-1.7 -2,-0.3 2,-1.0 -0.973 19.2-130.1-125.1 130.7 12.0 3.2 -6.6 5 5 A V E +A 21 0A 0 39,-2.7 38,-2.9 -2,-0.4 39,-0.3 -0.737 33.0 169.0 -78.7 101.6 13.5 6.6 -7.5 6 6 A K E S+ 0 0 91 14,-2.1 2,-0.3 -2,-1.0 -1,-0.2 0.745 70.8 13.4 -89.4 -23.8 14.7 5.9 -11.2 7 7 A K E -A 20 0A 89 13,-0.6 13,-2.2 -3,-0.1 2,-0.3 -0.967 69.5-174.5-143.5 155.1 15.4 9.7 -11.8 8 8 A S E -A 19 0A 29 -2,-0.3 2,-0.5 11,-0.3 11,-0.2 -0.985 16.5-146.6-153.1 149.0 15.8 12.6 -9.5 9 9 A C E -A 18 0A 28 9,-2.2 9,-0.8 -2,-0.3 32,-0.0 -0.919 20.4-142.7-129.6 96.3 16.3 16.4 -9.9 10 10 A C + 0 0 112 -2,-0.5 2,-0.3 7,-0.1 6,-0.1 -0.223 30.1 163.3 -54.7 146.7 18.4 18.1 -7.2 11 11 A N + 0 0 29 4,-0.1 74,-0.1 1,-0.1 6,-0.1 -0.986 36.6 176.0-154.2 164.1 17.4 21.6 -6.0 12 12 A K > + 0 0 194 -2,-0.3 3,-1.3 72,-0.2 -1,-0.1 0.430 69.8 88.3-119.6 -31.5 17.7 24.3 -3.3 13 13 A Q T 3 S- 0 0 99 1,-0.3 72,-0.1 71,-0.2 71,-0.0 0.570 114.4 -1.7 -69.2 -21.3 15.7 27.1 -4.9 14 14 A D T 3 S- 0 0 70 70,-0.4 2,-1.0 2,-0.1 -1,-0.3 0.062 94.1-116.9-142.2 19.5 12.1 26.3 -3.6 15 15 A N S < S+ 0 0 74 -3,-1.3 21,-0.5 1,-0.2 2,-0.5 0.042 77.0 128.7 56.5 -21.7 13.1 23.1 -1.7 16 16 A R - 0 0 71 -2,-1.0 19,-0.3 19,-0.2 2,-0.2 -0.440 39.4-170.7 -65.1 111.7 10.7 21.2 -4.1 17 17 A H E - C 0 34A 21 17,-1.7 17,-2.7 -2,-0.5 2,-0.3 -0.540 8.6-149.8 -85.1 166.0 12.5 18.2 -5.6 18 18 A V E +AC 9 33A 0 -9,-0.8 -9,-2.2 15,-0.2 2,-0.3 -0.989 20.0 170.5-135.9 140.3 11.1 16.1 -8.5 19 19 A L E -AC 8 32A 0 13,-2.3 13,-2.6 -2,-0.3 2,-0.9 -0.984 38.9-112.0-145.1 151.8 11.7 12.4 -9.0 20 20 A M E -A 7 0A 5 -13,-2.2 -14,-2.1 -2,-0.3 -13,-0.6 -0.826 32.4-155.2 -83.7 105.4 10.4 9.6 -11.2 21 21 A L E +A 5 0A 9 -2,-0.9 9,-2.6 -16,-0.2 2,-0.3 -0.742 24.6 171.8 -73.9 132.9 8.6 7.2 -8.8 22 22 A C E -AD 4 29A 0 -18,-1.7 -18,-2.4 -2,-0.4 7,-0.2 -0.879 39.5 -74.9-136.6 165.4 8.6 3.7 -10.3 23 23 A D E > -A 3 0A 47 5,-2.5 2,-2.6 -2,-0.3 3,-2.1 -0.261 61.1 -94.2 -48.9 147.7 7.7 0.1 -9.4 24 24 A A T 3 S+ 0 0 60 -22,-0.7 -1,-0.1 1,-0.3 -21,-0.1 -0.429 129.0 29.8 -68.1 67.5 10.2 -1.5 -7.1 25 25 A G T 3 S- 0 0 66 -2,-2.6 -1,-0.3 3,-0.1 -2,-0.1 0.103 119.8-101.4 155.3 -18.3 12.0 -3.0 -10.2 26 26 A G S < S+ 0 0 10 -3,-2.1 -2,-0.1 2,-0.2 -23,-0.0 0.448 81.2 129.6 93.7 4.4 11.2 -0.2 -12.8 27 27 A A S S+ 0 0 86 -5,-0.1 2,-0.3 1,-0.0 -3,-0.1 0.677 77.2 27.5 -68.1 -20.0 8.3 -2.1 -14.5 28 28 A I S S- 0 0 114 2,-0.0 -5,-2.5 -5,-0.0 2,-0.3 -0.970 77.8-156.6-139.8 144.6 5.9 0.9 -14.2 29 29 A K B +D 22 0A 89 -2,-0.3 43,-1.5 -7,-0.2 -7,-0.2 -0.973 17.4 160.6-136.7 145.1 6.9 4.6 -14.0 30 30 A M E - E 0 71A 46 -9,-2.6 2,-0.3 -2,-0.3 41,-0.2 -0.752 29.9-121.2-143.8-179.5 5.4 7.9 -12.7 31 31 A I E - E 0 70A 0 39,-2.7 39,-2.2 -11,-0.3 2,-0.3 -0.980 22.4-173.2-131.6 144.7 6.6 11.4 -11.6 32 32 A A E -CE 19 69A 0 -13,-2.6 -13,-2.3 -2,-0.3 2,-0.4 -0.996 18.5-146.6-137.2 142.8 6.2 13.1 -8.3 33 33 A E E +CE 18 68A 18 35,-2.5 34,-2.8 -2,-0.3 35,-1.6 -0.898 37.4 166.3 -97.9 131.8 6.9 16.6 -7.1 34 34 A V E -CE 17 66A 0 -17,-2.7 -17,-1.7 -2,-0.4 2,-0.3 -0.907 36.0-129.1-141.0 163.4 8.0 16.4 -3.4 35 35 A K E - E 0 65A 96 30,-2.5 30,-2.8 -2,-0.3 2,-0.3 -0.884 29.9-161.5-113.5 157.0 9.7 18.4 -0.6 36 36 A S E - E 0 64A 11 -21,-0.5 28,-0.2 -2,-0.3 4,-0.1 -0.993 31.0-166.4-145.1 140.1 12.6 16.9 1.3 37 37 A D S S+ 0 0 128 26,-1.5 2,-0.3 -2,-0.3 27,-0.1 0.343 88.7 32.9-103.7 1.5 14.4 17.4 4.6 38 38 A F S S- 0 0 78 25,-0.5 2,-0.1 24,-0.0 24,-0.0 -0.917 100.4 -80.9-145.8 162.9 17.3 15.1 3.4 39 39 A A - 0 0 89 -2,-0.3 2,-0.3 -3,-0.1 -2,-0.1 -0.387 41.7-171.3 -64.7 152.4 19.0 14.3 0.0 40 40 A V + 0 0 6 -2,-0.1 2,-0.3 -4,-0.1 16,-0.0 -0.980 12.0 163.4-145.9 137.9 17.2 11.8 -2.2 41 41 A K > - 0 0 109 -2,-0.3 3,-1.7 -33,-0.0 -36,-0.2 -0.907 43.3 -49.5-149.6 175.2 18.7 10.3 -5.5 42 42 A V T 3 S+ 0 0 78 -2,-0.3 -36,-0.2 1,-0.2 3,-0.1 -0.202 117.8 28.8 -51.9 135.2 18.5 7.5 -8.1 43 43 A G T 3 S+ 0 0 47 -38,-2.9 -1,-0.2 1,-0.3 2,-0.2 0.234 86.1 133.1 95.9 -9.5 18.3 4.0 -6.6 44 44 A D < - 0 0 4 -3,-1.7 -39,-2.7 -39,-0.3 -1,-0.3 -0.510 51.7-134.6 -69.6 137.4 16.5 5.0 -3.4 45 45 A L E -BF 4 57A 53 12,-1.6 12,-1.0 -41,-0.2 2,-0.4 -0.590 15.9-156.8 -72.8 155.1 13.5 3.1 -2.2 46 46 A L E +B 3 0A 2 -43,-2.4 -43,-2.8 -2,-0.2 10,-0.2 -0.994 12.6 179.3-129.9 138.8 10.5 5.1 -1.0 47 47 A S - 0 0 25 -2,-0.4 8,-2.7 8,-0.3 -45,-0.1 -0.988 32.3-103.8-139.0 138.7 7.9 3.6 1.3 48 48 A P B +G 54 0A 64 0, 0.0 6,-0.3 0, 0.0 3,-0.1 -0.292 32.6 171.7 -68.6 151.5 4.7 5.3 2.7 49 49 A L S S- 0 0 77 4,-2.7 2,-0.2 1,-0.7 5,-0.2 0.566 78.2 -23.0-122.9 -34.9 4.5 6.6 6.3 50 50 A Q S S- 0 0 127 3,-1.6 -1,-0.7 0, 0.0 0, 0.0 -0.825 96.0 -60.6-154.4-167.1 1.2 8.5 5.8 51 51 A N S S+ 0 0 158 -2,-0.2 15,-0.0 1,-0.2 3,-0.0 0.823 133.3 12.3 -52.3 -39.0 -0.7 9.9 2.8 52 52 A A S S+ 0 0 18 13,-0.1 14,-2.9 -4,-0.0 2,-0.3 0.697 109.4 84.0-114.9 -30.2 2.1 12.3 1.9 53 53 A L E + H 0 65A 55 12,-0.2 -4,-2.7 10,-0.1 -3,-1.6 -0.656 51.6 175.6 -83.3 138.8 5.2 11.4 3.9 54 54 A Y E -GH 48 64A 40 10,-2.3 10,-2.3 -2,-0.3 -3,-0.0 -0.972 29.6-113.3-135.6 147.2 7.5 8.6 2.6 55 55 A C E - H 0 63A 8 -8,-2.7 2,-0.3 -2,-0.3 -8,-0.3 -0.227 30.2-129.0 -60.7 167.2 10.8 7.2 3.8 56 56 A I E > S- H 0 59A 3 6,-1.4 2,-2.6 3,-1.2 3,-2.4 -0.946 73.0 -12.7-122.0 147.6 14.0 7.6 1.7 57 57 A N B 3 S-F 45 0A 42 -12,-1.0 -12,-1.6 -2,-0.3 -11,-0.1 -0.374 126.7 -52.0 68.7 -58.2 16.6 4.9 0.6 58 58 A R T 3 S+ 0 0 200 -2,-2.6 2,-0.4 1,-0.2 -1,-0.3 0.175 114.1 95.0 177.4 13.8 15.1 2.3 3.0 59 59 A E E X - H 0 56A 81 -3,-2.4 -3,-1.2 -14,-0.2 3,-0.8 -0.961 63.8-141.0-131.0 138.6 15.0 4.0 6.4 60 60 A K E 3 S+ 0 0 158 -2,-0.4 -1,-0.1 1,-0.2 -3,-0.1 0.649 93.7 71.7 -73.4 -19.2 12.2 5.9 8.2 61 61 A L E 3 S+ 0 0 134 -5,-0.1 2,-0.4 -6,-0.0 -1,-0.2 0.832 91.9 62.8 -66.5 -34.9 14.4 8.6 9.7 62 62 A H E < S+ 0 0 60 -3,-0.8 -6,-1.4 -6,-0.3 2,-0.3 -0.809 77.2 179.7 -96.9 133.3 15.0 10.2 6.2 63 63 A T E - H 0 55A 32 -2,-0.4 -26,-1.5 -8,-0.3 -25,-0.5 -0.963 27.8-165.5-141.6 150.0 11.8 11.6 4.6 64 64 A V E -EH 36 54A 2 -10,-2.3 -10,-2.3 -2,-0.3 2,-0.4 -0.864 19.7-140.5-118.9 163.8 10.1 13.3 1.6 65 65 A K E -EH 35 53A 111 -30,-2.8 -30,-2.5 -2,-0.3 -12,-0.2 -0.991 19.7-132.0-126.7 113.6 6.6 14.8 1.5 66 66 A V E +E 34 0A 32 -14,-2.9 -32,-0.3 -2,-0.4 3,-0.1 -0.405 28.1 172.5 -63.2 144.8 4.7 14.3 -1.8 67 67 A L E - 0 0 73 -34,-2.8 2,-0.3 1,-0.6 -33,-0.2 0.661 67.8 -9.2-122.1 -44.4 3.0 17.4 -3.2 68 68 A S E -E 33 0A 65 -35,-1.6 -35,-2.5 2,-0.0 -1,-0.6 -0.963 61.4-173.0-150.3 156.9 1.7 16.2 -6.6 69 69 A A E +E 32 0A 48 -2,-0.3 2,-0.3 -37,-0.3 -37,-0.2 -0.981 5.9 171.0-153.4 154.1 2.2 13.0 -8.8 70 70 A S E -E 31 0A 50 -39,-2.2 -39,-2.7 -2,-0.3 3,-0.1 -0.951 43.0 -80.7-151.5 161.2 1.2 11.8 -12.3 71 71 A S E -E 30 0A 95 -2,-0.3 -41,-0.3 -41,-0.2 2,-0.2 -0.359 66.1 -87.6 -60.1 148.9 1.8 9.0 -14.8 72 72 A Y + 0 0 84 -43,-1.5 -1,-0.1 -51,-0.1 -43,-0.1 -0.464 56.3 154.9 -69.0 134.2 5.1 9.4 -16.6 73 73 A S > - 0 0 62 -2,-0.2 4,-2.2 1,-0.1 5,-0.1 -0.930 44.0-127.2-146.7 144.9 5.3 11.4 -19.9 74 74 A P H > S+ 0 0 75 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.912 108.5 43.7 -66.1 -44.2 8.6 13.0 -21.0 75 75 A D H > S+ 0 0 104 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.893 115.0 50.4 -65.3 -38.7 7.3 16.6 -21.5 76 76 A E H > S+ 0 0 70 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.831 111.1 49.4 -70.5 -33.7 5.3 16.4 -18.2 77 77 A W H X S+ 0 0 45 -4,-2.2 4,-2.4 2,-0.2 3,-0.5 0.982 112.0 46.3 -65.2 -56.7 8.5 15.1 -16.4 78 78 A E H X S+ 0 0 118 -4,-2.5 4,-2.3 1,-0.3 -2,-0.2 0.856 108.2 58.3 -60.9 -35.7 10.7 17.9 -17.8 79 79 A R H X S+ 0 0 149 -4,-2.4 4,-2.0 2,-0.2 -1,-0.3 0.931 108.7 44.3 -53.0 -50.5 7.9 20.5 -16.9 80 80 A Q H X S+ 0 0 19 -4,-1.5 4,-2.1 -3,-0.5 -2,-0.2 0.927 109.6 56.0 -67.8 -38.9 8.1 19.5 -13.2 81 81 A C H < S+ 0 0 32 -4,-2.4 4,-0.4 1,-0.2 -1,-0.2 0.884 107.5 50.6 -56.1 -39.5 12.0 19.5 -13.4 82 82 A K H ><>S+ 0 0 94 -4,-2.3 5,-2.7 1,-0.2 3,-1.8 0.935 106.8 52.7 -63.7 -45.5 11.7 23.1 -14.6 83 83 A V H ><5S+ 0 0 51 -4,-2.0 3,-1.2 1,-0.3 -2,-0.2 0.865 100.7 62.7 -61.0 -33.1 9.3 24.0 -11.6 84 84 A A T 3<5S+ 0 0 4 -4,-2.1 -70,-0.4 1,-0.3 -1,-0.3 0.688 112.7 36.9 -59.5 -19.7 12.0 22.5 -9.2 85 85 A G T < 5S- 0 0 14 -3,-1.8 -1,-0.3 -4,-0.4 -2,-0.2 -0.235 125.2 -89.1-134.5 42.0 14.4 25.3 -10.5 86 86 A K T < 5S- 0 0 124 -3,-1.2 -3,-0.2 1,-0.2 -2,-0.1 0.710 81.2 -65.2 56.7 30.7 12.2 28.4 -11.0 87 87 A T < 0 0 98 -5,-2.7 -1,-0.2 1,-0.2 -4,-0.1 0.995 360.0 360.0 57.2 80.0 11.4 27.5 -14.6 88 88 A Q 0 0 172 -6,-0.3 -1,-0.2 0, 0.0 -3,-0.0 -0.949 360.0 360.0-124.3 360.0 14.7 27.7 -16.5