==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 10-JUL-07 2JSP . COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATORY PROTEIN ROS; . SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; . AUTHOR G.MALGIERI . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7620.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 50.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 10.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 12.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 159 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -84.7 14.1 15.2 5.4 2 2 A V + 0 0 77 6,-0.0 6,-0.1 1,-0.0 3,-0.0 -0.263 360.0 162.4-177.4 -90.9 15.4 15.0 1.7 3 3 A N + 0 0 118 1,-0.1 2,-0.4 4,-0.1 5,-0.1 0.827 36.8 128.0 44.0 43.0 13.0 14.4 -1.4 4 4 A V S S- 0 0 105 3,-0.1 -1,-0.1 1,-0.0 0, 0.0 -0.761 94.3 -52.9-123.0 78.5 15.7 15.6 -3.9 5 5 A E S S+ 0 0 188 -2,-0.4 -1,-0.0 1,-0.1 0, 0.0 0.940 134.2 61.1 43.5 80.5 15.8 12.8 -6.5 6 6 A K - 0 0 150 20,-0.1 -1,-0.1 2,-0.0 20,-0.1 -0.011 68.9-178.4 175.4 -53.7 16.4 9.8 -4.1 7 7 A Q - 0 0 69 1,-0.1 20,-0.2 2,-0.0 -3,-0.1 -0.342 53.2 -55.3 57.4-151.7 13.4 9.7 -1.7 8 8 A K B -A 26 0A 118 18,-1.5 2,-0.8 -6,-0.1 18,-0.6 -0.823 47.0-159.3-123.9 94.3 13.6 7.0 1.0 9 9 A P - 0 0 73 0, 0.0 2,-2.2 0, 0.0 16,-0.1 -0.641 9.2-153.0 -68.5 101.4 14.1 3.4 -0.4 10 10 A A - 0 0 10 -2,-0.8 13,-0.1 1,-0.2 15,-0.1 -0.516 53.1 -90.6 -76.8 65.0 12.9 1.2 2.6 11 11 A V - 0 0 105 -2,-2.2 -1,-0.2 5,-0.0 2,-0.2 0.014 66.0 -49.2 46.2-167.4 15.2 -1.5 1.3 12 12 A S - 0 0 93 1,-0.2 3,-0.3 -3,-0.1 43,-0.0 -0.473 68.7 -93.2 -76.4 168.3 14.1 -4.2 -1.2 13 13 A V S S+ 0 0 30 -2,-0.2 2,-2.5 1,-0.1 -1,-0.2 0.304 98.1 65.6 -61.3-161.0 10.9 -6.2 -0.7 14 14 A R S > S+ 0 0 235 1,-0.2 3,-0.5 42,-0.1 -1,-0.1 -0.424 109.8 47.0 72.8 -51.2 10.7 -9.6 1.1 15 15 A K T 3 S+ 0 0 168 -2,-2.5 -1,-0.2 -3,-0.3 -2,-0.1 0.181 76.1 105.3-104.0 18.9 11.7 -8.0 4.4 16 16 A S T 3 + 0 0 0 6,-0.1 7,-1.9 2,-0.0 2,-0.5 0.762 67.5 83.2 -61.1 -28.8 9.2 -5.1 4.1 17 17 A V B < +B 22 0B 61 -3,-0.5 2,-0.2 5,-0.2 5,-0.2 -0.735 63.5 165.9 -76.7 118.4 7.3 -7.1 6.8 18 18 A Q - 0 0 91 3,-2.0 2,-1.4 -2,-0.5 3,-0.4 -0.628 54.2 -44.7-121.0-170.2 8.7 -6.3 10.3 19 19 A D S S- 0 0 142 1,-0.3 3,-0.1 -2,-0.2 -2,-0.0 -0.348 117.2 -43.9 -65.9 84.3 7.5 -7.0 13.9 20 20 A D S S+ 0 0 118 -2,-1.4 2,-0.4 1,-0.1 -1,-0.3 0.614 125.8 99.1 53.8 28.5 3.9 -5.9 13.4 21 21 A H - 0 0 65 -3,-0.4 -3,-2.0 41,-0.1 2,-0.4 -0.994 61.1-150.9-142.9 132.8 5.1 -2.9 11.4 22 22 A I E -BC 17 31B 0 9,-3.4 9,-1.6 -2,-0.4 2,-0.3 -0.927 24.5-122.2-109.8 125.5 5.2 -2.5 7.6 23 23 A V E - C 0 30B 15 -7,-1.9 2,-0.8 -2,-0.4 7,-0.2 -0.569 19.7-121.5 -80.0 133.4 7.9 -0.2 6.2 24 24 A C >> - 0 0 0 5,-3.0 4,-3.0 -2,-0.3 3,-0.7 -0.634 23.8-145.1 -79.5 99.8 6.9 2.8 4.0 25 25 A L T 34 S+ 0 0 3 -2,-0.8 2,-0.1 1,-0.2 4,-0.1 -0.477 88.0 17.2 -58.8 141.9 8.6 2.4 0.6 26 26 A E B 34 S+A 8 0A 27 -18,-0.6 -18,-1.5 1,-0.2 -1,-0.2 0.020 132.9 50.6 76.2 -12.2 9.5 5.9 -0.8 27 27 A C T <4 S- 0 0 58 -3,-0.7 -2,-0.2 -20,-0.2 -1,-0.2 0.818 84.6-145.5-124.2 -53.9 9.1 7.3 2.8 28 28 A G < + 0 0 28 -4,-3.0 -4,-0.2 1,-0.4 -3,-0.1 -0.273 59.2 115.0 109.7 -45.9 11.1 5.2 5.3 29 29 A G - 0 0 47 -6,-0.1 -5,-3.0 1,-0.1 -1,-0.4 -0.009 57.3-132.9 -52.5 158.3 8.7 5.6 8.3 30 30 A S E +C 23 0B 58 -7,-0.2 2,-0.3 -3,-0.1 -7,-0.2 -0.912 31.3 148.1-127.3 152.2 6.9 2.5 9.7 31 31 A F E -C 22 0B 40 -9,-1.6 -9,-3.4 -2,-0.3 3,-0.2 -0.945 53.4-102.5-164.7 168.7 3.2 1.7 10.7 32 32 A K S S+ 0 0 152 -2,-0.3 31,-2.5 -11,-0.2 2,-0.3 0.779 108.7 34.3 -72.5 -35.3 0.5 -1.0 10.9 33 33 A S B > +D 62 0C 36 29,-0.2 4,-1.2 1,-0.1 3,-0.4 -0.769 47.0 169.6-134.6 99.4 -1.4 0.2 7.8 34 34 A L H > S+ 0 0 2 27,-2.1 4,-3.8 -2,-0.3 28,-0.2 0.881 74.7 81.6 -64.9 -30.8 0.3 1.7 4.7 35 35 A K H > S+ 0 0 95 26,-0.9 4,-1.6 2,-0.2 -1,-0.2 0.833 102.9 32.4 -41.7 -47.6 -3.1 1.5 2.9 36 36 A R H > S+ 0 0 166 -3,-0.4 4,-2.8 1,-0.2 5,-0.2 0.990 119.4 49.0 -74.1 -62.3 -4.2 4.7 4.6 37 37 A H H X>S+ 0 0 40 -4,-1.2 4,-3.2 2,-0.2 5,-0.5 0.802 112.5 53.7 -44.5 -46.4 -0.8 6.5 4.7 38 38 A L H ><>S+ 0 0 0 -4,-3.8 5,-3.2 2,-0.2 3,-0.6 0.963 112.9 38.2 -51.8 -72.8 -0.4 5.6 1.0 39 39 A T H 3<5S+ 0 0 76 -4,-1.6 5,-0.4 1,-0.3 -2,-0.2 0.648 120.3 51.7 -56.4 -28.5 -3.7 7.1 -0.2 40 40 A T H 3<5S+ 0 0 84 -4,-2.8 -1,-0.3 3,-0.2 -2,-0.2 0.946 130.2 6.3 -65.7 -63.2 -3.2 10.1 2.3 41 41 A H T <<5S+ 0 0 134 -4,-3.2 -3,-0.2 -3,-0.6 -2,-0.1 0.927 145.1 25.9 -92.2 -75.2 0.4 11.1 1.3 42 42 A H T - 0 0 48 -7,-0.1 4,-2.7 1,-0.1 5,-0.2 -0.642 45.2-117.6 -79.8 151.0 -4.5 2.8 -4.6 46 46 A P H > S+ 0 0 26 0, 0.0 4,-2.3 0, 0.0 5,-0.1 0.898 115.8 49.5 -55.6 -44.8 -2.2 0.1 -3.0 47 47 A E H > S+ 0 0 58 2,-0.2 4,-1.2 1,-0.2 11,-0.1 0.922 111.5 48.3 -61.0 -42.8 -2.2 -2.0 -6.2 48 48 A E H >> S+ 0 0 119 1,-0.2 4,-0.9 2,-0.2 3,-0.5 0.937 111.4 52.0 -62.7 -42.9 -1.3 1.0 -8.4 49 49 A Y H 3X S+ 0 0 3 -4,-2.7 4,-1.3 1,-0.2 3,-0.4 0.859 100.0 60.9 -61.0 -39.6 1.5 1.9 -5.9 50 50 A R H 3<>S+ 0 0 67 -4,-2.3 5,-2.0 1,-0.2 4,-0.4 0.873 97.4 61.7 -58.2 -33.2 3.0 -1.6 -6.1 51 51 A E H X<5S+ 0 0 111 -4,-1.2 3,-1.4 -3,-0.5 -1,-0.2 0.923 98.8 55.8 -56.3 -42.9 3.5 -0.9 -9.9 52 52 A K H 3<5S+ 0 0 112 -4,-0.9 -2,-0.2 -3,-0.4 -1,-0.2 0.925 116.7 33.6 -55.8 -55.7 5.8 2.0 -9.0 53 53 A W T 3<5S- 0 0 60 -4,-1.3 -1,-0.3 1,-0.1 -2,-0.2 0.357 107.2-125.4 -81.4 5.9 8.2 -0.2 -6.9 54 54 A D T < 5 - 0 0 139 -3,-1.4 -3,-0.2 -4,-0.4 -2,-0.1 0.634 41.4-168.1 50.6 31.0 7.5 -3.2 -9.2 55 55 A L > < - 0 0 6 -5,-2.0 3,-1.2 -6,-0.2 4,-0.4 -0.120 15.1-123.8 -65.2 106.5 6.5 -4.9 -5.9 56 56 A P G > S+ 0 0 74 0, 0.0 3,-1.9 0, 0.0 -42,-0.1 0.091 87.5 10.6 -57.7 151.2 6.2 -8.7 -6.5 57 57 A V G 3 S- 0 0 127 1,-0.3 -2,-0.1 2,-0.1 0, 0.0 0.610 122.1 -80.7 50.8 24.8 3.0 -10.6 -5.6 58 58 A D G < - 0 0 71 -3,-1.2 -1,-0.3 1,-0.1 3,-0.1 0.895 63.3-129.5 49.9 41.9 1.3 -7.2 -5.2 59 59 A Y < - 0 0 18 -3,-1.9 -1,-0.1 -4,-0.4 -2,-0.1 0.183 23.0-104.5 -19.2 118.9 2.9 -7.0 -1.7 60 60 A P - 0 0 41 0, 0.0 -1,-0.1 0, 0.0 -26,-0.1 -0.200 20.0-156.2 -60.6 138.4 0.2 -6.1 1.0 61 61 A M S S+ 0 0 7 -3,-0.1 -27,-2.1 2,-0.1 -26,-0.9 0.383 72.8 75.9 -94.3 6.1 0.3 -2.5 2.3 62 62 A V B S-D 33 0C 32 -29,-0.2 -29,-0.2 -28,-0.2 5,-0.1 -0.836 103.0 -56.3-120.1 145.9 -1.5 -3.6 5.6 63 63 A A > - 0 0 11 -31,-2.5 3,-2.7 -2,-0.3 4,-0.3 0.192 61.2-101.5 -12.7 135.6 -0.1 -5.4 8.7 64 64 A P T 3 S+ 0 0 36 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.637 119.0 17.4 -47.9 -35.1 1.6 -8.8 7.9 65 65 A A T > S+ 0 0 84 3,-0.1 3,-0.6 1,-0.1 -2,-0.1 0.188 84.1 130.1-124.1 29.6 -1.5 -10.8 9.1 66 66 A Y T < S- 0 0 167 -3,-2.7 2,-0.1 1,-0.3 -3,-0.1 0.764 94.5 -9.6 -50.3 -50.7 -4.2 -8.1 9.1 67 67 A A T > >S- 0 0 23 -4,-0.3 5,-2.0 -5,-0.1 3,-1.9 -0.653 125.1 -54.4-155.7 82.3 -6.7 -10.2 7.2 68 68 A E T < 5S- 0 0 167 -3,-0.6 -2,-0.1 1,-0.3 -3,-0.1 0.604 85.4 -90.6 54.0 27.1 -5.1 -13.4 5.8 69 69 A A T 3 5S+ 0 0 47 -6,-0.2 -1,-0.3 1,-0.1 -3,-0.1 0.564 120.0 84.2 40.1 29.0 -2.5 -11.1 4.2 70 70 A R T X 5S- 0 0 184 -3,-1.9 3,-2.9 -5,-0.1 4,-0.1 -0.384 117.3 -85.0-151.5 47.9 -4.8 -11.1 1.2 71 71 A S T 3 5S- 0 0 80 1,-0.3 -3,-0.1 2,-0.1 -5,-0.0 0.769 83.3 -68.2 43.0 40.4 -7.6 -8.4 1.7 72 72 A R T 3