==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 10-SEP-09 3JSS . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR RELB; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR D.VU,D.B.HUANG,G.GHOSH . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10178.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 34.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 17.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 278 A T 0 0 133 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 148.0 44.0 16.2 8.3 2 279 A S + 0 0 113 1,-0.1 0, 0.0 3,-0.1 0, 0.0 0.600 360.0 75.0 -95.9 -17.4 43.9 12.5 7.3 3 280 A E S S+ 0 0 153 1,-0.1 2,-0.6 24,-0.0 -1,-0.1 0.896 90.0 63.4 -60.6 -41.8 46.2 11.6 10.2 4 281 A L + 0 0 91 22,-0.1 2,-0.4 2,-0.0 -1,-0.1 -0.768 69.2 161.4 -88.5 119.1 43.2 12.1 12.6 5 282 A R - 0 0 143 -2,-0.6 22,-2.3 23,-0.2 2,-0.5 -0.979 29.1-151.4-144.0 129.6 40.4 9.6 11.9 6 283 A I E -A 26 0A 103 -2,-0.4 20,-0.3 20,-0.2 3,-0.1 -0.842 4.9-168.5 -96.2 130.9 37.5 8.5 14.1 7 284 A C E - 0 0 50 18,-3.0 2,-0.3 -2,-0.5 19,-0.2 0.858 62.9 -36.1 -86.6 -37.8 36.4 5.0 13.3 8 285 A R E -A 25 0A 157 17,-1.7 17,-2.4 3,-0.0 2,-0.5 -0.977 40.5-121.8-178.1 163.0 33.2 5.2 15.3 9 286 A I E -A 24 0A 90 -2,-0.3 15,-0.2 15,-0.2 -3,-0.0 -0.974 30.8-132.3-114.5 126.2 31.2 6.4 18.3 10 287 A N S S+ 0 0 58 13,-2.5 2,-0.3 -2,-0.5 -1,-0.1 0.859 93.8 29.4 -49.1 -40.0 29.7 3.5 20.3 11 288 A K - 0 0 101 12,-0.3 3,-0.1 1,-0.1 12,-0.0 -0.881 59.9-164.0-120.0 154.1 26.4 5.4 20.3 12 289 A E S S+ 0 0 191 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.287 75.2 47.2-118.4 10.3 24.9 7.7 17.7 13 290 A S + 0 0 95 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.987 57.7 151.0-148.2 150.7 22.1 9.2 19.9 14 291 A G - 0 0 46 -2,-0.3 2,-0.0 -3,-0.1 0, 0.0 -0.969 50.0 -67.5-170.7 164.8 21.9 10.7 23.3 15 292 A P > - 0 0 75 0, 0.0 3,-2.0 0, 0.0 5,-0.2 -0.347 37.2-127.3 -65.5 143.9 20.0 13.2 25.4 16 293 A C T 3 S+ 0 0 141 1,-0.3 0, 0.0 -2,-0.0 0, 0.0 0.622 104.9 79.1 -64.1 -10.3 20.5 16.9 24.5 17 294 A T T 3 S- 0 0 125 1,-0.2 -1,-0.3 2,-0.0 2,-0.0 0.767 86.6-159.4 -68.1 -27.7 21.3 17.2 28.2 18 295 A G < + 0 0 39 -3,-2.0 -1,-0.2 1,-0.1 3,-0.1 -0.294 56.9 111.3 75.2-166.0 24.7 15.8 27.7 19 296 A G + 0 0 92 1,-0.3 2,-0.5 -2,-0.0 -1,-0.1 0.364 49.3 138.8 79.4 -7.1 26.8 14.3 30.5 20 297 A E - 0 0 69 -5,-0.2 2,-0.3 1,-0.1 -1,-0.3 -0.599 51.8-133.4 -76.0 121.8 26.3 11.0 28.8 21 298 A E + 0 0 182 -2,-0.5 2,-0.2 -3,-0.1 -1,-0.1 -0.598 38.9 154.3 -77.8 130.9 29.5 8.9 28.9 22 299 A L - 0 0 61 -2,-0.3 2,-0.3 -12,-0.0 -13,-0.0 -0.794 30.3-134.7-140.9-177.9 30.5 7.3 25.5 23 300 A Y - 0 0 141 -2,-0.2 -13,-2.5 -12,-0.0 2,-0.4 -0.989 9.7-156.4-144.3 150.1 33.6 6.1 23.8 24 301 A L E -A 9 0A 53 -2,-0.3 2,-0.4 -15,-0.2 -15,-0.2 -0.987 10.2-141.0-130.4 141.4 35.0 6.6 20.3 25 302 A L E +A 8 0A 61 -17,-2.4 -18,-3.0 -2,-0.4 -17,-1.7 -0.799 34.9 150.4 -98.2 142.0 37.5 4.4 18.4 26 303 A C E -A 6 0A 51 -2,-0.4 -20,-0.2 -20,-0.3 3,-0.1 -0.932 41.9 -87.4-157.5 178.8 40.1 6.1 16.3 27 304 A D S S- 0 0 58 -22,-2.3 -20,-0.1 -2,-0.3 -1,-0.1 -0.122 76.2 -37.1 -83.2-173.4 43.5 5.9 14.8 28 305 A K + 0 0 154 -24,-0.1 2,-0.3 -2,-0.0 -1,-0.2 -0.140 67.9 158.9 -52.9 133.3 46.7 7.1 16.4 29 306 A V - 0 0 36 -3,-0.1 2,-0.7 -25,-0.1 5,-0.1 -0.952 43.2-110.8-148.2 162.1 46.5 10.3 18.4 30 307 A Q > - 0 0 87 3,-0.4 3,-2.5 -2,-0.3 -2,-0.0 -0.888 19.0-147.7-102.1 112.3 48.6 11.9 21.2 31 308 A K T 3 S+ 0 0 108 -2,-0.7 3,-0.4 1,-0.3 -1,-0.1 0.692 100.5 50.7 -50.8 -19.9 46.7 11.8 24.5 32 309 A E T 3 S+ 0 0 114 1,-0.2 -1,-0.3 19,-0.1 19,-0.0 0.627 116.3 39.2 -94.3 -13.8 48.4 15.1 25.4 33 310 A D S < S+ 0 0 133 -3,-2.5 -3,-0.4 2,-0.0 2,-0.3 -0.385 99.0 90.3-132.4 56.9 47.5 16.8 22.2 34 311 A I + 0 0 52 -3,-0.4 2,-0.3 -5,-0.1 -5,-0.0 -0.990 39.2 169.6-149.7 153.7 44.0 15.7 21.4 35 312 A S - 0 0 59 -2,-0.3 2,-0.4 13,-0.0 13,-0.1 -0.978 28.7-119.8-159.6 160.2 40.4 16.8 22.1 36 313 A V - 0 0 39 11,-0.4 11,-2.2 -2,-0.3 2,-0.5 -0.904 25.4-163.1-110.6 133.0 36.9 15.9 21.0 37 314 A R E -B 46 0B 137 -2,-0.4 2,-0.4 9,-0.2 9,-0.2 -0.950 10.0-167.3-128.5 121.1 34.6 18.5 19.4 38 315 A F E +B 45 0B 106 7,-3.2 7,-3.5 -2,-0.5 2,-0.3 -0.768 33.1 148.3 -92.0 140.5 30.9 18.5 19.0 39 316 A S E -B 44 0B 53 -2,-0.4 2,-0.3 5,-0.3 5,-0.2 -0.996 38.9-161.7-171.8 167.2 29.5 21.1 16.6 40 317 A T E > -B 43 0B 83 3,-2.4 3,-1.5 -2,-0.3 -2,-0.0 -0.782 60.9 -76.7-138.4 175.8 27.3 22.7 14.0 41 318 A A T 3 S+ 0 0 118 1,-0.3 3,-0.0 -2,-0.3 0, 0.0 0.845 131.2 20.9 -48.7 -40.4 27.9 25.7 11.7 42 319 A S T 3 S+ 0 0 118 -3,-0.0 2,-0.3 0, 0.0 -1,-0.3 -0.028 119.7 58.8-123.4 30.6 27.4 28.1 14.6 43 320 A W E < -B 40 0B 143 -3,-1.5 -3,-2.4 2,-0.0 2,-0.3 -0.988 51.7-173.1-156.3 149.9 27.9 26.1 17.8 44 321 A E E +B 39 0B 115 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.3 -0.995 3.2 179.4-149.3 138.2 30.7 24.1 19.3 45 322 A G E -B 38 0B 17 -7,-3.5 -7,-3.2 -2,-0.3 2,-0.4 -0.955 19.5-131.9-135.6 155.2 30.9 21.8 22.4 46 323 A R E -B 37 0B 196 -2,-0.3 -9,-0.2 -9,-0.2 2,-0.1 -0.892 15.6-121.2-117.3 141.9 33.7 19.8 23.8 47 324 A G - 0 0 24 -11,-2.2 2,-0.7 -2,-0.4 -11,-0.4 -0.494 29.6-127.7 -70.9 145.0 33.9 16.2 25.0 48 325 A D + 0 0 169 -2,-0.1 2,-0.3 -13,-0.1 -1,-0.1 -0.862 54.3 118.4-101.0 113.1 34.9 15.9 28.7 49 326 A F - 0 0 69 -2,-0.7 2,-0.2 -13,-0.0 -13,-0.1 -0.977 43.4-138.8-166.3 159.7 37.8 13.5 29.2 50 327 A S > - 0 0 62 -2,-0.3 3,-1.3 1,-0.0 4,-0.1 -0.510 42.1 -91.0-114.3-176.3 41.4 13.3 30.5 51 328 A Q G > S+ 0 0 100 1,-0.3 3,-1.8 2,-0.2 -20,-0.1 0.833 123.3 63.6 -65.5 -32.6 44.6 11.5 29.4 52 329 A A G 3 S+ 0 0 75 1,-0.3 -1,-0.3 3,-0.0 -21,-0.0 0.611 95.5 61.6 -68.0 -10.7 43.6 8.5 31.5 53 330 A D G < S+ 0 0 90 -3,-1.3 2,-0.7 -22,-0.1 -1,-0.3 0.370 83.3 87.2 -96.1 1.7 40.6 8.1 29.3 54 331 A V < - 0 0 49 -3,-1.8 2,-0.4 -4,-0.1 -23,-0.1 -0.911 63.8-176.6-104.5 109.1 42.6 7.5 26.2 55 332 A H - 0 0 129 -2,-0.7 2,-0.5 -24,-0.0 -2,-0.0 -0.875 29.0-129.7-113.2 142.1 43.4 3.8 26.0 56 333 A R + 0 0 246 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.762 45.4 172.3 -84.7 126.9 45.4 1.7 23.6 57 334 A Q - 0 0 156 -2,-0.5 2,-0.4 2,-0.0 0, 0.0 -0.908 34.7-131.5-137.7 165.4 43.2 -1.1 22.5 58 335 A I - 0 0 155 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.924 22.3-161.3-114.9 140.2 42.9 -4.0 20.1 59 336 A A - 0 0 76 -2,-0.4 2,-0.5 2,-0.0 -2,-0.0 -0.992 1.9-159.1-127.1 130.5 39.7 -4.4 18.2 60 337 A I - 0 0 109 -2,-0.4 2,-0.5 2,-0.0 -2,-0.0 -0.941 3.0-157.8-113.7 124.0 38.6 -7.6 16.5 61 338 A V + 0 0 138 -2,-0.5 2,-0.3 2,-0.0 -2,-0.0 -0.871 30.0 151.7 -98.2 127.9 36.1 -7.6 13.7 62 339 A F - 0 0 137 -2,-0.5 2,-0.4 0, 0.0 -2,-0.0 -0.991 44.9-115.5-154.2 158.8 34.3 -10.9 13.2 63 340 A K - 0 0 203 -2,-0.3 -2,-0.0 1,-0.0 0, 0.0 -0.821 41.0-114.5 -97.3 135.7 31.1 -12.5 12.0 64 341 A T - 0 0 81 -2,-0.4 -1,-0.0 1,-0.1 3,-0.0 -0.298 28.8-115.5 -66.1 152.9 29.1 -14.3 14.7 65 342 A P - 0 0 79 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.720 35.8-100.5 -90.2 140.8 28.7 -18.1 14.4 66 343 A P - 0 0 114 0, 0.0 2,-0.2 0, 0.0 4,-0.1 -0.294 43.2-110.0 -58.6 144.0 25.2 -19.5 13.8 67 344 A Y - 0 0 64 1,-0.1 3,-0.0 2,-0.1 -3,-0.0 -0.498 22.4-114.9 -77.2 148.2 23.7 -20.8 17.0 68 345 A E S S+ 0 0 178 1,-0.2 2,-0.7 -2,-0.2 -1,-0.1 0.854 105.8 45.6 -44.9 -48.6 23.2 -24.6 17.4 69 346 A D > + 0 0 74 1,-0.1 3,-0.6 2,-0.0 -1,-0.2 -0.890 58.9 178.5-108.8 109.8 19.4 -24.3 17.4 70 347 A L T 3 S+ 0 0 97 -2,-0.7 31,-0.3 1,-0.2 -1,-0.1 0.514 77.4 66.0 -84.4 -5.6 17.9 -22.0 14.8 71 348 A E T 3 + 0 0 144 29,-0.1 2,-0.3 30,-0.1 -1,-0.2 -0.039 66.6 144.5-106.3 30.4 14.4 -22.8 16.0 72 349 A I < - 0 0 27 -3,-0.6 29,-0.3 1,-0.1 4,-0.1 -0.540 35.0-163.8 -73.9 129.7 14.5 -21.1 19.4 73 350 A S S S+ 0 0 118 -2,-0.3 -1,-0.1 27,-0.1 26,-0.0 0.640 75.3 41.2 -85.8 -16.5 11.3 -19.5 20.5 74 351 A E S S- 0 0 138 25,-0.1 24,-0.1 1,-0.0 -1,-0.0 -0.939 98.1 -85.8-132.1 154.9 13.0 -17.5 23.2 75 352 A P - 0 0 79 0, 0.0 2,-0.5 0, 0.0 24,-0.2 -0.249 35.3-159.5 -57.5 140.7 16.3 -15.6 23.6 76 353 A V E -C 98 0C 40 22,-2.1 22,-2.7 -4,-0.1 2,-0.7 -0.958 2.6-156.9-126.0 110.2 19.4 -17.6 24.6 77 354 A T E +C 97 0C 91 -2,-0.5 20,-0.3 20,-0.3 2,-0.2 -0.790 20.3 179.9 -94.1 117.1 22.3 -15.7 26.1 78 355 A V E -C 96 0C 38 18,-2.8 18,-2.0 -2,-0.7 2,-0.2 -0.447 28.9 -88.7-105.9-179.9 25.6 -17.5 25.7 79 356 A N E -C 95 0C 107 16,-0.2 2,-0.4 -2,-0.2 -1,-0.1 -0.621 31.5-169.7 -92.6 148.8 29.2 -16.9 26.6 80 357 A V E +C 94 0C 65 14,-1.2 14,-2.1 -2,-0.2 2,-0.3 -0.982 19.7 147.5-139.6 125.4 31.7 -15.1 24.5 81 358 A Q - 0 0 84 -2,-0.4 2,-0.2 12,-0.2 11,-0.1 -0.990 45.8-100.0-155.2 161.9 35.4 -15.0 25.2 82 359 A L - 0 0 113 10,-0.3 9,-2.0 -2,-0.3 2,-0.3 -0.523 36.4-170.6 -79.2 152.4 38.9 -14.8 23.8 83 360 A Q B -D 90 0D 125 7,-0.2 7,-0.2 -2,-0.2 2,-0.2 -0.958 19.8-128.7-149.1 127.2 40.8 -18.1 23.6 84 361 A R > - 0 0 132 5,-1.7 4,-0.8 -2,-0.3 6,-0.0 -0.532 10.5-146.2 -76.4 139.3 44.5 -18.6 22.7 85 362 A L T 4 S+ 0 0 167 -2,-0.2 -1,-0.1 2,-0.2 0, 0.0 0.949 92.3 51.2 -69.5 -49.4 45.2 -21.2 20.0 86 363 A T T 4 S+ 0 0 127 1,-0.2 -1,-0.1 3,-0.1 -2,-0.0 0.949 131.1 10.4 -53.3 -64.1 48.5 -22.5 21.5 87 364 A D T 4 S- 0 0 86 2,-0.1 -1,-0.2 0, 0.0 -2,-0.2 0.382 92.6-129.7-101.9 2.7 47.5 -23.2 25.1 88 365 A G < + 0 0 36 -4,-0.8 2,-0.6 1,-0.2 -3,-0.1 0.781 47.5 161.4 55.3 30.2 43.7 -22.9 24.7 89 366 A E - 0 0 131 1,-0.0 -5,-1.7 -6,-0.0 -1,-0.2 -0.736 24.9-150.7 -86.3 121.0 43.5 -20.5 27.7 90 367 A C B -D 83 0D 57 -2,-0.6 -7,-0.2 -7,-0.2 2,-0.2 -0.355 5.4-128.4 -86.2 167.6 40.3 -18.5 27.7 91 368 A S - 0 0 49 -9,-2.0 -1,-0.1 1,-0.2 -11,-0.0 -0.480 49.6 -68.1-101.9 177.8 39.5 -15.1 29.0 92 369 A E - 0 0 163 -2,-0.2 -10,-0.3 1,-0.1 -1,-0.2 -0.314 64.4-103.3 -62.7 153.3 36.5 -14.3 31.3 93 370 A P - 0 0 54 0, 0.0 -12,-0.2 0, 0.0 -1,-0.1 -0.507 28.9-160.9 -83.3 152.5 33.2 -14.7 29.6 94 371 A L E -C 80 0C 121 -14,-2.1 -14,-1.2 -2,-0.2 2,-0.1 -0.994 27.2-112.0-128.1 135.1 31.1 -11.8 28.3 95 372 A P E +C 79 0C 98 0, 0.0 2,-0.3 0, 0.0 -16,-0.2 -0.386 35.6 169.6 -72.3 145.5 27.4 -12.3 27.5 96 373 A F E -C 78 0C 94 -18,-2.0 -18,-2.8 -2,-0.1 2,-0.5 -0.941 20.4-147.9-150.0 129.6 25.9 -12.3 24.1 97 374 A T E -C 77 0C 55 -2,-0.3 -20,-0.3 -20,-0.3 2,-0.2 -0.911 6.0-139.2-115.4 125.2 22.3 -13.4 23.5 98 375 A Y E -C 76 0C 41 -22,-2.7 -22,-2.1 -2,-0.5 -2,-0.0 -0.550 19.7-146.6 -75.0 136.6 21.0 -15.0 20.3 99 376 A L - 0 0 121 -2,-0.2 -27,-0.1 -24,-0.2 -25,-0.1 -0.805 17.1-110.8-106.8 146.3 17.6 -13.9 19.2 100 377 A P 0 0 48 0, 0.0 -27,-0.1 0, 0.0 -1,-0.1 -0.073 360.0 360.0 -65.2 173.7 15.0 -16.0 17.4 101 378 A R 0 0 215 -31,-0.3 -30,-0.1 -29,-0.3 -28,-0.0 0.880 360.0 360.0 -94.0 360.0 14.1 -15.5 13.8