==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-OCT-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIPID TRANSPORT 03-DEC-96 1JTB . COMPND 2 MOLECULE: LIPID TRANSFER PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HORDEUM VULGARE; . AUTHOR M.H.LERCHE,B.B.KRAGELUND,L.M.BECH,F.M.POULSEN . 91 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5289.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 16.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 40.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 222 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 77.9 -9.5 6.5 11.0 2 2 A N + 0 0 87 44,-0.0 4,-0.4 45,-0.0 2,-0.3 0.086 360.0 53.3-174.4 -49.8 -9.0 5.0 7.5 3 3 A a S S+ 0 0 65 1,-0.2 4,-0.2 2,-0.1 0, 0.0 -0.300 85.9 86.9-101.3 48.6 -5.4 5.6 6.3 4 4 A G S >> S+ 0 0 46 -2,-0.3 4,-2.2 2,-0.1 3,-1.2 0.750 85.9 50.4-106.7 -54.8 -3.7 4.2 9.4 5 5 A Q H 3>>S+ 0 0 95 -3,-0.3 4,-2.9 1,-0.2 5,-0.5 0.926 95.9 80.0 -46.4 -46.7 -3.6 0.5 8.4 6 6 A V H 3>5S+ 0 0 27 -4,-0.4 4,-1.3 1,-0.3 -1,-0.2 0.783 109.9 20.1 -19.4 -60.7 -2.1 2.1 5.2 7 7 A D H <>5S+ 0 0 66 -3,-1.2 4,-2.7 2,-0.2 -1,-0.3 0.905 111.5 71.5 -82.4 -50.5 1.2 2.3 7.0 8 8 A S H <5S+ 0 0 86 -4,-2.2 -2,-0.2 1,-0.3 -3,-0.2 0.756 120.3 23.9 -40.2 -35.3 0.7 -0.3 9.8 9 9 A K H <5S+ 0 0 47 -4,-2.9 -1,-0.3 -5,-0.2 -2,-0.2 0.690 133.4 31.6-108.2 -28.3 1.0 -2.7 6.9 10 10 A M H >X S+ 0 0 15 0, 0.0 4,-1.7 0, 0.0 -1,-0.3 0.713 112.7 50.0 -57.1 -21.5 8.4 -0.9 4.4 13 13 A b H <> S+ 0 0 2 -3,-1.7 4,-2.6 2,-0.2 -2,-0.2 0.911 112.0 42.3 -89.8 -42.6 6.9 -0.9 0.9 14 14 A L H X S+ 0 0 45 -4,-2.7 4,-2.7 2,-0.2 5,-0.4 0.990 115.6 52.5 -64.5 -51.0 6.4 2.8 0.4 15 15 A T H X>S+ 0 0 14 -4,-3.1 5,-2.7 -5,-0.3 4,-2.0 0.944 108.7 52.8 -41.8 -61.5 9.8 3.3 2.1 16 16 A Y H ><5S+ 0 0 40 -4,-1.7 3,-0.8 3,-0.2 -1,-0.2 0.911 111.2 43.3 -40.5 -63.2 11.1 0.8 -0.5 17 17 A V H 3<5S+ 0 0 11 -4,-2.6 45,-3.3 1,-0.3 -1,-0.2 0.861 119.0 42.5 -58.9 -37.6 9.6 2.8 -3.6 18 18 A Q H 3<5S- 0 0 49 -4,-2.7 42,-1.1 -3,-0.3 -1,-0.3 0.637 127.2 -98.7 -83.0 -11.3 10.7 6.2 -2.3 19 19 A G T <<5S+ 0 0 58 -4,-2.0 -3,-0.2 -3,-0.8 -4,-0.1 0.747 78.0 124.7 103.4 33.0 14.1 4.8 -1.3 20 20 A G S + 0 0 24 0, 0.0 4,-2.4 0, 0.0 5,-0.5 -0.944 64.9 123.4 -94.4 -14.9 11.2 -3.9 1.6 24 24 A S T 4 S- 0 0 98 1,-0.2 -2,-0.1 2,-0.2 -11,-0.0 -0.023 94.7 -46.6 32.1 -87.5 13.2 -6.7 3.4 25 25 A G T > S+ 0 0 33 -2,-0.2 4,-2.4 3,-0.1 5,-0.3 0.501 132.4 65.6-133.8 -50.1 10.5 -9.1 4.8 26 26 A E H > S+ 0 0 77 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.823 103.0 53.4 -50.6 -37.3 8.0 -6.9 6.6 27 27 A b H X S+ 0 0 0 -4,-2.4 4,-3.3 2,-0.2 5,-0.3 0.998 106.8 47.9 -67.6 -69.2 7.1 -5.4 3.1 28 28 A c H > S+ 0 0 34 -5,-0.5 4,-3.1 1,-0.2 5,-0.3 0.847 121.9 36.3 -36.7 -51.1 6.4 -8.8 1.3 29 29 A N H X S+ 0 0 91 -4,-2.4 4,-3.5 2,-0.2 -1,-0.2 0.983 116.2 52.8 -71.4 -51.7 4.2 -10.0 4.1 30 30 A G H X S+ 0 0 3 -4,-2.5 4,-3.1 -5,-0.3 -2,-0.2 0.858 117.2 43.1 -42.3 -40.8 2.8 -6.5 4.8 31 31 A V H X S+ 0 0 6 -4,-3.3 4,-3.4 2,-0.3 5,-0.2 0.939 113.0 45.9 -68.2 -62.5 1.9 -6.5 1.1 32 32 A R H X S+ 0 0 114 -4,-3.1 4,-2.0 -5,-0.3 5,-0.2 0.938 118.6 49.4 -50.9 -46.2 0.6 -10.1 0.7 33 33 A D H >X S+ 0 0 45 -4,-3.5 4,-2.8 -5,-0.3 3,-1.7 0.970 109.9 46.8 -56.0 -82.8 -1.3 -9.2 3.8 34 34 A L H 3X S+ 0 0 9 -4,-3.1 4,-3.3 1,-0.3 -2,-0.2 0.750 109.1 55.5 -28.7 -52.9 -2.7 -5.8 2.5 35 35 A H H 3< S+ 0 0 53 -4,-3.4 -1,-0.3 1,-0.2 -2,-0.2 0.939 125.3 24.6 -48.2 -50.6 -3.7 -7.4 -0.8 36 36 A N H << S+ 0 0 95 -4,-2.0 3,-0.3 -3,-1.7 -2,-0.3 0.597 127.7 49.8 -88.1 -17.6 -5.8 -9.9 1.3 37 37 A Q H < S+ 0 0 88 -4,-2.8 2,-0.4 -6,-0.2 -3,-0.2 0.804 96.2 65.3 -92.5 -35.5 -6.2 -7.6 4.3 38 38 A A S < S+ 0 0 4 -4,-3.3 6,-1.2 -5,-0.3 7,-0.2 -0.095 75.8 98.2 -83.9 35.3 -7.4 -4.4 2.6 39 39 A Q + 0 0 102 -2,-0.4 -1,-0.2 -3,-0.3 -4,-0.0 -0.307 52.7 94.9-114.9 41.5 -10.6 -6.3 1.6 40 40 A S S S- 0 0 93 -3,-0.1 -2,-0.1 0, 0.0 -1,-0.1 0.870 114.0 -15.0 -97.6 -64.5 -12.8 -5.0 4.5 41 41 A S S S- 0 0 118 -3,-0.0 -2,-0.1 0, 0.0 -3,-0.1 0.115 117.3 -72.5-125.6 16.0 -14.6 -1.9 3.0 42 42 A G > + 0 0 24 -4,-0.1 3,-3.1 3,-0.0 4,-0.5 0.480 69.2 173.7 102.3 10.8 -12.3 -1.6 -0.1 43 43 A D T >> S+ 0 0 33 1,-0.3 4,-3.2 2,-0.2 3,-2.5 0.591 70.5 60.9 -15.0 -59.8 -9.2 -0.3 1.9 44 44 A R H 3> S+ 0 0 25 -6,-1.2 4,-2.0 1,-0.3 -1,-0.3 0.684 102.2 55.5 -52.1 -19.0 -6.7 -0.4 -1.0 45 45 A Q H <> S+ 0 0 57 -3,-3.1 4,-0.6 -7,-0.2 -1,-0.3 0.617 112.6 41.0 -85.2 -19.3 -9.0 2.1 -2.9 46 46 A T H <> S+ 0 0 38 -3,-2.5 4,-1.9 -4,-0.5 3,-0.3 0.843 112.9 54.5 -90.2 -54.1 -8.7 4.4 0.2 47 47 A V H >X S+ 0 0 6 -4,-3.2 4,-3.2 1,-0.2 3,-0.5 0.911 99.1 63.9 -45.0 -54.8 -5.0 3.6 0.4 48 48 A d H 3X S+ 0 0 0 -4,-2.0 4,-3.3 1,-0.3 5,-0.2 0.892 103.9 45.6 -34.8 -64.6 -4.7 4.7 -3.2 49 49 A N H 3X S+ 0 0 89 -4,-0.6 4,-2.6 -3,-0.3 -1,-0.3 0.867 112.7 50.4 -51.2 -41.8 -5.7 8.3 -2.2 50 50 A a H X S+ 0 0 85 -4,-2.4 4,-2.4 -3,-0.4 3,-2.3 0.973 115.9 56.4 -73.3 -49.5 2.2 11.5 -0.3 55 55 A A H 3< S+ 0 0 25 -4,-3.3 -2,-0.2 1,-0.3 -3,-0.2 0.855 86.7 86.7 -37.9 -49.0 3.4 10.5 -3.8 56 56 A R T 3< S- 0 0 206 -4,-2.6 -1,-0.3 -5,-0.3 -2,-0.2 0.654 120.2 -8.8 -19.7 -50.1 2.2 14.0 -4.7 57 57 A G T <4 S+ 0 0 64 -3,-2.3 -1,-0.2 -4,-0.3 -2,-0.2 0.634 96.5 147.3-125.8 -40.6 5.7 15.3 -3.8 58 58 A I < - 0 0 48 -4,-2.4 -3,-0.1 -5,-0.2 -2,-0.0 0.486 52.7 -94.4 24.1-164.3 7.6 12.3 -2.1 59 59 A H S S- 0 0 132 0, 0.0 2,-0.1 0, 0.0 -40,-0.1 0.759 88.5 -15.1-104.8 -84.9 11.4 11.6 -2.3 60 60 A N - 0 0 100 -42,-1.1 2,-0.3 2,-0.0 -2,-0.1 -0.498 61.9-156.9-128.5 65.6 12.7 9.2 -5.0 61 61 A L - 0 0 72 1,-0.1 2,-1.3 -2,-0.1 -43,-0.2 -0.171 7.5-172.0 -48.6 103.8 9.8 7.2 -6.5 62 62 A N >> + 0 0 79 -45,-3.3 4,-2.1 -2,-0.3 3,-1.2 -0.568 9.4 175.2 -97.1 65.2 11.6 4.1 -7.9 63 63 A L H 3> S+ 0 0 52 -2,-1.3 4,-3.5 1,-0.3 5,-0.4 0.858 74.7 63.1 -43.2 -41.1 8.4 2.9 -9.6 64 64 A N H 3> S+ 0 0 124 1,-0.2 4,-0.6 2,-0.2 -1,-0.3 0.942 107.0 43.8 -51.3 -47.5 10.4 0.0 -11.2 65 65 A N H X4 S+ 0 0 15 -3,-1.2 3,-0.8 2,-0.2 4,-0.5 0.951 113.7 51.1 -62.4 -47.7 11.0 -1.2 -7.7 66 66 A A H >< S+ 0 0 18 -4,-2.1 3,-1.6 1,-0.3 -2,-0.2 0.932 110.9 46.7 -54.8 -50.3 7.3 -0.6 -6.8 67 67 A A H 3< S+ 0 0 39 -4,-3.5 4,-0.4 1,-0.3 -1,-0.3 0.620 112.5 53.6 -67.9 -13.5 6.1 -2.6 -9.9 68 68 A S T S+ 0 0 22 -3,-1.6 4,-3.0 -4,-0.5 -2,-0.2 0.978 92.6 45.0 -58.7 -50.2 7.1 -5.2 -5.2 70 70 A P H 4>S+ 0 0 19 0, 0.0 5,-1.5 0, 0.0 6,-0.4 0.906 115.3 44.7 -63.0 -47.1 4.4 -7.8 -6.3 71 71 A S H >45S+ 0 0 104 -4,-0.4 3,-0.6 1,-0.2 -2,-0.2 0.839 118.5 44.9 -60.7 -41.4 6.8 -10.1 -8.2 72 72 A K H 3<5S+ 0 0 84 -4,-2.0 -1,-0.2 1,-0.2 -3,-0.2 0.847 118.6 43.6 -72.5 -39.8 9.3 -9.9 -5.4 73 73 A c T 3<5S- 0 0 5 -4,-3.0 -1,-0.2 -5,-0.3 -2,-0.2 -0.184 98.8-124.2-104.0 39.2 6.6 -10.4 -2.7 74 74 A N T < 5S+ 0 0 104 -3,-0.6 -3,-0.2 1,-0.2 -2,-0.1 0.738 73.6 124.4 19.9 54.5 4.4 -13.3 -4.1 75 75 A V < - 0 0 4 -5,-1.5 -1,-0.2 -6,-0.1 -4,-0.1 0.255 44.9-168.6-118.7 12.0 1.2 -11.1 -3.8 76 76 A N + 0 0 122 -6,-0.4 -5,-0.0 2,-0.1 -2,-0.0 0.379 31.2 140.2 -3.8 55.9 0.1 -11.4 -7.5 77 77 A V - 0 0 19 1,-0.1 -2,-0.1 2,-0.0 -1,-0.0 -0.935 55.6-135.7-113.6 136.2 -2.6 -8.6 -7.5 78 78 A P + 0 0 77 0, 0.0 2,-0.6 0, 0.0 -1,-0.1 0.634 38.1 170.8 -67.4 -13.8 -2.8 -6.3 -10.6 79 79 A Y - 0 0 34 1,-0.2 2,-3.2 2,-0.1 3,-0.3 0.379 57.3 -99.2 7.3 35.8 -3.1 -3.3 -8.2 80 80 A T - 0 0 33 9,-0.9 -1,-0.2 -2,-0.6 10,-0.1 -0.300 46.3-150.5 66.2 -63.6 -2.8 -0.5 -10.9 81 81 A I + 0 0 44 -2,-3.2 -1,-0.2 1,-0.2 -14,-0.1 0.955 41.7 129.7 64.4 59.0 1.0 -0.1 -10.0 82 82 A S > - 0 0 59 -3,-0.3 3,-2.5 1,-0.1 -1,-0.2 -0.977 68.1-104.7-147.9 162.8 1.7 3.7 -10.8 83 83 A P T 3 S+ 0 0 59 0, 0.0 -1,-0.1 0, 0.0 -28,-0.1 0.796 122.6 23.6 -51.3 -46.2 3.1 7.1 -9.6 84 84 A D T 3 S- 0 0 97 -29,-0.1 -32,-0.1 -28,-0.0 -31,-0.0 -0.295 101.5-151.3-112.7 36.6 -0.2 8.7 -8.9 85 85 A I < - 0 0 10 -3,-2.5 2,-0.5 1,-0.1 -33,-0.2 0.363 2.1-136.6 -16.5 124.0 -2.0 5.4 -8.5 86 86 A D > - 0 0 52 1,-0.1 3,-1.3 -34,-0.0 -1,-0.1 -0.812 2.1-145.7 -96.2 130.5 -5.8 5.4 -9.4 87 87 A d G > S+ 0 0 23 -2,-0.5 3,-1.0 1,-0.2 -1,-0.1 0.742 94.4 69.1 -64.8 -24.9 -8.1 3.6 -7.0 88 88 A S G 3 S+ 0 0 108 1,-0.2 -1,-0.2 -43,-0.1 -8,-0.1 0.567 94.8 52.9 -74.8 -10.2 -10.3 2.6 -10.0 89 89 A R G < S+ 0 0 146 -3,-1.3 -9,-0.9 -10,-0.1 -1,-0.2 0.092 90.6 98.1-113.4 22.6 -7.7 0.2 -11.5 90 90 A I < 0 0 13 -3,-1.0 -45,-0.0 -11,-0.2 -3,-0.0 -0.597 360.0 360.0-103.7 164.0 -7.1 -1.9 -8.3 91 91 A Y 0 0 167 -2,-0.2 -1,-0.1 -47,-0.0 -46,-0.1 0.504 360.0 360.0-131.5 360.0 -8.6 -5.2 -7.3