==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 21-JUL-07 2JTA . COMPND 2 MOLECULE: 10-MER UBIQUITIN PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.JAREMKO,L.JAREMKO,I.ZHUKOV,M.CEBRAT . 10 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1102.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 139 0, 0.0 2,-0.3 0, 0.0 9,-0.1 0.000 360.0 360.0 360.0 -85.9 0.1 4.9 3.4 2 2 A E > - 0 0 100 1,-0.1 4,-1.1 4,-0.1 8,-0.3 -0.971 360.0-138.1-159.6 144.9 0.7 2.5 0.5 3 3 A D T 4 S+ 0 0 86 -2,-0.3 3,-0.5 1,-0.2 7,-0.3 0.894 114.1 55.9 -70.5 -34.8 -0.8 -0.7 -1.0 4 4 A G T 4 S+ 0 0 71 1,-0.3 3,-0.3 2,-0.2 -1,-0.2 0.852 99.1 60.7 -62.0 -31.2 2.8 -1.8 -1.5 5 5 A R T 4 S- 0 0 154 1,-0.3 -1,-0.3 5,-0.0 -2,-0.2 0.891 140.0 -21.5 -60.6 -37.7 3.1 -1.1 2.2 6 6 A T S >X S- 0 0 60 -4,-1.1 3,-2.7 -3,-0.5 4,-2.2 -0.562 85.7 -99.7-176.5 101.6 0.4 -3.8 2.6 7 7 A L T 34 S- 0 0 140 1,-0.3 -3,-0.1 -3,-0.3 -4,-0.1 0.130 103.0 -14.6 -28.4 127.3 -1.9 -4.8 -0.3 8 8 A S T 34 S+ 0 0 118 1,-0.2 -1,-0.3 2,-0.1 -5,-0.1 0.781 138.8 68.3 40.2 33.0 -5.3 -3.1 0.2 9 9 A D T <4 0 0 119 -3,-2.7 -2,-0.2 -7,-0.2 -1,-0.2 0.478 360.0 360.0-136.6 -66.1 -4.1 -2.4 3.7 10 10 A Y < 0 0 115 -4,-2.2 -7,-0.1 -7,-0.3 -3,-0.1 0.723 360.0 360.0 74.4 360.0 -1.2 0.1 4.0