==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 28-JUL-07 2JTE . COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR N.A.J.VAN NULAND,R.J.ORTEGA,M.ROMERO ROMERO,E.AB,A.ORA, . 64 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4300.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 71.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 35.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 108 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -48.6 -14.2 -9.3 4.7 2 2 A A - 0 0 40 2,-0.0 2,-0.4 1,-0.0 35,-0.0 -0.508 360.0-154.1 -85.5 156.9 -12.8 -6.3 2.9 3 3 A M - 0 0 155 -2,-0.2 2,-1.2 32,-0.0 32,-0.1 -0.883 11.1-141.6-139.1 99.5 -14.4 -4.8 -0.1 4 4 A G + 0 0 57 -2,-0.4 -2,-0.0 1,-0.2 31,-0.0 -0.494 33.8 160.4 -64.1 95.3 -12.3 -3.0 -2.6 5 5 A A S S- 0 0 60 -2,-1.2 -1,-0.2 1,-0.0 0, 0.0 0.092 81.4 -67.2-103.6 23.5 -14.6 -0.2 -3.6 6 6 A K S S- 0 0 148 27,-0.2 2,-0.3 28,-0.1 28,-0.1 0.885 73.8-175.4 81.0 75.5 -11.6 1.8 -4.8 7 7 A E E -A 33 0A 19 26,-0.6 26,-2.1 27,-0.0 2,-0.3 -0.733 6.2-164.2 -98.5 151.3 -9.8 2.5 -1.7 8 8 A Y E -A 32 0A 85 56,-2.5 55,-3.2 -2,-0.3 56,-2.1 -0.983 3.1-168.0-139.0 149.4 -6.6 4.7 -1.5 9 9 A C E -AB 31 62A 0 22,-2.2 22,-3.2 -2,-0.3 2,-0.4 -0.916 13.2-139.2-137.6 157.7 -4.0 5.2 1.1 10 10 A R E -AB 30 61A 101 51,-3.3 51,-3.0 -2,-0.3 2,-0.3 -0.969 23.9-122.2-119.3 138.1 -1.1 7.5 1.8 11 11 A T E - B 0 60A 0 18,-1.5 17,-1.7 -2,-0.4 49,-0.3 -0.592 18.8-172.6 -78.2 134.3 2.2 6.5 3.1 12 12 A L S S+ 0 0 83 47,-3.2 48,-0.2 -2,-0.3 -1,-0.1 0.584 78.6 25.1 -98.3 -18.1 3.3 8.0 6.4 13 13 A F S S- 0 0 123 46,-1.4 -1,-0.2 13,-0.2 2,-0.2 -0.968 85.9-111.8-142.6 150.1 6.7 6.5 6.2 14 14 A P - 0 0 81 0, 0.0 2,-0.4 0, 0.0 12,-0.2 -0.492 31.8-167.2 -78.5 157.8 8.9 5.4 3.3 15 15 A Y B -F 25 0B 49 10,-2.6 10,-2.5 -2,-0.2 2,-0.6 -0.977 15.6-140.0-150.7 132.9 9.6 1.7 2.8 16 16 A T - 0 0 102 -2,-0.4 2,-0.5 8,-0.2 8,-0.2 -0.847 19.7-136.5 -96.1 122.4 12.1 -0.1 0.7 17 17 A G - 0 0 14 -2,-0.6 7,-0.1 1,-0.2 38,-0.0 -0.671 19.9-177.8 -79.8 126.0 10.8 -3.3 -0.9 18 18 A T S S+ 0 0 117 -2,-0.5 -1,-0.2 5,-0.1 2,-0.2 0.800 72.5 54.6 -90.6 -36.4 13.3 -6.0 -0.6 19 19 A N S S- 0 0 102 -3,-0.1 3,-0.3 1,-0.1 5,-0.0 -0.463 85.9-126.2 -89.1 166.1 11.1 -8.4 -2.5 20 20 A E S S+ 0 0 185 1,-0.2 4,-0.1 -2,-0.2 -1,-0.1 0.818 115.0 53.6 -81.8 -33.2 9.7 -7.7 -5.9 21 21 A D S S+ 0 0 113 32,-0.1 33,-3.4 2,-0.1 2,-0.5 0.386 97.1 86.8 -77.7 3.3 6.2 -8.4 -4.6 22 22 A E B S-c 54 0A 12 31,-0.3 2,-0.4 -3,-0.3 33,-0.2 -0.916 84.5-125.8-110.8 128.4 7.0 -5.9 -1.9 23 23 A L - 0 0 7 31,-1.7 2,-0.6 -2,-0.5 -5,-0.1 -0.625 11.8-149.3 -85.7 125.4 6.2 -2.3 -2.8 24 24 A T + 0 0 83 -2,-0.4 2,-0.3 -8,-0.2 -8,-0.2 -0.837 32.1 167.2 -90.3 119.4 9.0 0.3 -2.5 25 25 A F B -F 15 0B 8 -10,-2.5 -10,-2.6 -2,-0.6 2,-0.2 -0.932 30.4-141.1-135.4 159.1 7.4 3.6 -1.6 26 26 A R > - 0 0 182 -2,-0.3 3,-0.6 -12,-0.2 2,-0.4 -0.394 43.6 -83.7-100.1-178.4 8.3 7.1 -0.4 27 27 A E T 3 S+ 0 0 89 1,-0.2 -15,-0.2 -2,-0.2 3,-0.1 -0.751 110.6 33.7 -91.8 137.7 6.3 9.2 2.1 28 28 A G T 3 S+ 0 0 27 -17,-1.7 2,-0.5 -2,-0.4 -1,-0.2 0.610 82.5 142.4 95.8 15.7 3.3 11.2 0.7 29 29 A E < - 0 0 48 -3,-0.6 -18,-1.5 -18,-0.1 2,-0.7 -0.776 46.4-143.4 -95.9 127.3 2.5 8.6 -1.9 30 30 A I E -A 10 0A 84 -2,-0.5 2,-0.4 -20,-0.2 -20,-0.2 -0.841 25.0-163.3 -87.7 116.6 -1.2 8.0 -2.7 31 31 A I E -A 9 0A 0 -22,-3.2 -22,-2.2 -2,-0.7 2,-0.8 -0.820 21.3-122.9-106.0 144.1 -1.4 4.3 -3.4 32 32 A H E -AD 8 47A 82 15,-2.8 15,-3.0 -2,-0.4 2,-0.4 -0.764 31.0-135.9 -88.5 109.3 -4.2 2.5 -5.1 33 33 A L E +AD 7 46A 10 -26,-2.1 -26,-0.6 -2,-0.8 13,-0.3 -0.549 30.1 172.5 -73.1 124.8 -5.4 -0.0 -2.6 34 34 A I E - 0 0 61 11,-2.8 2,-0.3 -2,-0.4 12,-0.2 0.854 64.9 -5.9 -97.4 -51.4 -6.0 -3.3 -4.3 35 35 A S E - D 0 45A 47 10,-2.1 10,-3.5 1,-0.1 -1,-0.3 -0.989 38.1-168.5-152.1 134.6 -6.6 -5.7 -1.4 36 36 A K S S+ 0 0 54 -2,-0.3 2,-0.9 8,-0.2 6,-0.4 0.694 88.3 66.9 -90.3 -25.8 -6.5 -5.4 2.4 37 37 A E + 0 0 114 1,-0.2 -1,-0.2 4,-0.1 4,-0.1 -0.853 51.4 157.1 -96.4 103.1 -6.8 -9.1 2.6 38 38 A T S S- 0 0 51 2,-1.0 -1,-0.2 -2,-0.9 3,-0.1 0.225 77.7 -89.7-104.1 8.8 -3.7 -10.6 1.2 39 39 A G S S+ 0 0 83 1,-0.3 2,-0.4 4,-0.1 -2,-0.1 0.013 112.1 78.7 102.0 -22.3 -4.2 -13.7 3.1 40 40 A E S > S- 0 0 116 3,-0.2 -2,-1.0 -4,-0.1 2,-0.8 -0.885 82.7-123.7-119.1 146.9 -2.3 -12.2 5.9 41 41 A A T 3 S+ 0 0 94 -2,-0.4 3,-0.1 1,-0.2 -4,-0.1 -0.816 99.0 31.6 -90.9 110.0 -3.4 -9.7 8.5 42 42 A G T 3 S+ 0 0 26 -2,-0.8 15,-2.7 -6,-0.4 2,-0.5 0.059 96.5 92.8 132.7 -23.5 -1.0 -6.8 8.3 43 43 A W E < - E 0 56A 92 -3,-0.5 -5,-0.5 13,-0.3 2,-0.3 -0.893 52.1-170.0-107.1 126.9 -0.1 -6.8 4.7 44 44 A W E - E 0 55A 35 11,-3.3 11,-2.3 -2,-0.5 2,-0.5 -0.828 16.4-136.0-108.9 150.6 -2.0 -4.8 2.2 45 45 A K E +DE 35 54A 59 -10,-3.5 -11,-2.8 -2,-0.3 -10,-2.1 -0.948 33.4 163.7-108.6 129.1 -1.7 -4.9 -1.5 46 46 A G E -DE 33 53A 0 7,-2.4 7,-2.2 -2,-0.5 2,-0.5 -0.925 32.4-129.9-140.8 160.5 -1.5 -1.7 -3.3 47 47 A E E +DE 32 52A 43 -15,-3.0 -15,-2.8 -2,-0.3 2,-0.4 -0.973 32.5 159.4-117.8 123.8 -0.5 -0.4 -6.6 48 48 A L E > - E 0 51A 16 3,-2.8 3,-2.2 -2,-0.5 -24,-0.1 -0.986 67.5 -0.7-142.8 133.7 1.8 2.4 -6.9 49 49 A N T 3 S- 0 0 118 -2,-0.4 3,-0.1 1,-0.3 -18,-0.0 0.635 131.8 -53.7 67.7 17.5 3.9 3.5 -9.8 50 50 A G T 3 S+ 0 0 66 1,-0.3 2,-0.5 0, 0.0 -1,-0.3 0.463 117.0 111.9 95.0 3.1 2.6 0.6 -11.9 51 51 A K E < - E 0 48A 112 -3,-2.2 -3,-2.8 -27,-0.1 2,-0.6 -0.947 46.9-167.7-115.8 125.7 3.6 -1.9 -9.2 52 52 A E E + E 0 47A 110 -2,-0.5 -5,-0.3 -5,-0.3 2,-0.2 -0.946 33.7 127.7-112.4 112.9 1.1 -3.8 -7.3 53 53 A G E - E 0 46A 5 -7,-2.2 -7,-2.4 -2,-0.6 2,-0.3 -0.768 53.5 -81.2-145.8-166.7 2.6 -5.6 -4.4 54 54 A V E +cE 22 45A 41 -33,-3.4 -31,-1.7 -9,-0.3 -9,-0.2 -0.752 37.7 168.3-114.2 151.1 2.2 -6.0 -0.7 55 55 A F E - E 0 44A 0 -11,-2.3 -11,-3.3 -2,-0.3 2,-0.3 -0.975 44.0 -90.6-154.5 150.5 3.3 -3.9 2.2 56 56 A P E > - E 0 43A 21 0, 0.0 3,-1.7 0, 0.0 -13,-0.3 -0.553 32.1-136.8 -66.9 130.7 2.7 -3.7 6.0 57 57 A D G > S+ 0 0 50 -15,-2.7 3,-1.4 -2,-0.3 -14,-0.1 0.600 93.8 82.3 -67.8 -9.5 -0.3 -1.4 6.6 58 58 A N G 3 S+ 0 0 129 -16,-0.4 -1,-0.3 1,-0.3 -15,-0.1 0.656 85.6 58.2 -68.9 -16.7 1.6 0.2 9.5 59 59 A F G < S+ 0 0 53 -3,-1.7 -47,-3.2 -47,-0.1 -46,-1.4 0.502 107.0 52.5 -91.5 -3.9 3.4 2.4 7.0 60 60 A A E < -B 11 0A 14 -3,-1.4 2,-0.4 -49,-0.3 -49,-0.3 -0.856 60.3-148.8-135.1 163.2 0.3 3.9 5.7 61 61 A V E -B 10 0A 66 -51,-3.0 -51,-3.3 -2,-0.3 2,-0.3 -0.963 33.7-114.7-126.2 142.6 -3.0 5.7 6.6 62 62 A Q E -B 9 0A 57 -2,-0.4 -53,-0.3 -53,-0.3 -55,-0.0 -0.587 26.1-178.0 -86.8 144.5 -6.0 5.2 4.5 63 63 A I 0 0 99 -55,-3.2 -54,-0.2 1,-0.5 -1,-0.2 0.774 360.0 360.0-103.0 -44.3 -7.5 8.2 2.5 64 64 A S 0 0 94 -56,-2.1 -56,-2.5 0, 0.0 -1,-0.5 -0.995 360.0 360.0-137.4 360.0 -10.5 6.5 1.0