==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 03-AUG-07 2JTM . COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; . AUTHOR Y.FENG,L.GUO,L.HUANG,J.WANG . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4657.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 48.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 30.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 190 0, 0.0 2,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 164.7 -7.2 2.7 12.4 2 2 A S - 0 0 103 3,-0.1 2,-0.6 1,-0.1 0, 0.0 -0.437 360.0-119.1 -70.2 137.6 -8.4 5.3 9.9 3 3 A S S S+ 0 0 127 -2,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.689 87.1 33.9 -83.6 120.2 -10.4 4.0 7.0 4 4 A G S S+ 0 0 69 -2,-0.6 2,-0.3 0, 0.0 -1,-0.1 -0.680 110.5 16.1 144.0 -84.1 -8.8 4.7 3.7 5 5 A K - 0 0 116 -2,-0.2 -3,-0.1 16,-0.0 18,-0.1 -0.763 56.2-146.3-123.0 167.2 -5.1 4.7 3.6 6 6 A K - 0 0 57 16,-0.3 2,-0.2 -2,-0.3 14,-0.0 -0.993 14.2-147.4-138.6 122.0 -2.3 3.4 5.8 7 7 A P - 0 0 78 0, 0.0 2,-0.3 0, 0.0 14,-0.3 -0.609 8.5-160.8 -92.5 155.7 1.2 5.1 6.3 8 8 A V E -A 20 0A 21 12,-2.8 12,-1.8 -2,-0.2 2,-0.8 -0.924 31.5-103.8-131.0 152.0 4.5 3.5 7.0 9 9 A K E +A 19 0A 144 -2,-0.3 2,-0.4 10,-0.3 10,-0.3 -0.704 56.4 170.9 -76.5 110.9 7.8 4.9 8.3 10 10 A V E -A 18 0A 3 8,-3.0 8,-2.3 -2,-0.8 2,-0.3 -0.946 35.7-123.4-132.7 144.7 9.9 5.2 5.2 11 11 A K E -A 17 0A 125 -2,-0.4 6,-0.3 6,-0.2 9,-0.0 -0.675 30.8-135.1 -81.6 139.1 13.2 6.7 4.2 12 12 A T > - 0 0 10 4,-3.3 3,-1.5 -2,-0.3 4,-0.0 -0.615 17.2-118.4 -94.0 159.1 13.0 9.2 1.5 13 13 A P T 3 S+ 0 0 78 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.682 115.2 61.2 -67.2 -17.4 15.5 9.3 -1.6 14 14 A A T 3 S- 0 0 45 2,-0.0 -3,-0.0 0, 0.0 29,-0.0 0.566 126.8 -97.8 -86.1 -11.5 16.5 12.7 -0.3 15 15 A G S < S+ 0 0 65 -3,-1.5 2,-0.2 1,-0.3 -4,-0.0 0.663 82.2 124.8 104.5 20.1 17.7 11.3 3.0 16 16 A K - 0 0 103 -4,-0.0 -4,-3.3 2,-0.0 2,-0.4 -0.610 49.2-143.6-104.2 167.9 14.8 12.0 5.2 17 17 A E E +A 11 0A 135 -6,-0.3 2,-0.3 -2,-0.2 -6,-0.2 -0.968 36.4 140.5-135.9 115.0 12.8 9.7 7.3 18 18 A A E -A 10 0A 36 -8,-2.3 -8,-3.0 -2,-0.4 2,-1.0 -0.947 56.0-101.2-148.3 163.9 9.1 10.3 7.6 19 19 A E E +A 9 0A 123 -2,-0.3 2,-0.3 -10,-0.3 -10,-0.3 -0.830 49.4 178.3 -96.2 105.1 5.9 8.3 7.8 20 20 A L E -A 8 0A 30 -12,-1.8 -12,-2.8 -2,-1.0 23,-0.0 -0.736 27.4-124.3-108.7 152.7 4.5 8.5 4.4 21 21 A V - 0 0 54 -2,-0.3 2,-0.3 -14,-0.3 21,-0.3 -0.856 26.0-123.3-100.0 126.4 1.4 7.0 3.0 22 22 A P - 0 0 12 0, 0.0 -16,-0.3 0, 0.0 19,-0.2 -0.560 14.2-160.1 -70.1 130.5 1.7 4.8 -0.1 23 23 A E S S+ 0 0 98 17,-3.4 2,-0.4 -2,-0.3 18,-0.1 0.729 81.3 20.8 -81.4 -27.4 -0.4 6.0 -3.0 24 24 A K E S-B 40 0B 129 16,-0.8 16,-2.6 2,-0.0 2,-0.4 -0.985 72.2-166.1-144.2 131.1 -0.3 2.7 -4.7 25 25 A V E +B 39 0B 57 -2,-0.4 2,-0.3 14,-0.2 14,-0.2 -0.968 10.7 169.6-123.0 138.7 0.5 -0.6 -3.2 26 26 A W E -B 38 0B 72 12,-2.7 12,-3.0 -2,-0.4 2,-0.3 -0.966 18.1-140.0-142.1 158.4 1.3 -3.9 -4.9 27 27 A A E -B 37 0B 55 -2,-0.3 2,-0.4 10,-0.2 10,-0.3 -0.849 9.6-160.4-123.6 154.2 2.6 -7.2 -3.9 28 28 A L E +B 36 0B 85 8,-3.2 8,-1.5 -2,-0.3 6,-0.1 -0.898 21.0 177.0-129.7 96.1 5.0 -9.8 -5.2 29 29 A A - 0 0 81 -2,-0.4 2,-0.3 6,-0.3 6,-0.2 -0.849 6.7-171.2-111.5 96.1 4.2 -13.0 -3.5 30 30 A P > - 0 0 68 0, 0.0 3,-2.0 0, 0.0 2,-0.2 -0.663 35.4-103.9 -82.2 139.4 6.3 -16.0 -4.7 31 31 A K T 3 S+ 0 0 210 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 -0.442 108.5 18.5 -66.5 126.9 5.3 -19.4 -3.4 32 32 A G T 3 S+ 0 0 71 1,-0.4 -1,-0.3 -2,-0.2 2,-0.2 0.398 119.3 78.7 91.9 -2.3 7.6 -20.6 -0.7 33 33 A R S < S- 0 0 187 -3,-2.0 -1,-0.4 3,-0.0 2,-0.3 -0.439 90.7 -85.0-118.6-167.5 8.8 -17.0 -0.1 34 34 A K - 0 0 130 -2,-0.2 2,-1.6 -3,-0.1 -6,-0.1 -0.810 39.9-107.9-107.9 150.1 7.3 -14.1 1.7 35 35 A G - 0 0 19 -2,-0.3 -6,-0.3 -6,-0.2 2,-0.1 -0.592 40.2-164.5 -80.6 90.6 4.8 -11.7 0.1 36 36 A V E -B 28 0B 58 -2,-1.6 -8,-3.2 -8,-1.5 2,-0.3 -0.379 3.3-156.0 -75.3 151.8 6.8 -8.6 -0.4 37 37 A K E -BC 27 54B 31 17,-0.9 17,-2.6 -10,-0.3 2,-0.4 -0.903 8.4-161.2-130.2 151.4 5.0 -5.4 -1.0 38 38 A I E -BC 26 53B 25 -12,-3.0 -12,-2.7 -2,-0.3 2,-0.4 -0.998 6.7-167.9-136.8 136.0 5.9 -2.2 -2.7 39 39 A G E -BC 25 52B 0 13,-3.0 13,-2.8 -2,-0.4 2,-0.5 -0.943 20.2-128.6-124.8 147.3 4.3 1.1 -2.4 40 40 A L E +BC 24 51B 48 -16,-2.6 -17,-3.4 -2,-0.4 -16,-0.8 -0.854 35.2 177.2 -95.3 126.2 4.6 4.3 -4.4 41 41 A F E - C 0 50B 0 9,-3.6 9,-2.3 -2,-0.5 2,-0.5 -0.714 28.9-118.8-121.2 170.9 5.2 7.3 -2.2 42 42 A K E - C 0 49B 101 -21,-0.3 7,-0.3 7,-0.3 6,-0.1 -0.967 23.3-133.5-113.6 128.9 5.9 11.0 -2.8 43 43 A D > - 0 0 0 5,-3.6 4,-1.3 -2,-0.5 -31,-0.0 -0.726 9.9-155.7 -80.6 121.8 9.2 12.4 -1.6 44 44 A P T 4 S+ 0 0 82 0, 0.0 -1,-0.1 0, 0.0 -32,-0.0 0.484 87.7 54.6 -78.7 -1.6 8.4 15.7 0.3 45 45 A E T 4 S+ 0 0 103 3,-0.1 -2,-0.0 -29,-0.0 -3,-0.0 0.889 126.1 13.4 -97.4 -50.6 11.9 17.0 -0.3 46 46 A T T 4 S- 0 0 89 2,-0.1 3,-0.1 0, 0.0 -4,-0.0 0.815 96.4-125.7 -94.4 -37.3 12.2 16.8 -4.1 47 47 A G < + 0 0 28 -4,-1.3 2,-0.0 1,-0.3 0, 0.0 0.281 63.4 130.6 108.3 -6.0 8.6 16.2 -4.9 48 48 A K - 0 0 124 -6,-0.1 -5,-3.6 1,-0.1 2,-0.5 -0.237 59.2-114.6 -80.0 163.6 9.1 13.0 -6.9 49 49 A Y E -C 42 0B 131 -7,-0.3 2,-0.4 -3,-0.1 -7,-0.3 -0.858 34.6-175.4 -97.9 131.5 7.3 9.8 -6.6 50 50 A F E -C 41 0B 21 -9,-2.3 -9,-3.6 -2,-0.5 2,-0.4 -0.980 19.7-136.4-129.1 139.6 9.4 6.9 -5.4 51 51 A R E +C 40 0B 177 -2,-0.4 2,-0.3 -11,-0.3 -11,-0.3 -0.758 26.7 177.9 -91.2 142.3 8.5 3.3 -5.0 52 52 A H E -C 39 0B 66 -13,-2.8 -13,-3.0 -2,-0.4 2,-0.2 -0.990 32.4-107.4-146.8 136.1 9.7 1.5 -1.9 53 53 A K E -C 38 0B 126 -2,-0.3 -15,-0.3 -15,-0.3 3,-0.1 -0.418 33.2-150.1 -64.3 135.4 9.2 -2.0 -0.6 54 54 A L E -C 37 0B 1 -17,-2.6 -17,-0.9 -2,-0.2 2,-0.1 -0.488 33.6 -79.0 -97.1 170.0 6.9 -2.2 2.3 55 55 A P > - 0 0 60 0, 0.0 3,-1.1 0, 0.0 -1,-0.2 -0.390 37.0-123.5 -66.9 151.6 7.2 -4.9 5.0 56 56 A D T 3 S+ 0 0 61 1,-0.3 -21,-0.2 -20,-0.1 -2,-0.0 0.739 113.2 51.3 -72.0 -19.1 5.8 -8.2 4.1 57 57 A D T 3 S+ 0 0 144 2,-0.1 -1,-0.3 -20,-0.1 -21,-0.1 0.475 81.6 124.1 -93.9 -1.8 3.4 -8.1 7.1 58 58 A Y S < S- 0 0 22 -3,-1.1 2,-0.8 1,-0.1 -4,-0.1 -0.376 70.4-114.7 -65.7 127.2 2.2 -4.7 6.1 59 59 A P 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.512 360.0 360.0 -72.6 104.5 -1.6 -4.7 5.7 60 60 A I 0 0 98 -2,-0.8 -33,-0.0 -3,-0.0 -2,-0.0 -0.935 360.0 360.0-118.1 360.0 -2.6 -4.0 2.1