==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 08-AUG-07 2JTX . COMPND 2 MOLECULE: TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR P.DI LELLO,J.G.OMICHINSKI . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6005.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 53.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 8.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 380 A D 0 0 211 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -63.6 -37.2 -7.6 -10.7 2 381 A E - 0 0 170 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.782 360.0-117.2-109.8 154.0 -33.8 -7.2 -9.1 3 382 A E - 0 0 155 -2,-0.3 3,-0.3 1,-0.1 0, 0.0 -0.736 10.2-158.7 -92.2 135.3 -30.4 -8.2 -10.4 4 383 A E + 0 0 182 -2,-0.4 -1,-0.1 1,-0.2 -2,-0.0 -0.021 67.5 103.9 -99.7 29.0 -28.4 -10.9 -8.6 5 384 A D + 0 0 137 2,-0.0 2,-0.7 0, 0.0 -1,-0.2 0.183 49.5 112.5 -93.9 16.3 -25.1 -9.6 -10.1 6 385 A D + 0 0 107 -3,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.817 39.4 162.1 -95.5 112.0 -24.1 -8.0 -6.8 7 386 A E - 0 0 147 -2,-0.7 2,-0.5 2,-0.0 -2,-0.0 -0.989 25.3-151.4-132.6 139.9 -21.1 -9.7 -5.1 8 387 A F + 0 0 178 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.940 24.9 159.2-114.3 126.5 -18.8 -8.6 -2.4 9 388 A E - 0 0 147 -2,-0.5 2,-0.1 2,-0.0 -2,-0.0 -0.981 21.4-175.1-143.7 154.0 -15.2 -9.8 -2.2 10 389 A E + 0 0 183 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.556 32.4 132.1-152.1 79.9 -11.9 -8.7 -0.7 11 390 A V + 0 0 143 -2,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.992 17.7 126.5-137.3 129.0 -8.9 -10.9 -1.5 12 391 A A - 0 0 95 -2,-0.4 2,-0.2 3,-0.0 -2,-0.0 -0.907 51.8-103.9-175.9 147.5 -5.4 -9.8 -2.7 13 392 A D - 0 0 150 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.573 46.2-101.6 -81.2 140.8 -1.7 -10.2 -1.8 14 393 A D - 0 0 94 -2,-0.2 -1,-0.1 1,-0.1 2,-0.0 -0.312 41.1-116.4 -60.9 140.0 0.1 -7.3 -0.1 15 394 A P - 0 0 47 0, 0.0 11,-1.4 0, 0.0 2,-0.4 -0.239 24.4-111.6 -74.5 166.0 2.2 -5.1 -2.5 16 395 A I E -A 25 0A 107 9,-0.2 2,-0.4 10,-0.1 9,-0.2 -0.851 26.7-160.7-104.4 135.0 6.0 -4.8 -2.3 17 396 A V E -A 24 0A 2 7,-3.6 7,-2.1 -2,-0.4 2,-0.7 -0.902 18.0-126.4-115.6 142.6 7.7 -1.5 -1.3 18 397 A M E -A 23 0A 85 -2,-0.4 2,-0.5 5,-0.2 29,-0.1 -0.777 27.6-173.3 -90.8 113.8 11.3 -0.5 -1.9 19 398 A V E > S-A 22 0A 4 3,-3.6 3,-0.9 -2,-0.7 20,-0.1 -0.929 70.8 -21.0-111.7 120.9 13.0 0.6 1.3 20 399 A A T 3 S- 0 0 49 -2,-0.5 -1,-0.2 1,-0.3 19,-0.1 0.780 131.5 -48.8 55.2 27.3 16.5 2.1 1.1 21 400 A G T 3 S+ 0 0 49 1,-0.3 -1,-0.3 19,-0.1 -3,-0.1 0.728 121.7 104.0 85.5 23.5 16.8 0.4 -2.3 22 401 A R E < S-A 19 0A 172 -3,-0.9 -3,-3.6 -5,-0.0 -1,-0.3 -0.968 76.4 -98.2-137.0 152.3 15.6 -3.0 -1.1 23 402 A P E +A 18 0A 91 0, 0.0 2,-0.3 0, 0.0 -5,-0.2 -0.473 51.3 156.0 -71.7 135.8 12.3 -5.0 -1.4 24 403 A F E -A 17 0A 60 -7,-2.1 -7,-3.6 -2,-0.2 2,-0.4 -0.929 42.1 -95.3-150.5 172.0 10.0 -4.8 1.6 25 404 A S E > -A 16 0A 35 -2,-0.3 4,-1.7 -9,-0.2 -9,-0.2 -0.793 21.2-137.6 -98.6 136.9 6.3 -5.2 2.6 26 405 A Y H > S+ 0 0 52 -11,-1.4 4,-1.8 -2,-0.4 5,-0.2 0.876 107.4 52.3 -56.8 -39.3 4.0 -2.1 2.8 27 406 A S H > S+ 0 0 42 -12,-0.3 4,-1.3 1,-0.2 -1,-0.2 0.891 107.3 51.4 -64.7 -40.7 2.5 -3.5 6.0 28 407 A E H > S+ 0 0 81 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.805 106.7 56.1 -66.6 -29.5 5.9 -3.9 7.5 29 408 A V H >< S+ 0 0 0 -4,-1.7 3,-0.7 2,-0.2 7,-0.3 0.933 104.6 49.7 -68.1 -47.7 6.7 -0.3 6.7 30 409 A S H 3< S+ 0 0 80 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.814 109.1 54.5 -61.4 -30.4 3.7 1.1 8.5 31 410 A Q H 3< S+ 0 0 150 -4,-1.3 -1,-0.3 1,-0.3 -2,-0.2 0.771 114.5 42.1 -74.1 -26.9 4.8 -1.0 11.5 32 411 A R XX - 0 0 153 -4,-1.0 3,-1.6 -3,-0.7 4,-0.6 -0.850 62.1-177.4-125.6 94.9 8.2 0.6 11.4 33 412 A P H >> S+ 0 0 90 0, 0.0 4,-1.2 0, 0.0 3,-0.5 0.745 81.4 72.0 -61.3 -23.1 8.2 4.4 10.8 34 413 A E H 3> S+ 0 0 117 1,-0.2 4,-1.1 2,-0.2 5,-0.1 0.803 88.9 61.5 -62.7 -29.1 12.1 4.2 10.8 35 414 A L H <> S+ 0 0 14 -3,-1.6 4,-1.0 -6,-0.3 -1,-0.2 0.875 98.9 55.0 -65.1 -38.5 11.9 2.4 7.5 36 415 A V H << S+ 0 0 36 -4,-0.6 3,-0.4 -3,-0.5 -1,-0.2 0.884 105.3 52.2 -62.6 -39.9 10.2 5.4 5.9 37 416 A A H < S+ 0 0 83 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.2 0.788 108.3 52.0 -67.1 -27.6 13.1 7.7 7.0 38 417 A Q H < S+ 0 0 120 -4,-1.1 2,-0.3 -3,-0.2 -1,-0.2 0.691 90.3 97.2 -80.9 -20.5 15.5 5.3 5.4 39 418 A M S < S- 0 0 10 -4,-1.0 -20,-0.1 -3,-0.4 5,-0.1 -0.535 79.9-119.5 -73.6 131.9 13.7 5.4 2.1 40 419 A T > - 0 0 52 -2,-0.3 4,-2.9 1,-0.1 5,-0.2 -0.101 31.7 -97.4 -63.1 167.4 15.1 7.8 -0.5 41 420 A P H > S+ 0 0 90 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.949 127.1 41.5 -52.4 -56.1 12.9 10.7 -1.8 42 421 A E H > S+ 0 0 132 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.900 116.1 51.1 -59.7 -40.2 11.9 8.9 -5.0 43 422 A E H > S+ 0 0 33 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.847 105.3 56.8 -65.3 -33.8 11.4 5.7 -2.9 44 423 A K H X S+ 0 0 110 -4,-2.9 4,-1.8 1,-0.2 -1,-0.2 0.870 104.5 52.6 -65.2 -36.7 9.3 7.7 -0.5 45 424 A E H X S+ 0 0 134 -4,-1.7 4,-3.9 1,-0.2 5,-0.2 0.924 103.7 55.1 -65.0 -45.5 7.0 8.7 -3.3 46 425 A A H X S+ 0 0 44 -4,-1.8 4,-1.6 1,-0.2 -1,-0.2 0.822 107.3 53.4 -57.3 -30.4 6.5 5.1 -4.4 47 426 A Y H X S+ 0 0 30 -4,-1.2 4,-0.9 2,-0.2 -1,-0.2 0.928 116.0 36.2 -68.9 -48.0 5.4 4.5 -0.8 48 427 A I H X S+ 0 0 81 -4,-1.8 4,-1.5 2,-0.2 -2,-0.2 0.817 112.4 60.5 -75.1 -33.5 2.8 7.2 -0.9 49 428 A A H X S+ 0 0 42 -4,-3.9 4,-1.8 1,-0.2 -2,-0.2 0.906 101.3 53.5 -61.7 -43.0 1.9 6.5 -4.5 50 429 A M H X S+ 0 0 31 -4,-1.6 4,-1.8 -5,-0.2 -1,-0.2 0.869 103.6 58.0 -60.4 -37.8 0.8 2.9 -3.7 51 430 A G H X S+ 0 0 19 -4,-0.9 4,-1.3 1,-0.2 -1,-0.2 0.913 106.1 47.2 -59.7 -44.9 -1.5 4.2 -1.0 52 431 A Q H < S+ 0 0 137 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.876 107.8 56.9 -64.6 -38.6 -3.4 6.4 -3.4 53 432 A R H >< S+ 0 0 177 -4,-1.8 3,-0.9 1,-0.2 -1,-0.2 0.876 108.8 46.1 -60.5 -39.0 -3.7 3.6 -5.9 54 433 A M H 3< S+ 0 0 98 -4,-1.8 3,-0.5 1,-0.2 -1,-0.2 0.762 112.0 51.9 -75.1 -25.9 -5.4 1.4 -3.3 55 434 A F T 3< S+ 0 0 140 -4,-1.3 3,-0.4 1,-0.2 -1,-0.2 -0.036 76.7 106.1 -99.9 29.8 -7.7 4.3 -2.3 56 435 A E S < S+ 0 0 149 -3,-0.9 -1,-0.2 1,-0.3 2,-0.2 0.706 91.1 26.0 -79.9 -21.2 -8.8 4.9 -5.9 57 436 A D S S+ 0 0 142 -3,-0.5 -1,-0.3 -4,-0.1 2,-0.1 -0.617 82.2 117.2-145.1 80.5 -12.2 3.3 -5.1 58 437 A L + 0 0 104 -3,-0.4 2,-0.4 -2,-0.2 -1,-0.0 -0.597 28.5 164.2-148.5 80.6 -13.3 3.5 -1.5 59 438 A F 0 0 201 -2,-0.1 -2,-0.0 1,-0.0 -4,-0.0 -0.859 360.0 360.0-104.1 132.8 -16.4 5.6 -0.9 60 439 A E 0 0 231 -2,-0.4 -1,-0.0 0, 0.0 -2,-0.0 -0.048 360.0 360.0-102.9 360.0 -18.4 5.3 2.4