==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 01-SEP-07 2JUP . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR X.RAMIREZ-ESPAIN,L.RUIZ,P.MARTIN-MALPARTIDA,H.OSCHKINAT, . 46 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3740.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 41.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 13.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 19.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 W G 0 0 142 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 62.4 -9.5 -23.0 -8.0 2 2 W A - 0 0 101 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.998 360.0-140.7-146.0 144.3 -8.3 -19.5 -8.7 3 3 W T - 0 0 93 -2,-0.3 2,-0.4 34,-0.1 32,-0.0 -0.561 18.5-129.3 -99.8 168.1 -6.4 -16.8 -6.7 4 4 W A - 0 0 52 -2,-0.2 2,-0.5 32,-0.0 33,-0.0 -0.938 9.8-161.3-122.8 140.8 -7.0 -13.0 -6.7 5 5 W V - 0 0 101 -2,-0.4 31,-0.1 31,-0.1 3,-0.1 -0.972 18.4-162.5-120.7 116.5 -4.7 -10.1 -7.2 6 6 W S - 0 0 34 -2,-0.5 2,-0.8 1,-0.1 18,-0.1 -0.133 42.1 -65.0 -85.3-177.3 -6.1 -6.8 -6.0 7 7 W E - 0 0 108 16,-0.1 16,-1.0 1,-0.1 2,-0.6 -0.644 56.8-179.0 -74.7 110.1 -5.0 -3.3 -6.7 8 8 W W B +A 22 0A 43 -2,-0.8 2,-0.2 14,-0.2 14,-0.2 -0.866 9.2 168.5-116.4 91.9 -1.5 -3.2 -5.3 9 9 W T - 0 0 52 12,-1.0 2,-0.8 -2,-0.6 12,-0.5 -0.485 38.9-103.6 -96.9 178.2 -0.0 0.3 -5.8 10 10 W E + 0 0 122 10,-0.2 2,-0.4 -2,-0.2 10,-0.2 -0.875 41.8 160.5-108.2 105.3 3.0 1.9 -4.4 11 11 W Y - 0 0 56 8,-3.3 2,-0.5 -2,-0.8 8,-0.3 -0.738 17.1-178.2-123.6 77.7 2.3 4.3 -1.7 12 12 W K - 0 0 99 -2,-0.4 6,-0.2 6,-0.2 31,-0.1 -0.716 12.6-149.4 -88.9 124.0 5.7 4.6 0.0 13 13 W T > - 0 0 21 4,-0.8 3,-1.8 -2,-0.5 4,-0.3 -0.062 38.5 -80.7 -83.8-174.6 5.7 6.9 3.0 14 14 W A T 3 S+ 0 0 113 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.379 117.6 79.8 -72.7 8.0 8.5 9.1 4.5 15 15 W D T 3 S- 0 0 120 2,-0.2 -1,-0.3 0, 0.0 3,-0.1 0.630 107.3-117.2 -85.2 -15.4 9.8 5.9 6.2 16 16 W G S < S+ 0 0 75 -3,-1.8 2,-0.4 1,-0.4 -2,-0.1 0.605 76.3 130.8 80.9 13.3 11.5 4.8 3.0 17 17 W K - 0 0 53 -4,-0.3 2,-1.2 -6,-0.1 -4,-0.8 -0.835 65.3-123.5-101.8 137.8 9.2 1.8 3.2 18 18 W T - 0 0 40 -2,-0.4 2,-0.4 -6,-0.2 -6,-0.2 -0.693 34.8-173.7 -82.6 97.9 7.1 0.6 0.3 19 19 W Y - 0 0 0 -2,-1.2 -8,-3.3 -8,-0.3 2,-0.5 -0.760 12.7-143.1 -93.5 137.2 3.6 0.7 1.7 20 20 W Y E - B 0 29A 32 9,-3.1 9,-3.1 -2,-0.4 2,-0.7 -0.873 5.4-156.0-105.3 135.7 0.9 -0.6 -0.6 21 21 W Y E - B 0 28A 64 -12,-0.5 -12,-1.0 -2,-0.5 2,-0.4 -0.929 17.3-152.0-113.4 112.4 -2.6 0.9 -0.8 22 22 W N E > -AB 8 27A 2 5,-1.6 5,-4.0 -2,-0.7 2,-0.6 -0.648 15.2-155.0 -88.0 129.9 -5.0 -1.7 -1.9 23 23 W N T 5 + 0 0 97 -16,-1.0 -16,-0.1 -2,-0.4 -15,-0.1 -0.396 60.8 116.3 -95.3 53.6 -8.2 -0.8 -3.8 24 24 W R T 5S- 0 0 154 -2,-0.6 -1,-0.1 -17,-0.2 -16,-0.0 0.886 111.7 -29.5 -75.8 -89.7 -9.9 -4.0 -2.6 25 25 W T T 5S- 0 0 112 -3,-0.1 -2,-0.1 0, 0.0 -3,-0.0 -0.020 120.8 -66.9-102.9 24.5 -12.8 -2.6 -0.5 26 26 W L T 5S+ 0 0 103 -4,-0.1 2,-0.3 1,-0.1 -3,-0.2 0.798 84.6 171.5 76.3 97.2 -10.2 0.2 -0.0 27 27 W E E < -B 22 0A 65 -5,-4.0 -5,-1.6 2,-0.0 2,-0.4 -0.899 27.8-139.8-134.4 155.4 -7.5 -1.4 2.0 28 28 W S E -B 21 0A 23 -2,-0.3 2,-0.4 -7,-0.2 -7,-0.2 -0.946 13.8-170.9-118.0 148.6 -4.0 -0.6 3.3 29 29 W T E -B 20 0A 28 -9,-3.1 -9,-3.1 -2,-0.4 -2,-0.0 -0.985 15.0-161.5-140.1 126.4 -1.0 -3.0 3.4 30 30 W W S S+ 0 0 93 -2,-0.4 2,-0.2 -11,-0.2 -1,-0.1 0.956 79.1 15.4 -71.5 -53.3 2.3 -2.3 5.1 31 31 W E S S- 0 0 92 1,-0.2 -11,-0.2 -12,-0.1 3,-0.1 -0.445 115.3 -40.7-109.0-172.1 4.3 -5.0 3.2 32 32 W K S S- 0 0 113 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.1 -0.320 74.7-111.3 -53.9 113.9 3.9 -7.1 0.2 33 33 W P > - 0 0 11 0, 0.0 3,-1.9 0, 0.0 -1,-0.1 -0.003 13.9-119.5 -48.8 151.3 0.2 -8.2 0.2 34 34 W Q T 3 S+ 0 0 179 1,-0.3 -2,-0.1 -3,-0.1 0, 0.0 0.750 121.4 47.5 -64.8 -22.2 -0.7 -11.9 0.9 35 35 W E T 3 S+ 0 0 71 -32,-0.0 2,-1.3 2,-0.0 -1,-0.3 0.193 79.0 122.5-102.4 12.1 -2.3 -11.8 -2.6 36 36 W L < 0 0 62 -3,-1.9 -31,-0.1 -31,-0.1 -4,-0.0 -0.660 360.0 360.0 -75.8 96.2 0.8 -10.1 -4.1 37 37 W K 0 0 163 -2,-1.3 -1,-0.1 -33,-0.0 -34,-0.1 -0.641 360.0 360.0-147.7 360.0 1.5 -12.7 -6.7 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 101 P G 0 0 123 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 168.9 -0.2 18.2 -7.5 40 102 P P - 0 0 119 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.495 360.0-111.4 -77.9 148.4 0.9 14.8 -6.0 41 103 P P - 0 0 90 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.495 25.4-120.1 -78.1 147.1 -1.4 12.9 -3.6 42 104 P L - 0 0 151 -2,-0.2 -29,-0.0 1,-0.1 -31,-0.0 -0.613 31.1-115.5 -79.7 147.3 -0.6 12.5 0.1 43 105 P I - 0 0 66 -2,-0.2 -1,-0.1 -31,-0.1 -31,-0.0 -0.563 19.8-126.0 -79.9 147.1 -0.2 9.0 1.4 44 106 P P - 0 0 38 0, 0.0 -1,-0.0 0, 0.0 -31,-0.0 -0.584 36.0-105.8 -75.0 150.4 -2.6 7.5 3.9 45 107 P P - 0 0 114 0, 0.0 -17,-0.0 0, 0.0 0, 0.0 -0.676 38.8-117.1 -77.0 143.2 -0.8 6.1 6.9 46 108 P P 0 0 21 0, 0.0 -25,-0.1 0, 0.0 -3,-0.0 -0.509 360.0 360.0 -80.4 148.3 -0.8 2.3 6.9 47 109 P P 0 0 129 0, 0.0 -18,-0.1 0, 0.0 0, 0.0 0.923 360.0 360.0 -76.9 360.0 -2.4 0.2 9.6