==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 15-SEP-09 3JUZ . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR RELB; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR D.VU,D.B.HUANG,G.GHOSH . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10123.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 36.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 17.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 278 A T > 0 0 160 0, 0.0 3,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-176.2 47.0 15.6 8.7 2 279 A S T 3 - 0 0 106 1,-0.2 0, 0.0 2,-0.0 0, 0.0 0.598 360.0 -91.9 55.7 5.9 48.9 13.0 10.8 3 280 A E T 3 - 0 0 141 1,-0.2 2,-0.7 26,-0.0 -1,-0.2 0.966 49.4-165.0 52.2 73.2 45.6 11.4 9.9 4 281 A L < + 0 0 121 -3,-0.6 2,-0.4 22,-0.1 -1,-0.2 -0.763 24.5 168.3 -80.2 117.7 43.1 12.2 12.7 5 282 A R - 0 0 146 -2,-0.7 22,-1.8 23,-0.1 2,-0.5 -0.987 29.7-151.8-140.5 130.9 40.4 9.6 12.0 6 283 A I E -A 26 0A 102 -2,-0.4 20,-0.3 20,-0.2 3,-0.1 -0.853 5.6-171.0 -98.4 132.6 37.4 8.5 14.0 7 284 A C E - 0 0 51 18,-4.0 2,-0.3 -2,-0.5 19,-0.2 0.826 62.6 -38.8 -90.2 -37.4 36.3 4.9 13.3 8 285 A R E -A 25 0A 153 17,-1.5 17,-2.3 3,-0.0 2,-0.4 -0.987 40.3-125.6-177.1 170.3 33.1 5.1 15.3 9 286 A I E -A 24 0A 83 -2,-0.3 15,-0.2 15,-0.2 -3,-0.0 -1.000 26.1-133.2-130.9 126.2 31.2 6.3 18.4 10 287 A D S S+ 0 0 64 13,-2.2 2,-0.4 -2,-0.4 14,-0.1 0.827 94.1 41.7 -50.1 -37.3 29.3 3.7 20.4 11 288 A K - 0 0 99 12,-0.3 3,-0.1 1,-0.1 -1,-0.1 -0.927 58.2-168.8-116.2 139.9 26.2 5.9 20.5 12 289 A E S S+ 0 0 201 -2,-0.4 2,-0.3 1,-0.1 -1,-0.1 0.493 76.7 23.6-101.0 -6.6 24.7 7.9 17.6 13 290 A S + 0 0 101 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 -0.978 60.7 154.2-153.4 162.5 22.3 9.8 19.7 14 291 A G - 0 0 44 -2,-0.3 4,-0.0 -3,-0.1 6,-0.0 -0.953 49.3 -51.4-178.8 165.5 21.7 11.0 23.3 15 292 A P > - 0 0 78 0, 0.0 3,-1.9 0, 0.0 5,-0.2 -0.151 40.3-129.6 -54.9 140.5 19.9 13.6 25.4 16 293 A C T 3 S+ 0 0 141 1,-0.3 3,-0.1 3,-0.1 0, 0.0 0.623 102.5 77.3 -64.3 -13.6 20.5 17.3 24.6 17 294 A T T 3 S- 0 0 121 1,-0.2 -1,-0.3 2,-0.0 0, 0.0 0.632 88.7-158.2 -72.8 -12.7 21.3 17.8 28.3 18 295 A G < + 0 0 41 -3,-1.9 -1,-0.2 1,-0.1 3,-0.1 -0.246 57.0 113.3 69.8-157.7 24.8 16.2 27.7 19 296 A G + 0 0 94 1,-0.2 2,-0.5 -3,-0.1 -1,-0.1 0.680 48.6 145.4 63.0 18.8 26.9 14.7 30.4 20 297 A E - 0 0 68 -5,-0.2 2,-0.4 1,-0.0 -1,-0.2 -0.783 50.4-126.2 -93.2 124.7 26.4 11.3 28.7 21 298 A E + 0 0 183 -2,-0.5 2,-0.2 -3,-0.1 -1,-0.0 -0.544 44.1 153.7 -74.1 125.3 29.4 8.9 28.9 22 299 A L - 0 0 56 -2,-0.4 2,-0.3 -12,-0.0 -13,-0.0 -0.756 28.7-143.5-136.2 180.0 30.4 7.6 25.5 23 300 A Y - 0 0 138 -2,-0.2 -13,-2.2 -12,-0.1 2,-0.4 -0.988 6.8-158.1-150.9 149.6 33.5 6.3 23.7 24 301 A L E -A 9 0A 54 -2,-0.3 2,-0.4 -15,-0.2 -15,-0.2 -0.975 12.5-137.2-131.9 145.9 34.9 6.6 20.3 25 302 A L E +A 8 0A 54 -17,-2.3 -18,-4.0 -2,-0.4 -17,-1.5 -0.868 36.6 152.6-101.6 134.4 37.4 4.5 18.3 26 303 A C E -A 6 0A 51 -2,-0.4 -20,-0.2 -20,-0.3 3,-0.1 -0.909 41.7 -91.4-150.8 175.4 40.1 6.2 16.3 27 304 A D S S- 0 0 58 -22,-1.8 -22,-0.1 -2,-0.3 -20,-0.0 -0.289 75.6 -40.1 -84.8 176.9 43.6 5.8 15.0 28 305 A K + 0 0 159 -2,-0.1 2,-0.3 -24,-0.1 -1,-0.2 -0.007 68.1 166.4 -41.0 129.2 46.8 6.9 16.7 29 306 A V - 0 0 33 -3,-0.1 2,-0.7 -25,-0.1 5,-0.1 -0.928 40.7-111.5-140.4 162.8 46.4 10.2 18.6 30 307 A Q > - 0 0 89 3,-0.4 3,-2.6 -2,-0.3 -2,-0.0 -0.901 20.7-150.5-100.6 113.3 48.6 11.9 21.2 31 308 A K T 3 S+ 0 0 106 -2,-0.7 3,-0.4 1,-0.3 -1,-0.1 0.664 97.8 52.4 -57.2 -18.0 46.7 11.9 24.5 32 309 A E T 3 S+ 0 0 110 1,-0.2 -1,-0.3 19,-0.1 19,-0.0 0.386 116.9 39.0 -98.1 1.9 48.4 15.2 25.5 33 310 A D S < S+ 0 0 129 -3,-2.6 -3,-0.4 2,-0.0 2,-0.3 -0.346 97.5 91.4-147.2 57.1 47.4 16.8 22.3 34 311 A I + 0 0 48 -3,-0.4 2,-0.3 -5,-0.1 -5,-0.0 -0.995 38.0 168.9-153.6 146.5 43.9 15.7 21.5 35 312 A S - 0 0 61 -2,-0.3 2,-0.5 13,-0.0 13,-0.1 -0.943 31.0-117.0-150.5 168.3 40.3 16.8 22.2 36 313 A V - 0 0 37 11,-0.4 11,-2.0 -2,-0.3 2,-0.5 -0.961 26.1-160.8-116.6 122.5 36.7 16.0 21.0 37 314 A R E -B 46 0B 151 -2,-0.5 2,-0.4 9,-0.2 9,-0.2 -0.914 8.8-171.3-112.6 124.2 34.7 18.6 19.3 38 315 A F E +B 45 0B 109 7,-3.6 7,-3.0 -2,-0.5 2,-0.3 -0.851 30.8 152.6-101.2 140.1 30.9 18.6 18.9 39 316 A S E -B 44 0B 54 -2,-0.4 2,-0.2 5,-0.2 5,-0.2 -0.998 38.4-163.0-169.3 163.9 29.6 21.3 16.6 40 317 A T E > -B 43 0B 81 3,-2.3 3,-0.7 -2,-0.3 -2,-0.0 -0.720 60.3 -80.5-133.3-179.3 27.3 23.0 14.1 41 318 A A T 3 S+ 0 0 119 -2,-0.2 3,-0.1 1,-0.2 -2,-0.0 0.726 131.9 22.2 -61.6 -19.3 27.9 25.9 11.7 42 319 A S T 3 S+ 0 0 115 1,-0.1 2,-0.3 0, 0.0 -1,-0.2 0.260 117.4 62.0-133.3 11.6 27.4 28.2 14.7 43 320 A W E < -B 40 0B 141 -3,-0.7 -3,-2.3 2,-0.0 2,-0.3 -0.990 52.3-170.0-141.6 150.3 28.0 26.2 17.8 44 321 A E E +B 39 0B 128 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.998 8.3 170.5-142.1 142.3 30.9 24.4 19.4 45 322 A G E -B 38 0B 17 -7,-3.0 -7,-3.6 -2,-0.3 2,-0.4 -0.990 20.2-135.1-148.9 154.7 31.2 22.0 22.3 46 323 A R E -B 37 0B 194 -2,-0.3 -9,-0.2 -9,-0.2 2,-0.2 -0.892 17.7-121.8-119.0 144.5 33.8 19.7 23.8 47 324 A G - 0 0 25 -11,-2.0 2,-0.7 -2,-0.4 -11,-0.4 -0.506 31.5-121.2 -74.9 149.4 33.7 16.2 25.1 48 325 A D + 0 0 168 -2,-0.2 2,-0.3 -13,-0.1 -1,-0.1 -0.836 57.2 119.7 -98.6 111.3 34.8 15.8 28.8 49 326 A F - 0 0 63 -2,-0.7 2,-0.2 -13,-0.0 -13,-0.1 -0.986 42.5-140.1-161.6 162.8 37.7 13.4 29.2 50 327 A S > - 0 0 59 -2,-0.3 3,-1.1 1,-0.0 4,-0.0 -0.576 41.3 -93.0-118.4-177.1 41.3 13.2 30.5 51 328 A Q G > S+ 0 0 101 1,-0.3 3,-2.4 -2,-0.2 -20,-0.1 0.890 124.3 63.2 -65.1 -36.9 44.5 11.5 29.4 52 329 A A G 3 S+ 0 0 78 1,-0.3 -1,-0.3 3,-0.0 -21,-0.0 0.706 96.7 61.2 -59.0 -19.5 43.6 8.6 31.6 53 330 A D G < S+ 0 0 92 -3,-1.1 2,-0.8 -22,-0.1 -1,-0.3 0.370 81.4 90.0 -91.1 4.1 40.5 8.2 29.4 54 331 A V < - 0 0 48 -3,-2.4 2,-0.4 -4,-0.0 -23,-0.1 -0.890 63.4-171.1-104.5 107.2 42.5 7.6 26.2 55 332 A H - 0 0 124 -2,-0.8 2,-0.7 0, 0.0 -2,-0.0 -0.824 24.7-136.4-106.3 136.8 43.0 3.8 26.0 56 333 A R + 0 0 246 -2,-0.4 2,-0.3 -28,-0.0 -2,-0.0 -0.798 44.4 166.0 -87.1 116.1 45.2 1.8 23.6 57 334 A Q - 0 0 147 -2,-0.7 2,-0.4 2,-0.0 0, 0.0 -0.817 37.5-127.3-130.6 170.8 43.0 -1.1 22.6 58 335 A I - 0 0 150 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.945 21.3-159.9-117.8 138.5 42.7 -3.9 20.1 59 336 A A - 0 0 76 -2,-0.4 2,-0.5 2,-0.0 -2,-0.0 -0.983 0.8-160.0-121.8 128.9 39.5 -4.3 18.1 60 337 A I - 0 0 108 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.951 3.5-156.6-113.8 124.5 38.5 -7.6 16.5 61 338 A V + 0 0 143 -2,-0.5 2,-0.3 2,-0.0 -2,-0.0 -0.823 31.1 148.9 -95.4 133.4 35.9 -7.6 13.6 62 339 A F - 0 0 136 -2,-0.4 2,-0.4 0, 0.0 -2,-0.0 -0.992 45.1-115.4-163.0 157.2 34.2 -10.9 13.2 63 340 A K - 0 0 203 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.806 39.4-114.3 -98.2 139.1 31.0 -12.6 12.1 64 341 A T - 0 0 77 -2,-0.4 -1,-0.1 1,-0.1 3,-0.0 -0.333 28.0-116.1 -70.2 151.0 29.1 -14.6 14.7 65 342 A P - 0 0 80 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.587 36.5-100.8 -84.8 152.0 28.8 -18.3 14.4 66 343 A P - 0 0 110 0, 0.0 2,-0.1 0, 0.0 4,-0.1 -0.484 43.1-110.2 -70.1 146.7 25.3 -19.7 13.9 67 344 A Y - 0 0 64 2,-0.1 3,-0.0 -2,-0.1 -3,-0.0 -0.432 23.2-112.6 -76.1 154.0 23.8 -21.1 17.0 68 345 A E S S+ 0 0 179 1,-0.2 2,-0.7 -2,-0.1 -1,-0.1 0.837 107.5 47.9 -50.8 -42.7 23.3 -24.9 17.4 69 346 A D > + 0 0 72 1,-0.1 3,-0.8 2,-0.0 -1,-0.2 -0.903 57.3 177.6-111.5 107.6 19.5 -24.5 17.4 70 347 A L T 3 S+ 0 0 93 -2,-0.7 31,-0.4 1,-0.2 -1,-0.1 0.387 81.0 63.2 -84.7 2.2 18.1 -22.3 14.7 71 348 A E T 3 + 0 0 138 29,-0.1 -1,-0.2 30,-0.1 2,-0.0 0.118 67.8 138.5-113.0 19.3 14.6 -23.1 15.9 72 349 A I < - 0 0 26 -3,-0.8 29,-0.4 1,-0.2 4,-0.1 -0.399 33.9-168.5 -64.8 142.7 14.9 -21.6 19.4 73 350 A S S S+ 0 0 96 27,-0.1 -1,-0.2 2,-0.1 -3,-0.0 0.528 72.2 53.5-106.7 -14.1 11.7 -19.7 20.3 74 351 A E S S- 0 0 138 25,-0.1 24,-0.1 1,-0.1 -1,-0.1 -0.911 98.4 -93.5-122.5 148.1 13.2 -18.1 23.3 75 352 A P - 0 0 72 0, 0.0 2,-0.4 0, 0.0 24,-0.2 -0.200 34.3-158.1 -57.3 151.1 16.4 -16.0 23.5 76 353 A V E -C 98 0C 39 22,-2.1 22,-3.1 -4,-0.1 2,-0.8 -0.914 0.9-159.3-136.8 105.6 19.6 -17.9 24.5 77 354 A T E +C 97 0C 87 -2,-0.4 20,-0.3 20,-0.3 2,-0.1 -0.788 19.4 178.5 -91.3 113.4 22.4 -15.9 26.0 78 355 A V E -C 96 0C 41 18,-2.4 18,-1.6 -2,-0.8 2,-0.3 -0.289 30.5 -90.8 -98.2-172.9 25.7 -17.8 25.6 79 356 A N E -C 95 0C 105 16,-0.2 2,-0.4 -2,-0.1 -1,-0.1 -0.749 30.0-165.1-102.7 150.9 29.2 -16.9 26.5 80 357 A V E +C 94 0C 62 14,-1.9 14,-2.7 -2,-0.3 2,-0.3 -0.999 21.4 154.0-134.6 131.3 31.8 -15.2 24.3 81 358 A Q - 0 0 92 -2,-0.4 2,-0.3 12,-0.2 11,-0.1 -0.989 43.7-100.7-155.3 162.5 35.4 -15.1 25.2 82 359 A L - 0 0 112 10,-0.4 9,-1.8 -2,-0.3 2,-0.4 -0.637 37.3-171.5 -82.8 142.8 38.9 -14.8 23.8 83 360 A Q B -D 90 0D 122 -2,-0.3 2,-0.3 7,-0.2 7,-0.2 -0.995 19.5-133.6-140.3 133.0 40.9 -18.0 23.4 84 361 A R > - 0 0 128 5,-2.3 4,-0.9 -2,-0.4 5,-0.0 -0.648 10.3-147.3 -82.2 137.9 44.5 -18.6 22.6 85 362 A L T 4 S+ 0 0 167 -2,-0.3 -1,-0.1 2,-0.2 0, 0.0 0.925 92.7 51.8 -71.3 -44.2 45.1 -21.2 19.9 86 363 A T T 4 S+ 0 0 130 1,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 0.960 130.2 11.0 -58.0 -61.5 48.4 -22.4 21.4 87 364 A D T 4 S- 0 0 87 2,-0.1 -1,-0.2 0, 0.0 -2,-0.2 0.511 93.1-126.6 -99.4 -6.5 47.5 -23.1 25.0 88 365 A G < + 0 0 35 -4,-0.9 2,-0.4 1,-0.2 -3,-0.1 0.818 49.7 164.2 65.3 29.4 43.7 -22.8 24.7 89 366 A E - 0 0 116 1,-0.0 -5,-2.3 -5,-0.0 -1,-0.2 -0.659 21.4-152.3 -81.8 133.5 43.7 -20.2 27.5 90 367 A C B -D 83 0D 58 -2,-0.4 -7,-0.2 -7,-0.2 2,-0.2 -0.638 7.3-132.4-106.3 163.6 40.4 -18.3 27.7 91 368 A S - 0 0 49 -9,-1.8 -1,-0.1 -2,-0.2 -7,-0.0 -0.452 50.1 -71.8 -98.7 177.0 39.5 -14.8 29.0 92 369 A E - 0 0 162 -2,-0.2 -10,-0.4 1,-0.1 2,-0.3 -0.339 63.4-103.9 -64.1 155.1 36.5 -14.2 31.3 93 370 A P - 0 0 50 0, 0.0 -12,-0.2 0, 0.0 -1,-0.1 -0.624 28.2-161.4 -90.1 147.0 33.2 -14.6 29.5 94 371 A L E -C 80 0C 118 -14,-2.7 -14,-1.9 -2,-0.3 2,-0.2 -0.928 27.7-112.8-117.3 144.2 31.0 -11.8 28.2 95 372 A P E +C 79 0C 99 0, 0.0 2,-0.3 0, 0.0 -16,-0.2 -0.488 32.6 174.1 -82.6 150.5 27.3 -12.6 27.4 96 373 A F E -C 78 0C 89 -18,-1.6 -18,-2.4 -2,-0.2 2,-0.5 -0.930 20.0-146.0-149.6 125.1 25.8 -12.4 23.9 97 374 A T E -C 77 0C 59 -2,-0.3 -20,-0.3 -20,-0.3 2,-0.3 -0.871 4.9-142.2-108.8 126.4 22.2 -13.6 23.4 98 375 A Y E -C 76 0C 38 -22,-3.1 -22,-2.1 -2,-0.5 -2,-0.0 -0.603 17.1-147.0 -78.9 137.9 21.0 -15.3 20.3 99 376 A L - 0 0 123 -2,-0.3 -27,-0.1 -24,-0.2 -25,-0.1 -0.828 18.5-109.3-108.8 145.4 17.5 -14.3 19.1 100 377 A P 0 0 41 0, 0.0 -27,-0.1 0, 0.0 -29,-0.1 -0.172 360.0 360.0 -64.6 164.4 15.0 -16.7 17.4 101 378 A R 0 0 212 -31,-0.4 -30,-0.1 -29,-0.4 -28,-0.1 0.992 360.0 360.0 -66.0 360.0 14.2 -16.1 13.7