==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 17-SEP-07 2JVC . COMPND 2 MOLECULE: UBIQUITIN_LIKE PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.B.TRAN,Y.LIU,L.C.HEW . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5658.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 64.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 18.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 13.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 118 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-166.0 2.1 0.0 -1.2 2 2 A P + 0 0 130 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.086 360.0 174.0 -69.7 173.5 1.6 1.8 -4.6 3 3 A L - 0 0 164 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.968 19.0-166.3-173.6 162.5 -1.8 2.5 -6.2 4 4 A G + 0 0 32 -2,-0.3 2,-0.3 19,-0.0 21,-0.1 -0.649 29.3 128.9-166.7 103.7 -3.5 4.2 -9.1 5 5 A S + 0 0 67 -2,-0.2 2,-0.3 18,-0.1 18,-0.2 -0.917 15.1 166.4-161.0 130.3 -7.2 4.9 -9.6 6 6 A M E -A 22 0A 23 16,-3.3 16,-2.3 -2,-0.3 62,-0.2 -0.958 19.5-147.5-150.6 128.0 -9.3 7.9 -10.4 7 7 A Q E -A 21 0A 67 61,-0.8 63,-0.4 -2,-0.3 2,-0.3 -0.557 12.8-150.5 -93.0 159.0 -13.0 8.3 -11.5 8 8 A I E -A 20 0A 21 12,-2.6 12,-1.8 61,-0.2 2,-0.5 -0.910 10.2-128.5-129.1 156.6 -14.4 11.0 -13.8 9 9 A F E -Ab 19 71A 67 61,-2.7 63,-1.9 -2,-0.3 2,-0.5 -0.914 21.1-167.6-109.4 125.0 -17.7 12.7 -14.2 10 10 A V E -Ab 18 72A 7 8,-2.4 8,-2.1 -2,-0.5 2,-0.6 -0.936 7.1-155.4-114.9 131.3 -19.4 12.9 -17.6 11 11 A K E -Ab 17 73A 88 61,-1.6 63,-2.9 -2,-0.5 6,-0.2 -0.909 13.5-147.1-108.8 114.3 -22.4 15.1 -18.4 12 12 A T > - 0 0 2 4,-1.8 3,-2.6 -2,-0.6 4,-0.4 -0.297 30.4-105.9 -74.1 161.0 -24.6 13.9 -21.2 13 13 A L T 3 S+ 0 0 113 1,-0.3 -1,-0.1 2,-0.2 62,-0.1 0.712 123.2 60.3 -59.1 -19.2 -26.5 16.4 -23.5 14 14 A T T 3 S- 0 0 119 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.297 125.6-102.2 -91.3 8.8 -29.6 15.4 -21.6 15 15 A G < + 0 0 62 -3,-2.6 2,-0.5 1,-0.2 -2,-0.2 0.978 68.1 153.2 70.0 57.6 -28.1 16.6 -18.4 16 16 A K - 0 0 85 -4,-0.4 -4,-1.8 2,-0.0 2,-0.6 -0.972 34.9-147.8-124.7 120.8 -27.0 13.3 -16.9 17 17 A T E +A 11 0A 106 -2,-0.5 2,-0.4 -6,-0.2 -6,-0.2 -0.764 22.5 178.7 -89.8 118.8 -24.2 13.0 -14.4 18 18 A I E -A 10 0A 13 -8,-2.1 -8,-2.4 -2,-0.6 2,-0.4 -0.943 15.9-149.6-122.8 142.9 -22.3 9.7 -14.6 19 19 A T E +A 9 0A 79 -2,-0.4 2,-0.4 -10,-0.2 -10,-0.2 -0.919 17.1 174.3-114.0 135.4 -19.3 8.4 -12.7 20 20 A I E -A 8 0A 4 -12,-1.8 -12,-2.6 -2,-0.4 2,-0.4 -0.994 27.9-127.1-142.7 133.3 -16.7 6.0 -14.0 21 21 A D E +A 7 0A 118 -2,-0.4 -14,-0.3 -14,-0.3 2,-0.3 -0.629 38.8 163.7 -80.8 130.7 -13.4 4.7 -12.5 22 22 A V E -A 6 0A 6 -16,-2.3 -16,-3.3 -2,-0.4 2,-0.3 -0.926 28.9-127.8-142.2 165.9 -10.3 5.2 -14.7 23 23 A D > - 0 0 58 -2,-0.3 3,-2.6 -18,-0.2 38,-0.1 -0.881 25.3-120.1-118.7 150.3 -6.6 5.1 -14.5 24 24 A H T 3 S+ 0 0 122 -2,-0.3 40,-0.1 1,-0.3 36,-0.1 0.686 114.5 66.0 -58.7 -16.7 -4.0 7.7 -15.7 25 25 A A T 3 S+ 0 0 79 -21,-0.1 -1,-0.3 36,-0.1 2,-0.1 0.332 93.6 80.2 -87.2 6.9 -2.7 4.8 -17.9 26 26 A D < - 0 0 50 -3,-2.6 36,-0.4 3,-0.0 2,-0.3 -0.216 69.6-135.7 -99.3-168.2 -5.9 4.9 -19.8 27 27 A T > - 0 0 57 34,-0.1 4,-1.9 1,-0.1 31,-0.2 -0.940 27.3-102.4-147.2 167.3 -7.2 7.1 -22.6 28 28 A V H > S+ 0 0 7 29,-1.6 4,-2.8 -2,-0.3 5,-0.2 0.931 117.7 56.6 -57.5 -48.8 -10.3 9.0 -23.8 29 29 A G H > S+ 0 0 32 28,-1.5 4,-1.6 1,-0.2 -1,-0.2 0.914 108.1 46.8 -49.7 -50.2 -11.2 6.3 -26.3 30 30 A A H > S+ 0 0 52 27,-0.3 4,-1.6 1,-0.2 -1,-0.2 0.890 111.9 51.6 -60.6 -40.9 -11.3 3.6 -23.7 31 31 A V H X S+ 0 0 19 -4,-1.9 4,-2.1 1,-0.2 5,-0.2 0.908 104.5 56.4 -63.1 -43.4 -13.4 5.9 -21.4 32 32 A K H X S+ 0 0 24 -4,-2.8 4,-1.9 1,-0.2 -1,-0.2 0.890 106.4 50.8 -55.9 -41.8 -15.9 6.5 -24.2 33 33 A A H X S+ 0 0 46 -4,-1.6 4,-1.7 -5,-0.2 -1,-0.2 0.892 106.9 54.1 -64.0 -40.8 -16.5 2.8 -24.5 34 34 A K H X S+ 0 0 96 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.916 109.9 46.6 -60.1 -45.0 -17.0 2.4 -20.8 35 35 A I H X>S+ 0 0 1 -4,-2.1 4,-1.8 1,-0.2 5,-0.6 0.861 105.5 61.2 -65.9 -36.5 -19.7 5.1 -20.8 36 36 A Y H X>S+ 0 0 100 -4,-1.9 4,-0.7 1,-0.2 5,-0.6 0.913 110.8 38.8 -56.7 -45.4 -21.4 3.5 -23.9 37 37 A D H <5S+ 0 0 113 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.807 106.0 68.4 -75.2 -30.8 -22.0 0.3 -22.0 38 38 A K H <5S- 0 0 111 -4,-1.7 -2,-0.2 -5,-0.2 -1,-0.2 0.913 131.0 -5.2 -54.2 -46.4 -22.9 2.2 -18.8 39 39 A E H <5S- 0 0 70 -4,-1.8 -3,-0.2 2,-0.1 -2,-0.2 0.738 102.8-102.4-114.6 -53.8 -26.1 3.5 -20.4 40 40 A G T << + 0 0 21 -4,-0.7 -3,-0.2 -5,-0.6 -4,-0.2 0.652 63.4 141.5 126.3 48.5 -26.1 2.4 -24.0 41 41 A I < - 0 0 14 -5,-0.6 -1,-0.2 -6,-0.2 -2,-0.1 -0.859 57.3 -96.5-118.3 152.7 -25.1 5.3 -26.3 42 42 A P >> - 0 0 19 0, 0.0 4,-0.8 0, 0.0 3,-0.6 -0.515 25.8-162.8 -69.7 116.8 -22.9 5.5 -29.5 43 43 A P T 34 S+ 0 0 48 0, 0.0 -10,-0.1 0, 0.0 -11,-0.0 0.780 91.4 55.8 -69.8 -27.8 -19.4 6.5 -28.6 44 44 A D T 34 S+ 0 0 143 1,-0.2 -12,-0.0 3,-0.0 -3,-0.0 0.646 110.4 45.6 -78.9 -15.7 -18.6 7.3 -32.2 45 45 A Q T <4 S+ 0 0 95 -3,-0.6 32,-1.7 2,-0.0 2,-0.3 0.546 105.3 74.2-101.3 -12.3 -21.6 9.7 -32.2 46 46 A Q E < -C 76 0A 2 -4,-0.8 2,-0.3 30,-0.2 30,-0.2 -0.728 60.6-170.7-103.4 153.0 -20.7 11.3 -28.8 47 47 A R E -C 75 0A 104 28,-2.0 28,-2.1 -2,-0.3 2,-0.3 -0.951 18.1-123.4-140.1 158.8 -17.9 13.8 -28.1 48 48 A L E -C 74 0A 6 7,-0.4 7,-1.5 -2,-0.3 2,-0.4 -0.802 21.8-170.9-105.6 146.3 -16.2 15.4 -25.1 49 49 A I E -CD 73 54A 33 24,-3.0 24,-1.9 -2,-0.3 2,-0.5 -0.995 6.9-173.4-140.0 131.6 -15.9 19.1 -24.4 50 50 A F E > S- D 0 53A 79 3,-3.3 3,-1.4 -2,-0.4 22,-0.1 -0.938 78.9 -22.7-128.6 110.0 -13.9 20.9 -21.7 51 51 A G T 3 S- 0 0 90 -2,-0.5 3,-0.1 1,-0.3 -1,-0.1 0.472 129.4 -50.1 72.7 -0.4 -14.3 24.7 -21.3 52 52 A G T 3 S+ 0 0 63 1,-0.5 2,-0.3 21,-0.1 -1,-0.3 0.023 118.3 100.7 126.4 -27.1 -15.5 24.8 -24.9 53 53 A K E < S-D 50 0A 108 -3,-1.4 -3,-3.3 1,-0.1 -1,-0.5 -0.676 71.9-116.2 -93.0 146.0 -12.7 22.8 -26.7 54 54 A Q E -D 49 0A 114 -2,-0.3 2,-0.5 -5,-0.2 -5,-0.3 -0.362 23.9-123.4 -76.9 158.5 -13.2 19.1 -27.6 55 55 A L - 0 0 25 -7,-1.5 -7,-0.4 -2,-0.1 -1,-0.1 -0.912 20.6-138.2-109.0 125.8 -11.0 16.4 -26.1 56 56 A E - 0 0 145 -2,-0.5 3,-0.2 1,-0.1 -28,-0.1 0.103 37.2 -90.3 -65.4-174.1 -9.0 14.1 -28.4 57 57 A D S S+ 0 0 118 1,-0.2 -29,-1.6 -29,-0.1 -28,-1.5 0.748 132.2 34.3 -72.5 -24.1 -8.7 10.3 -27.9 58 58 A S S >S+ 0 0 59 -31,-0.2 2,-1.7 -30,-0.2 5,-0.7 0.317 89.6 108.4-110.7 3.9 -5.6 10.9 -25.7 59 59 A N T 5S+ 0 0 24 -3,-0.2 -1,-0.1 3,-0.1 -32,-0.1 -0.587 75.4 43.3 -85.0 79.8 -6.9 14.1 -24.2 60 60 A A T >S+ 0 0 20 -2,-1.7 5,-1.7 -34,-0.1 6,-0.5 -0.161 116.2 21.1-173.2 -80.9 -7.6 12.9 -20.7 61 61 A M T > 5S+ 0 0 4 2,-0.2 3,-1.8 3,-0.2 5,-0.3 0.977 129.5 40.9 -73.8 -59.9 -5.3 10.6 -18.8 62 62 A S T 3 5S+ 0 0 59 -36,-0.4 -1,-0.1 1,-0.3 -3,-0.1 0.833 106.8 66.3 -58.0 -33.2 -2.0 11.3 -20.8 63 63 A D T 3