==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-SEP-07 2JVM . COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES 2.4.1; . AUTHOR A.ELETSKY,D.SUKUMARAN,Q.ZHANG,D.PARISH,D.XU,H.WANG,H.JANJUA, . 80 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7625.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 47.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 11.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 22.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 196 0, 0.0 2,-1.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 12.9 -28.2 21.8 -53.9 2 2 A R - 0 0 232 3,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.688 360.0-177.6 -85.6 103.5 -26.3 24.0 -51.5 3 3 A R - 0 0 217 -2,-1.0 3,-0.0 1,-0.0 0, 0.0 -0.695 36.4 -98.1-101.0 154.5 -27.6 23.2 -48.0 4 4 A Q - 0 0 189 -2,-0.3 -1,-0.0 1,-0.1 -2,-0.0 -0.612 47.7-116.5 -74.1 115.9 -26.5 24.9 -44.8 5 5 A P - 0 0 117 0, 0.0 2,-0.8 0, 0.0 -1,-0.1 -0.241 17.6-136.0 -58.6 131.7 -23.9 22.5 -43.1 6 6 A K - 0 0 171 2,-0.1 2,-1.3 1,-0.0 -3,-0.0 -0.824 14.4-150.5 -90.9 111.7 -24.9 21.0 -39.8 7 7 A T + 0 0 116 -2,-0.8 2,-0.9 2,-0.0 3,-0.0 -0.685 19.0 177.7 -89.3 91.9 -21.9 21.3 -37.5 8 8 A R + 0 0 184 -2,-1.3 -2,-0.1 1,-0.1 -1,-0.0 -0.827 11.4 167.2 -97.1 99.5 -22.2 18.3 -35.1 9 9 A Q + 0 0 169 -2,-0.9 2,-0.8 2,-0.0 -1,-0.1 0.301 38.6 122.3 -92.6 7.5 -19.1 18.4 -32.9 10 10 A E + 0 0 159 2,-0.0 2,-0.5 1,-0.0 -2,-0.1 -0.623 31.2 165.8 -76.0 107.6 -20.7 15.9 -30.6 11 11 A S - 0 0 114 -2,-0.8 2,-0.5 2,-0.1 -2,-0.0 -0.883 14.1-168.6-127.9 99.4 -18.4 12.9 -30.4 12 12 A A + 0 0 107 -2,-0.5 2,-0.3 2,-0.0 -2,-0.0 -0.761 15.5 158.8 -94.9 130.0 -19.3 10.5 -27.6 13 13 A R - 0 0 223 -2,-0.5 2,-0.7 2,-0.0 -2,-0.1 -0.923 24.7-155.3-151.4 123.0 -16.9 7.7 -26.6 14 14 A M - 0 0 159 -2,-0.3 2,-0.9 1,-0.1 3,-0.1 -0.877 2.1-167.8-103.3 110.5 -16.7 5.9 -23.3 15 15 A S - 0 0 75 -2,-0.7 64,-0.1 1,-0.3 63,-0.1 -0.308 60.8 -80.5 -91.0 50.9 -13.3 4.4 -22.6 16 16 A I - 0 0 104 -2,-0.9 -1,-0.3 1,-0.1 63,-0.1 0.255 34.3-133.8 64.1 164.5 -14.6 2.3 -19.7 17 17 A E S S+ 0 0 164 1,-0.2 -1,-0.1 -3,-0.1 -2,-0.0 0.098 78.0 74.1-140.3 21.9 -15.3 3.6 -16.2 18 18 A A + 0 0 74 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.744 46.6 164.3-149.6 89.4 -13.8 1.0 -14.0 19 19 A P - 0 0 45 0, 0.0 2,-1.3 0, 0.0 60,-0.1 -0.789 53.4 -97.0 -96.4 150.7 -10.0 0.6 -13.5 20 20 A E S S+ 0 0 93 -2,-0.3 42,-2.4 40,-0.1 2,-0.4 -0.540 70.5 146.6 -70.1 96.2 -8.6 -1.4 -10.6 21 21 A T E -a 62 0A 38 -2,-1.3 2,-0.5 40,-0.2 42,-0.2 -0.992 38.7-150.5-138.5 139.7 -7.9 1.5 -8.2 22 22 A V E -a 63 0A 48 40,-2.1 42,-2.2 -2,-0.4 2,-0.5 -0.949 15.7-137.4-113.4 131.1 -8.0 2.0 -4.5 23 23 A V E -a 64 0A 87 -2,-0.5 2,-0.3 40,-0.2 42,-0.2 -0.768 28.4-171.4 -87.0 123.9 -8.8 5.3 -2.9 24 24 A V E -a 65 0A 16 40,-2.8 42,-2.3 -2,-0.5 5,-0.1 -0.832 32.6-158.5-119.6 153.7 -6.5 6.0 0.1 25 25 A S S S+ 0 0 78 -2,-0.3 2,-0.4 40,-0.2 40,-0.1 0.407 82.4 71.3-102.6 -3.8 -6.4 8.7 2.8 26 26 A T - 0 0 86 1,-0.1 21,-0.0 40,-0.0 -1,-0.0 -0.953 68.3-150.5-119.4 131.0 -2.7 8.0 3.3 27 27 A W S S+ 0 0 77 -2,-0.4 20,-3.0 1,-0.1 2,-0.7 0.790 94.0 62.9 -66.8 -29.3 0.1 8.9 0.9 28 28 A K E S-C 46 0B 136 18,-0.2 2,-0.3 -3,-0.1 18,-0.2 -0.891 78.1-175.6 -97.1 113.9 2.0 5.9 2.3 29 29 A V E -C 45 0B 20 16,-1.8 16,-2.8 -2,-0.7 2,-0.8 -0.821 25.3-135.1-113.2 150.9 0.0 2.8 1.5 30 30 A A E -C 44 0B 45 -2,-0.3 14,-0.2 14,-0.2 2,-0.2 -0.887 27.4-164.7-105.7 104.7 0.6 -0.8 2.4 31 31 A C E +C 43 0B 1 12,-2.7 12,-2.4 -2,-0.8 2,-0.1 -0.574 16.4 168.0 -92.6 155.8 0.1 -3.0 -0.7 32 32 A D - 0 0 104 10,-0.2 2,-0.2 -2,-0.2 10,-0.2 -0.568 54.9 -33.9-171.4 84.1 -0.3 -6.8 -0.6 33 33 A G - 0 0 12 7,-0.4 2,-0.3 8,-0.3 6,-0.2 -0.612 56.7-149.7 104.0-153.6 -1.5 -8.7 -3.6 34 34 A G - 0 0 32 4,-0.3 2,-0.2 -2,-0.2 5,-0.1 -0.887 31.4 -46.0 177.7-144.1 -3.9 -7.7 -6.4 35 35 A E S > S+ 0 0 118 -2,-0.3 3,-2.3 -15,-0.1 2,-0.2 -0.667 96.0 5.7-115.8 170.0 -6.4 -9.1 -8.8 36 36 A G T 3 S- 0 0 65 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 -0.405 131.8 -29.6 60.0-125.5 -6.3 -12.1 -11.2 37 37 A A T 3 S+ 0 0 106 -2,-0.2 2,-0.6 -4,-0.1 -1,-0.3 0.214 107.5 119.0-106.0 11.7 -3.1 -14.1 -10.6 38 38 A L < + 0 0 73 -3,-2.3 -4,-0.3 2,-0.0 2,-0.3 -0.694 35.0 150.4 -83.4 120.6 -1.2 -11.0 -9.5 39 39 A G + 0 0 59 -2,-0.6 -2,-0.0 -6,-0.2 -4,-0.0 -0.992 13.6 164.5-153.3 145.1 0.0 -11.3 -5.9 40 40 A H - 0 0 20 -2,-0.3 -7,-0.4 3,-0.0 3,-0.1 -0.980 38.3 -91.4-155.5 157.3 2.9 -10.0 -3.9 41 41 A P - 0 0 104 0, 0.0 -8,-0.3 0, 0.0 2,-0.2 -0.101 64.7 -64.6 -66.6 171.1 4.0 -9.6 -0.2 42 42 A R + 0 0 183 -10,-0.2 2,-0.3 -12,-0.1 -10,-0.2 -0.397 62.6 171.8 -63.1 121.5 3.3 -6.5 1.9 43 43 A V E -C 31 0B 50 -12,-2.4 -12,-2.7 -2,-0.2 2,-0.6 -0.945 29.6-129.0-129.0 154.0 5.2 -3.5 0.6 44 44 A W E -C 30 0B 168 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.911 28.0-173.7-106.8 119.6 5.0 0.2 1.5 45 45 A L E -C 29 0B 41 -16,-2.8 -16,-1.8 -2,-0.6 2,-0.5 -0.752 15.8-140.6-110.7 159.2 4.6 2.6 -1.3 46 46 A S E -C 28 0B 70 -2,-0.3 -18,-0.2 -18,-0.2 -19,-0.1 -0.978 12.5-139.9-124.1 121.0 4.6 6.4 -1.4 47 47 A I - 0 0 0 -20,-3.0 2,-0.3 -2,-0.5 7,-0.1 -0.684 25.6-119.1 -80.9 121.7 2.2 8.4 -3.5 48 48 A P >> - 0 0 44 0, 0.0 4,-2.8 0, 0.0 3,-1.4 -0.453 17.1-149.0 -60.8 124.5 3.9 11.4 -5.2 49 49 A H T 34 S+ 0 0 112 1,-0.3 -2,-0.0 -2,-0.3 16,-0.0 0.785 97.4 48.1 -72.2 -28.2 2.1 14.5 -3.9 50 50 A E T 34 S+ 0 0 164 1,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.328 115.9 45.8 -92.9 5.7 2.6 16.4 -7.1 51 51 A T T <4 S- 0 0 70 -3,-1.4 -2,-0.2 -4,-0.0 -1,-0.1 0.691 92.0-143.7-115.4 -39.1 1.5 13.5 -9.2 52 52 A G < + 0 0 0 -4,-2.8 13,-1.6 12,-0.0 2,-0.3 -0.118 69.0 31.9 105.4 -37.2 -1.7 12.4 -7.3 53 53 A F E -B 64 0A 48 11,-0.2 2,-0.3 -5,-0.1 11,-0.2 -0.943 60.2-150.6-148.0 166.3 -1.5 8.7 -7.7 54 54 A V E -B 63 0A 28 9,-2.7 9,-3.0 -2,-0.3 2,-0.3 -0.996 12.1-137.5-143.3 143.9 1.0 5.8 -8.0 55 55 A E E -B 62 0A 114 -2,-0.3 2,-0.2 7,-0.2 7,-0.2 -0.758 29.8-107.6 -99.3 149.3 0.9 2.4 -9.6 56 56 A C - 0 0 13 5,-1.3 -1,-0.0 3,-0.4 -11,-0.0 -0.559 17.3-141.0 -74.6 137.9 2.2 -0.8 -8.0 57 57 A G S S+ 0 0 79 -2,-0.2 -1,-0.1 1,-0.1 3,-0.1 0.630 100.7 30.4 -74.6 -13.6 5.5 -2.1 -9.5 58 58 A Y S S+ 0 0 166 1,-0.2 2,-0.2 3,-0.1 -1,-0.1 0.801 120.9 40.0-104.9 -61.0 4.2 -5.6 -9.2 59 59 A C S S- 0 0 4 -26,-0.2 -3,-0.4 2,-0.1 -1,-0.2 -0.595 76.3-124.5 -97.4 155.3 0.4 -5.6 -9.6 60 60 A D S S+ 0 0 136 -2,-0.2 2,-0.4 -25,-0.2 -40,-0.1 0.331 72.9 117.4 -82.3 8.1 -1.6 -3.5 -12.0 61 61 A R - 0 0 71 -26,-0.1 -5,-1.3 -42,-0.1 2,-0.3 -0.645 54.1-150.3 -80.3 129.9 -3.7 -2.0 -9.2 62 62 A R E -aB 21 55A 47 -42,-2.4 -40,-2.1 -2,-0.4 2,-0.4 -0.775 2.9-150.1-103.6 143.7 -3.3 1.8 -8.9 63 63 A Y E +aB 22 54A 20 -9,-3.0 -9,-2.7 -2,-0.3 2,-0.3 -0.938 15.9 178.9-117.6 135.9 -3.6 3.8 -5.7 64 64 A I E -aB 23 53A 3 -42,-2.2 -40,-2.8 -2,-0.4 -11,-0.2 -0.986 30.9-111.0-137.4 144.4 -4.8 7.4 -5.5 65 65 A H E >> -a 24 0A 25 -13,-1.6 4,-1.3 -2,-0.3 3,-1.2 -0.502 31.5-119.0 -73.1 144.3 -5.4 9.8 -2.7 66 66 A E H 3> S+ 0 0 94 -42,-2.3 4,-2.6 1,-0.3 -1,-0.1 0.801 111.9 59.1 -53.8 -33.5 -9.0 10.8 -2.0 67 67 A S H 34 S+ 0 0 91 1,-0.2 -1,-0.3 2,-0.2 -42,-0.1 0.853 110.6 40.7 -67.8 -33.4 -8.3 14.4 -2.8 68 68 A F H <4 S+ 0 0 82 -3,-1.2 -1,-0.2 -16,-0.2 3,-0.2 0.634 117.0 51.0 -88.2 -15.0 -7.1 13.6 -6.3 69 69 A A H < S+ 0 0 36 -4,-1.3 -2,-0.2 1,-0.2 -3,-0.2 0.841 103.8 54.0 -90.1 -37.7 -9.8 11.1 -6.8 70 70 A A S < S+ 0 0 90 -4,-2.6 2,-0.5 -5,-0.2 -1,-0.2 0.241 80.5 120.2 -84.8 13.7 -12.8 13.2 -5.8 71 71 A A - 0 0 35 -3,-0.2 2,-2.6 -5,-0.1 4,-0.1 -0.705 68.8-131.7 -81.2 124.5 -11.8 15.9 -8.3 72 72 A K + 0 0 205 -2,-0.5 2,-0.3 2,-0.1 -1,-0.1 -0.442 68.9 111.5 -79.3 69.4 -14.6 16.4 -10.9 73 73 A L S S- 0 0 131 -2,-2.6 2,-1.1 2,-0.0 -2,-0.0 -0.922 79.7 -93.2-134.3 160.3 -12.3 16.2 -13.8 74 74 A E - 0 0 168 -2,-0.3 2,-1.7 1,-0.1 -2,-0.1 -0.670 31.8-169.1 -80.8 101.4 -11.8 13.7 -16.6 75 75 A H - 0 0 70 -2,-1.1 2,-2.2 -4,-0.1 -1,-0.1 -0.570 11.9-173.6 -85.4 71.1 -9.1 11.3 -15.5 76 76 A H + 0 0 153 -2,-1.7 -2,-0.1 1,-0.1 -1,-0.1 -0.476 46.1 104.3 -74.8 77.6 -8.8 9.8 -18.9 77 77 A H + 0 0 132 -2,-2.2 -1,-0.1 -62,-0.1 3,-0.1 -0.495 32.1 118.3-151.1 75.2 -6.4 6.9 -18.2 78 78 A H S S- 0 0 72 1,-0.4 2,-0.3 -63,-0.1 -62,-0.1 0.783 82.2 -2.8-105.9 -47.5 -8.4 3.7 -18.1 79 79 A H 0 0 148 -64,-0.1 -1,-0.4 -63,-0.1 -64,-0.0 -0.992 360.0 360.0-147.3 146.4 -6.9 1.6 -20.9 80 80 A H 0 0 229 -2,-0.3 -3,-0.0 -3,-0.1 0, 0.0 -0.804 360.0 360.0-111.6 360.0 -4.2 2.2 -23.5