==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 24-SEP-07 2JVO . COMPND 2 MOLECULE: NUCLEOLAR PROTEIN 3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR L.SKRISOVSKA,F.H-T.ALLAIN . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4569.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 64.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 23.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 20.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 28 A E 0 0 209 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.5 4.8 14.2 10.0 2 29 A L - 0 0 101 74,-0.0 71,-0.1 71,-0.0 72,-0.1 -0.624 360.0 -57.1-145.3-154.9 5.7 10.6 8.9 3 30 A S S S- 0 0 36 69,-0.4 2,-0.9 -2,-0.2 70,-0.1 0.664 71.1-166.8 -64.2 -15.8 5.9 9.2 5.3 4 31 A N + 0 0 41 1,-0.2 47,-0.2 68,-0.2 48,-0.1 0.159 67.7 46.4 51.6 -11.4 2.2 10.5 5.3 5 32 A T S S+ 0 0 20 -2,-0.9 40,-1.7 68,-0.1 2,-0.5 0.157 79.4 111.7-146.8 22.9 1.2 8.6 2.0 6 33 A R E -AB 44 71A 14 65,-0.7 67,-1.8 38,-0.2 65,-1.4 -0.909 45.6-151.3-129.8 129.5 2.3 4.9 1.9 7 34 A L E -AB 43 70A 0 36,-1.7 36,-2.2 -2,-0.5 2,-1.0 -0.777 7.5-158.8-105.4 111.0 0.5 1.7 2.0 8 35 A F E +AB 42 69A 34 61,-2.1 61,-2.0 -2,-0.7 2,-0.7 -0.775 21.3 172.9-100.1 93.7 2.5 -1.2 3.5 9 36 A V E +A 41 0A 1 32,-2.7 32,-2.2 -2,-1.0 59,-0.1 -0.893 16.1 141.9-123.0 92.7 0.7 -4.2 2.0 10 37 A R + 0 0 87 -2,-0.7 -1,-0.1 30,-0.2 58,-0.1 0.078 31.5 104.9-127.6 19.2 2.5 -7.5 2.7 11 38 A P S S+ 0 0 4 0, 0.0 29,-0.1 0, 0.0 -1,-0.1 0.854 70.1 77.0 -72.1 -34.8 -0.1 -10.3 3.4 12 39 A F S S- 0 0 16 1,-0.1 52,-0.0 27,-0.1 2,-0.0 -0.222 73.8-128.4 -76.6 159.0 0.3 -12.0 0.0 13 40 A P > - 0 0 66 0, 0.0 3,-1.5 0, 0.0 26,-0.3 -0.009 66.7 -54.4 -80.3-160.0 3.0 -14.3 -1.4 14 41 A L T 3 S+ 0 0 115 1,-0.3 25,-0.1 24,-0.2 26,-0.1 0.571 121.0 88.8 -54.3 -13.1 4.7 -13.6 -4.9 15 42 A D T 3 + 0 0 122 23,-0.1 -1,-0.3 24,-0.1 2,-0.2 0.758 64.7 93.8 -61.1 -31.5 1.1 -13.5 -6.4 16 43 A V < + 0 0 3 -3,-1.5 2,-0.3 21,-0.1 23,-0.2 -0.450 47.9 156.3 -69.3 137.3 0.6 -9.7 -5.8 17 44 A Q >> - 0 0 76 -2,-0.2 4,-2.3 19,-0.0 3,-1.1 -0.884 61.8 -82.3-142.2 177.2 1.5 -7.3 -8.6 18 45 A E H 3> S+ 0 0 104 -2,-0.3 4,-1.9 1,-0.2 -2,-0.0 0.751 127.7 60.2 -56.0 -22.9 0.5 -3.7 -9.6 19 46 A S H 3> S+ 0 0 56 2,-0.2 4,-1.6 3,-0.2 -1,-0.2 0.830 106.8 43.8 -71.2 -33.0 -2.7 -5.4 -11.3 20 47 A E H <> S+ 0 0 79 -3,-1.1 4,-1.8 2,-0.2 -2,-0.2 0.868 114.6 48.9 -83.2 -37.0 -3.9 -6.8 -7.9 21 48 A L H X>S+ 0 0 0 -4,-2.3 4,-3.4 2,-0.2 5,-0.7 0.910 107.3 56.6 -66.1 -37.8 -3.1 -3.5 -6.3 22 49 A N H X5S+ 0 0 91 -4,-1.9 4,-1.3 -5,-0.3 -2,-0.2 0.911 107.3 49.1 -59.5 -39.3 -5.0 -1.9 -9.2 23 50 A E H <5S+ 0 0 161 -4,-1.6 -1,-0.2 1,-0.1 -2,-0.2 0.891 122.0 33.1 -61.0 -42.2 -8.0 -4.1 -8.1 24 51 A I H <5S+ 0 0 31 -4,-1.8 -2,-0.2 2,-0.1 -3,-0.2 0.846 129.5 32.2 -84.1 -39.3 -7.7 -3.0 -4.4 25 52 A F H >X5S+ 0 0 0 -4,-3.4 3,-2.0 1,-0.1 4,-0.9 0.692 96.2 82.4-100.9 -27.0 -6.5 0.7 -4.7 26 53 A G T 3< -C 40 0A 78 3,-3.2 2,-3.0 -2,-0.5 3,-1.2 -0.719 57.2 -52.7-133.3 178.8 8.8 -7.0 -3.9 38 65 A N T 3 S- 0 0 133 1,-0.3 -24,-0.2 -2,-0.2 3,-0.1 -0.127 126.3 -24.0 -57.6 47.2 8.9 -10.8 -2.9 39 66 A G T 3 S+ 0 0 5 -2,-3.0 2,-0.4 1,-0.3 -1,-0.3 0.394 123.9 99.5 116.9 6.4 5.5 -10.8 -1.2 40 67 A F E < - C 0 37A 83 -3,-1.2 -3,-3.2 -24,-0.1 2,-0.4 -0.966 47.0-169.7-132.3 143.2 5.4 -7.1 -0.4 41 68 A A E -AC 9 36A 0 -32,-2.2 -32,-2.7 -2,-0.4 2,-0.5 -0.989 3.7-169.6-126.7 135.9 3.8 -3.9 -2.0 42 69 A F E -AC 8 35A 14 -7,-2.3 -7,-2.3 -2,-0.4 -34,-0.2 -0.864 18.4-174.3-127.6 84.7 4.6 -0.4 -0.9 43 70 A V E -AC 7 34A 0 -36,-2.2 -36,-1.7 -2,-0.5 2,-0.3 -0.418 5.0-170.4 -77.9 162.3 2.0 1.7 -2.6 44 71 A E E -AC 6 33A 27 -11,-2.3 -11,-2.0 -38,-0.3 -12,-1.0 -0.996 16.8-157.7-156.6 152.7 2.2 5.5 -2.4 45 72 A F - 0 0 1 -40,-1.7 -40,-0.0 -2,-0.3 3,-0.0 -0.881 27.3-128.1-130.7 161.6 0.4 8.7 -3.1 46 73 A E S S+ 0 0 165 -2,-0.3 2,-0.3 -13,-0.0 -41,-0.0 0.437 94.7 35.4 -88.7 1.0 1.6 12.4 -3.7 47 74 A E S > S- 0 0 70 -42,-0.1 4,-0.6 -43,-0.0 -2,-0.1 -0.914 81.1-116.2-148.0 169.8 -1.0 13.6 -1.0 48 75 A A H > S+ 0 0 49 -2,-0.3 4,-2.3 2,-0.2 5,-0.1 0.458 98.7 71.8 -95.8 -1.1 -2.5 12.5 2.3 49 76 A E H > S+ 0 0 125 2,-0.2 4,-2.4 3,-0.2 5,-0.2 0.886 97.9 48.2 -83.7 -40.0 -6.2 12.2 1.3 50 77 A S H > S+ 0 0 1 2,-0.2 4,-2.7 1,-0.2 -2,-0.2 0.888 114.6 49.9 -62.6 -35.0 -5.7 9.0 -0.8 51 78 A A H X S+ 0 0 0 -4,-0.6 4,-2.9 2,-0.2 -2,-0.2 0.968 108.6 50.4 -65.8 -51.0 -3.8 7.7 2.2 52 79 A A H X S+ 0 0 39 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.914 118.1 39.2 -53.7 -47.6 -6.6 8.7 4.7 53 80 A K H X S+ 0 0 65 -4,-2.4 4,-2.5 2,-0.2 -1,-0.2 0.921 111.5 56.5 -71.7 -39.1 -9.2 6.9 2.6 54 81 A A H X>S+ 0 0 0 -4,-2.7 4,-2.2 -5,-0.2 5,-0.7 0.940 110.4 47.8 -54.9 -46.2 -6.9 4.0 1.7 55 82 A I H X5S+ 0 0 35 -4,-2.9 4,-2.1 1,-0.2 3,-0.3 0.972 114.4 43.8 -54.1 -59.8 -6.5 3.5 5.5 56 83 A E H <5S+ 0 0 154 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.782 116.7 49.2 -64.0 -23.0 -10.3 3.6 6.1 57 84 A E H <5S- 0 0 115 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.844 136.6 -7.4 -80.3 -38.4 -11.0 1.3 3.0 58 85 A V H ><5S+ 0 0 18 -4,-2.2 3,-1.2 -3,-0.3 10,-0.5 0.454 84.8 126.9-152.5 -2.5 -8.5 -1.5 3.7 59 86 A H T 3< -D 66 0B 89 3,-1.5 2,-2.8 -2,-1.0 3,-2.3 -0.764 64.1 -28.4 -90.9 140.8 -6.5 -9.9 2.7 64 91 A A T 3 S- 0 0 73 -2,-0.4 -1,-0.1 1,-0.3 -2,-0.1 -0.277 137.0 -21.5 57.6 -59.3 -5.6 -13.4 1.4 65 92 A N T 3 S+ 0 0 107 -2,-2.8 -1,-0.3 1,-0.4 -3,-0.1 0.334 130.6 22.4-155.2 -8.7 -4.5 -14.9 4.8 66 93 A Q E < S-D 63 0B 96 -3,-2.3 -3,-1.5 -5,-0.1 -1,-0.4 -0.975 82.8 -77.7-162.4 164.6 -3.6 -11.8 7.0 67 94 A P E -D 62 0B 72 0, 0.0 -57,-0.2 0, 0.0 -5,-0.2 -0.354 37.5-119.7 -77.9 157.8 -4.2 -8.0 7.5 68 95 A L - 0 0 10 -7,-1.4 -8,-0.8 -10,-0.5 -59,-0.2 -0.409 1.6-149.3 -80.3 162.3 -2.8 -5.0 5.7 69 96 A E E +B 8 0A 32 -61,-2.0 -61,-2.1 -10,-0.1 2,-0.7 -0.453 29.6 167.7-130.6 51.3 -0.7 -2.0 7.0 70 97 A V E +B 7 0A 0 -63,-0.3 -63,-0.3 -12,-0.1 2,-0.1 -0.613 41.7 89.9 -64.2 103.5 -2.0 0.6 4.5 71 98 A V E S-B 6 0A 29 -65,-1.4 -65,-0.7 -2,-0.7 2,-0.5 -0.398 94.3 -29.1-159.9-135.5 -0.6 3.7 6.2 72 99 A Y S S- 0 0 94 -67,-0.2 -69,-0.4 -2,-0.1 -68,-0.2 -0.775 78.6-136.3-106.0 68.3 2.4 6.1 6.5 73 100 A S - 0 0 0 -67,-1.8 2,-0.5 -2,-0.5 -68,-0.1 -0.021 8.2-119.8 -44.2 137.3 4.7 3.1 5.5 74 101 A K S S+ 0 0 146 -72,-0.1 -1,-0.2 -68,-0.1 -2,-0.0 0.152 86.1 91.1 -69.0 16.0 8.0 2.9 7.6 75 102 A L - 0 0 62 -2,-0.5 -69,-0.0 1,-0.1 -2,-0.0 -0.968 57.9-160.3-116.4 130.1 10.3 3.3 4.5 76 103 A P 0 0 132 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.503 360.0 360.0 -84.4 -6.2 11.6 6.8 3.4 77 104 A A 0 0 80 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.952 360.0 360.0-133.8 360.0 12.5 5.5 -0.2