==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-JAN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 26-SEP-07 2JVV . COMPND 2 MOLECULE: TRANSCRIPTION ANTITERMINATION PROTEIN NUSG; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR K.SCHWEIMER,U.SCHECKENHOFER,P.ROESCH . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4390.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 64.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 26 44.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 123 A R 0 0 280 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 63.2 12.5 -11.4 23.5 2 124 A P - 0 0 97 0, 0.0 2,-0.3 0, 0.0 55,-0.0 -0.190 360.0-120.1 -56.6 145.9 10.9 -8.5 21.6 3 125 A K - 0 0 137 1,-0.1 55,-0.2 2,-0.1 0, 0.0 -0.683 10.8-155.1 -91.2 144.1 7.1 -8.4 21.5 4 126 A T + 0 0 91 -2,-0.3 2,-1.1 53,-0.1 -1,-0.1 0.278 64.7 107.5 -99.4 12.1 5.3 -8.5 18.1 5 127 A L + 0 0 128 2,-0.0 2,-0.4 53,-0.0 -2,-0.1 -0.738 44.4 162.2 -92.7 98.8 2.2 -6.8 19.5 6 128 A F - 0 0 4 -2,-1.1 6,-0.0 52,-0.1 -2,-0.0 -0.902 12.9-175.8-117.6 146.5 2.2 -3.3 18.2 7 129 A E > - 0 0 121 -2,-0.4 3,-2.1 4,-0.1 19,-0.4 -0.952 39.9 -75.8-138.6 159.3 -0.8 -0.8 18.0 8 130 A P T 3 S+ 0 0 77 0, 0.0 19,-0.2 0, 0.0 3,-0.1 -0.247 120.4 22.0 -53.5 129.4 -1.5 2.7 16.6 9 131 A G T 3 S+ 0 0 49 17,-1.6 2,-0.4 1,-0.3 18,-0.1 0.453 93.1 132.2 90.5 -1.2 0.1 5.3 18.9 10 132 A E E < -A 26 0A 79 -3,-2.1 16,-2.6 16,-0.6 -1,-0.3 -0.679 56.8-126.9 -86.5 135.5 2.6 2.8 20.3 11 133 A M E -A 25 0A 81 -2,-0.4 48,-1.8 14,-0.3 14,-0.3 -0.529 30.7-174.4 -79.6 146.9 6.2 3.9 20.4 12 134 A V E -AB 24 58A 0 12,-3.8 12,-1.6 46,-0.2 2,-0.4 -0.762 18.7-123.6-131.5 179.2 8.8 1.6 18.8 13 135 A R E -AB 23 57A 117 44,-2.5 44,-2.9 -2,-0.2 2,-0.5 -0.985 13.1-147.8-130.3 138.3 12.6 1.4 18.5 14 136 A V E +AB 22 56A 1 8,-3.1 7,-2.5 -2,-0.4 8,-1.1 -0.878 26.2 159.4-106.6 132.8 14.7 1.3 15.3 15 137 A N + 0 0 63 40,-1.9 2,-0.3 -2,-0.5 5,-0.2 0.124 57.1 68.7-135.6 20.4 18.0 -0.6 15.3 16 138 A D S S+ 0 0 88 39,-0.4 3,-0.5 3,-0.1 -1,-0.0 -0.993 89.1 5.7-140.9 148.2 18.6 -1.3 11.6 17 139 A G S > S- 0 0 38 -2,-0.3 3,-2.6 1,-0.2 -3,-0.0 -0.041 112.9 -46.2 70.2 177.2 19.4 1.0 8.6 18 140 A P T 3 S+ 0 0 115 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.716 138.0 64.9 -55.0 -20.2 20.1 4.7 8.9 19 141 A F T > S+ 0 0 50 -3,-0.5 3,-0.6 3,-0.0 -5,-0.2 0.394 76.7 123.1 -85.6 6.7 17.1 4.9 11.2 20 142 A A T < + 0 0 31 -3,-2.6 -5,-0.3 1,-0.2 3,-0.1 -0.343 67.1 30.7 -66.2 148.9 18.9 2.7 13.7 21 143 A D T 3 S+ 0 0 129 -7,-2.5 2,-0.3 1,-0.3 -1,-0.2 0.839 102.0 108.4 73.1 30.0 19.3 4.2 17.2 22 144 A F E < -A 14 0A 88 -8,-1.1 -8,-3.1 -3,-0.6 2,-0.3 -0.979 53.9-150.3-138.1 151.5 16.1 6.1 16.8 23 145 A N E +A 13 0A 80 -2,-0.3 18,-0.8 -10,-0.2 2,-0.3 -0.786 24.2 148.0-118.0 164.1 12.6 5.8 18.4 24 146 A G E -AC 12 40A 6 -12,-1.6 -12,-3.8 -2,-0.3 2,-0.3 -0.962 40.2 -92.4-172.2-173.7 9.1 6.7 17.0 25 147 A V E -AC 11 39A 38 14,-0.7 14,-1.3 -14,-0.3 2,-1.0 -0.893 28.2-122.5-120.3 151.6 5.4 5.8 17.1 26 148 A V E +AC 10 38A 0 -16,-2.6 -17,-1.6 -19,-0.4 -16,-0.6 -0.750 28.2 176.0 -94.4 98.8 3.5 3.4 14.7 27 149 A E E S+ 0 0 123 10,-1.4 2,-0.3 -2,-1.0 -1,-0.2 0.894 74.3 18.3 -69.4 -36.7 0.6 5.5 13.3 28 150 A E E S- C 0 37A 93 9,-1.4 9,-3.0 -3,-0.2 2,-0.3 -0.973 70.3-158.1-134.4 149.6 -0.5 2.6 11.1 29 151 A V E - C 0 36A 26 -2,-0.3 2,-0.3 7,-0.2 7,-0.2 -0.941 5.1-165.2-127.3 150.2 0.2 -1.1 11.2 30 152 A D E >> + C 0 35A 29 5,-1.9 5,-2.3 -2,-0.3 4,-0.6 -0.723 14.0 168.9-136.2 87.8 0.1 -3.8 8.4 31 153 A Y T 45S+ 0 0 134 -2,-0.3 3,-0.4 3,-0.2 -1,-0.1 0.898 83.4 54.9 -66.3 -37.1 0.1 -7.4 9.7 32 154 A E T 45S+ 0 0 188 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.940 117.4 34.7 -62.6 -44.3 -0.8 -8.7 6.3 33 155 A K T 45S- 0 0 148 2,-0.2 -1,-0.2 -4,-0.0 -2,-0.2 0.467 107.3-129.4 -88.6 0.6 2.2 -6.9 4.7 34 156 A S T <5 + 0 0 61 -4,-0.6 2,-0.3 -3,-0.4 19,-0.2 0.959 67.2 122.5 52.5 52.0 4.3 -7.6 7.8 35 157 A R E < -C 30 0A 80 -5,-2.3 -5,-1.9 17,-0.1 2,-0.5 -0.998 52.8-145.2-145.3 140.5 5.2 -3.9 8.0 36 158 A L E -CD 29 51A 1 15,-2.2 15,-2.0 -2,-0.3 2,-1.2 -0.888 12.9-139.7-108.5 134.3 4.8 -1.2 10.7 37 159 A K E +CD 28 50A 76 -9,-3.0 -10,-1.4 -2,-0.5 -9,-1.4 -0.704 42.3 151.6 -92.5 93.1 4.2 2.5 9.8 38 160 A V E -CD 26 49A 2 11,-2.1 11,-3.7 -2,-1.2 2,-0.3 -0.955 32.6-146.5-124.1 142.0 6.3 4.4 12.2 39 161 A S E -CD 25 48A 18 -14,-1.3 -14,-0.7 -2,-0.4 2,-0.5 -0.808 10.4-140.2-106.3 147.7 7.9 7.9 11.7 40 162 A V E -CD 24 47A 2 7,-1.0 2,-2.0 -2,-0.3 7,-0.6 -0.892 19.3-123.2-108.5 132.7 11.3 8.9 13.2 41 163 A S E + D 0 46A 83 -18,-0.8 2,-0.4 -2,-0.5 3,-0.3 -0.470 49.7 162.8 -72.1 85.2 11.8 12.5 14.7 42 164 A I E > + D 0 45A 35 3,-2.3 3,-2.5 -2,-2.0 -2,-0.0 -0.866 64.5 1.3-108.3 139.9 14.7 13.4 12.5 43 165 A F T 3 S- 0 0 197 -2,-0.4 -1,-0.2 1,-0.3 3,-0.1 0.745 131.5 -63.0 61.0 17.9 15.9 17.0 12.0 44 166 A G T 3 S+ 0 0 75 -3,-0.3 2,-0.4 1,-0.3 -1,-0.3 0.556 121.6 101.5 83.8 5.2 13.0 17.9 14.4 45 167 A R E < S-D 42 0A 192 -3,-2.5 -3,-2.3 -5,-0.1 -1,-0.3 -0.947 79.3-109.4-124.1 144.4 10.5 16.5 11.8 46 168 A A E -D 41 0A 62 -2,-0.4 -5,-0.2 -5,-0.3 -22,-0.1 -0.431 24.1-158.2 -69.2 142.1 8.7 13.2 11.9 47 169 A T E -D 40 0A 42 -7,-0.6 -7,-1.0 -2,-0.1 2,-0.2 -0.630 8.5-152.1-124.4 75.8 9.9 10.7 9.2 48 170 A P E +D 39 0A 88 0, 0.0 -9,-0.4 0, 0.0 2,-0.3 -0.220 30.6 164.4 -47.9 106.5 7.1 8.2 8.7 49 171 A V E -D 38 0A 25 -11,-3.7 -11,-2.1 -2,-0.2 2,-0.6 -0.924 39.0-118.1-128.7 155.1 9.0 5.1 7.5 50 172 A E E +D 37 0A 96 -2,-0.3 2,-0.4 -13,-0.2 -13,-0.2 -0.803 36.2 176.4 -95.0 123.3 8.0 1.4 7.2 51 173 A L E -D 36 0A 14 -15,-2.0 -15,-2.2 -2,-0.6 5,-0.1 -0.944 28.4-116.9-126.0 147.9 10.1 -1.0 9.4 52 174 A D > - 0 0 53 -2,-0.4 4,-1.4 -17,-0.2 -17,-0.1 -0.317 32.5-107.8 -75.8 164.9 9.8 -4.7 9.9 53 175 A F T 4 S+ 0 0 55 1,-0.2 3,-0.3 -19,-0.2 -1,-0.1 0.924 124.3 42.2 -60.7 -41.2 9.0 -6.1 13.4 54 176 A S T 4 S+ 0 0 110 1,-0.2 -1,-0.2 3,-0.1 -39,-0.1 0.803 107.2 62.3 -76.1 -26.3 12.6 -7.4 13.7 55 177 A Q T 4 S+ 0 0 55 -41,-0.1 -40,-1.9 -40,-0.0 -39,-0.4 0.810 114.7 32.4 -69.0 -25.8 13.9 -4.2 12.2 56 178 A V E < S-B 14 0A 1 -4,-1.4 2,-0.3 -3,-0.3 -42,-0.3 -0.902 78.4-134.3-128.4 158.7 12.4 -2.2 15.2 57 179 A E E -B 13 0A 73 -44,-2.9 -44,-2.5 -2,-0.3 2,-0.2 -0.855 29.3-104.2-113.1 149.2 11.9 -3.1 18.8 58 180 A K E B 12 0A 82 -2,-0.3 -46,-0.2 -46,-0.2 -55,-0.1 -0.476 360.0 360.0 -69.9 135.8 8.7 -2.5 20.9 59 181 A A 0 0 83 -48,-1.8 -47,-0.2 -2,-0.2 -1,-0.2 0.810 360.0 360.0-102.0 360.0 9.1 0.4 23.3