==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=11-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 16-SEP-09 3JVE . COMPND 2 MOLECULE: DNA TOPOISOMERASE 2-BINDING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.C.LEUNG,E.KELLOGG,D.BAKER,J.N.M.GLOVER . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5867.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 66.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 12 12.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 23.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 901 A A 0 0 131 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 123.9 15.9 51.4 2.3 2 902 A P - 0 0 137 0, 0.0 29,-0.0 0, 0.0 3,-0.0 -0.142 360.0-175.6 -55.7 136.0 17.1 54.1 4.7 3 903 A K > - 0 0 114 28,-0.1 3,-1.7 27,-0.0 27,-0.1 -0.986 31.6-121.4-130.7 149.9 16.1 57.8 4.1 4 904 A P T 3 S+ 0 0 39 0, 0.0 27,-0.2 0, 0.0 79,-0.1 0.744 106.7 41.7 -68.6 -27.6 17.5 60.6 6.2 5 905 A L T > S+ 0 0 0 25,-3.0 3,-2.1 22,-0.2 28,-0.3 0.076 75.8 147.1-106.8 23.5 14.2 62.0 7.6 6 906 A H T < S+ 0 0 125 -3,-1.7 26,-0.2 1,-0.3 3,-0.1 -0.339 73.9 19.1 -49.5 135.6 12.5 58.7 8.3 7 907 A K T 3 S+ 0 0 169 24,-0.5 2,-0.3 1,-0.3 -1,-0.3 0.366 95.0 123.4 75.9 -4.1 10.2 59.2 11.4 8 908 A V < - 0 0 7 -3,-2.1 25,-2.9 23,-0.1 2,-0.5 -0.692 45.2-162.4 -79.0 140.2 10.2 63.0 11.0 9 909 A V E -a 33 0A 18 -2,-0.3 34,-2.6 23,-0.2 35,-2.2 -0.954 12.1-162.0-124.1 108.0 6.7 64.4 10.7 10 910 A V E -ab 34 44A 0 23,-2.7 25,-2.4 -2,-0.5 2,-0.4 -0.599 12.7-173.5 -89.6 151.8 6.8 68.0 9.3 11 911 A C E -ab 35 45A 0 33,-2.0 35,-2.7 -2,-0.2 2,-0.5 -0.949 18.0-141.9-140.4 124.1 4.1 70.7 9.5 12 912 A V E - b 0 46A 4 23,-0.5 35,-0.1 -2,-0.4 26,-0.1 -0.721 28.8-112.7 -86.3 128.9 4.5 73.9 7.6 13 913 A S > - 0 0 0 33,-2.5 3,-1.2 -2,-0.5 -1,-0.1 -0.155 20.9-114.7 -57.5 154.0 3.2 77.0 9.5 14 914 A K G > S+ 0 0 145 1,-0.3 3,-1.9 2,-0.2 4,-0.2 0.834 116.4 64.9 -56.5 -35.2 0.2 78.9 8.3 15 915 A K G 3 S+ 0 0 95 1,-0.3 3,-0.3 2,-0.1 -1,-0.3 0.857 104.6 45.7 -56.6 -35.1 2.5 81.8 7.7 16 916 A L G X S+ 0 0 19 -3,-1.2 3,-1.9 30,-0.2 4,-0.5 0.062 74.7 127.4 -97.6 25.0 4.3 79.7 5.1 17 917 A S G X + 0 0 68 -3,-1.9 3,-1.1 1,-0.3 4,-0.4 0.806 65.7 61.0 -54.4 -34.9 1.1 78.5 3.4 18 918 A K G 3 S+ 0 0 199 -3,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.770 113.5 37.5 -64.7 -23.7 2.1 79.5 -0.1 19 919 A K G <> S+ 0 0 84 -3,-1.9 4,-2.8 1,-0.1 -1,-0.3 0.321 89.4 104.1-103.2 0.4 5.1 77.2 0.2 20 920 A Q H <> S+ 0 0 31 -3,-1.1 4,-2.8 -4,-0.5 5,-0.2 0.904 79.6 42.9 -61.0 -52.6 3.4 74.4 2.0 21 921 A S H > S+ 0 0 80 -4,-0.4 4,-2.2 2,-0.2 -1,-0.2 0.915 116.3 50.0 -60.4 -41.3 2.8 71.8 -0.7 22 922 A E H > S+ 0 0 137 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.935 113.4 44.9 -61.8 -47.6 6.4 72.3 -2.0 23 923 A L H X S+ 0 0 3 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.891 110.0 54.7 -65.4 -39.1 7.9 72.0 1.4 24 924 A N H X S+ 0 0 3 -4,-2.8 4,-2.6 -5,-0.2 -1,-0.2 0.921 110.7 47.6 -56.9 -43.6 5.8 68.9 2.2 25 925 A G H X S+ 0 0 35 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.862 109.0 52.0 -68.7 -35.8 7.1 67.3 -1.0 26 926 A I H X S+ 0 0 38 -4,-2.0 4,-0.8 2,-0.2 -1,-0.2 0.940 113.0 46.0 -63.7 -45.0 10.7 68.2 -0.2 27 927 A A H ><>S+ 0 0 0 -4,-2.6 5,-2.3 1,-0.2 3,-0.9 0.918 111.2 52.2 -62.1 -44.7 10.3 66.6 3.2 28 928 A A H ><5S+ 0 0 43 -4,-2.6 3,-2.0 1,-0.3 -1,-0.2 0.868 101.7 59.7 -63.4 -34.2 8.6 63.5 1.8 29 929 A S H 3<5S+ 0 0 94 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.770 105.3 51.0 -64.2 -25.2 11.5 63.0 -0.8 30 930 A L T <<5S- 0 0 11 -3,-0.9 -25,-3.0 -4,-0.8 -1,-0.3 0.310 130.0 -97.9 -92.9 7.5 13.7 62.7 2.3 31 931 A G T < 5S+ 0 0 21 -3,-2.0 -24,-0.5 1,-0.3 -3,-0.2 0.435 78.3 137.3 93.5 2.8 11.4 60.0 3.9 32 932 A A < - 0 0 5 -5,-2.3 -1,-0.3 -26,-0.2 2,-0.2 -0.412 47.7-133.4 -77.2 156.6 9.4 62.3 6.2 33 933 A D E -a 9 0A 95 -25,-2.9 -23,-2.7 -28,-0.3 2,-0.3 -0.561 24.4-153.7 -91.1 169.3 5.7 62.3 6.8 34 934 A Y E -a 10 0A 93 -25,-0.3 2,-0.4 -2,-0.2 -23,-0.2 -0.990 11.7-151.8-145.8 153.8 3.8 65.5 6.8 35 935 A R E -a 11 0A 71 -25,-2.4 -23,-0.5 -2,-0.3 3,-0.1 -0.958 17.2-140.9-120.9 145.1 0.6 67.0 8.3 36 936 A W S S+ 0 0 137 -2,-0.4 2,-0.3 -25,-0.1 -25,-0.1 0.672 90.5 15.1 -76.3 -19.0 -1.5 69.8 6.7 37 937 A S S S- 0 0 74 -26,-0.0 -1,-0.1 -24,-0.0 2,-0.1 -0.957 100.9 -75.2-150.9 162.6 -2.1 71.4 10.1 38 938 A F + 0 0 52 -2,-0.3 2,-0.3 -26,-0.1 -2,-0.1 -0.350 58.5 145.9 -72.2 136.5 -0.6 71.1 13.5 39 939 A D > - 0 0 41 -2,-0.1 3,-1.6 -4,-0.0 -4,-0.0 -0.911 62.3 -79.3-151.5-175.7 -1.3 68.0 15.7 40 940 A E T 3 S+ 0 0 162 -2,-0.3 -2,-0.1 1,-0.3 0, 0.0 0.553 119.8 61.7 -68.4 -13.8 0.2 65.7 18.3 41 941 A T T 3 S+ 0 0 60 -31,-0.0 -1,-0.3 2,-0.0 2,-0.1 0.624 77.8 109.8 -84.6 -16.1 2.1 63.6 15.6 42 942 A V < + 0 0 6 -3,-1.6 -32,-0.2 1,-0.2 3,-0.1 -0.407 35.3 172.2 -69.8 133.5 4.2 66.6 14.4 43 943 A T S S+ 0 0 47 -34,-2.6 24,-1.5 1,-0.3 2,-0.4 0.666 70.9 37.6-106.1 -26.0 7.9 66.5 15.3 44 944 A H E -bc 10 67A 7 -35,-2.2 -33,-2.0 22,-0.2 2,-0.5 -0.982 63.3-164.8-137.8 116.7 9.1 69.5 13.2 45 945 A F E -bc 11 68A 0 22,-3.1 24,-2.5 -2,-0.4 2,-0.6 -0.912 17.0-142.5-103.6 123.5 7.2 72.7 12.7 46 946 A I E +bc 12 69A 0 -35,-2.7 -33,-2.5 -2,-0.5 2,-0.3 -0.787 37.4 150.3 -93.6 120.2 8.5 74.9 9.9 47 947 A Y - 0 0 0 22,-2.4 2,-0.4 -2,-0.6 -2,-0.0 -0.995 34.3-155.9-155.4 144.6 8.3 78.6 10.8 48 948 A Q + 0 0 40 -2,-0.3 2,-0.3 22,-0.1 44,-0.2 -0.989 41.4 115.2-120.9 127.3 10.1 81.9 10.1 49 949 A G - 0 0 26 42,-2.4 3,-0.1 -2,-0.4 -2,-0.0 -0.866 50.4 -79.0-166.9-157.0 9.8 84.8 12.6 50 950 A R > - 0 0 122 -2,-0.3 3,-1.1 1,-0.1 41,-0.1 -0.697 54.5 -73.0-121.6 162.8 11.3 87.2 15.1 51 951 A P T 3 S+ 0 0 98 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.368 120.6 10.3 -55.4 141.9 12.5 87.2 18.7 52 952 A N T 3 S- 0 0 153 1,-0.2 0, 0.0 -3,-0.1 0, 0.0 0.849 92.1-166.2 49.9 43.8 9.4 87.1 21.1 53 953 A D < - 0 0 7 -3,-1.1 -1,-0.2 1,-0.1 -4,-0.0 -0.286 17.4-156.3 -58.4 138.8 7.2 86.4 18.2 54 954 A T + 0 0 92 4,-0.0 -1,-0.1 5,-0.0 -2,-0.0 0.379 43.5 135.9-102.2 3.3 3.5 86.8 19.0 55 955 A N > - 0 0 48 1,-0.1 4,-2.6 2,-0.1 5,-0.2 -0.302 52.1-140.4 -57.0 129.6 2.1 84.5 16.2 56 956 A R H > S+ 0 0 215 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.916 98.7 46.3 -63.1 -48.4 -0.7 82.4 17.7 57 957 A E H > S+ 0 0 22 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.944 113.7 50.3 -60.5 -47.7 0.1 79.1 15.9 58 958 A Y H > S+ 0 0 16 1,-0.2 4,-2.6 2,-0.2 -2,-0.2 0.933 110.0 49.9 -53.2 -49.1 3.9 79.5 16.7 59 959 A K H X S+ 0 0 108 -4,-2.6 4,-1.6 1,-0.2 -1,-0.2 0.888 109.4 52.0 -63.9 -35.8 3.2 80.2 20.4 60 960 A S H X S+ 0 0 46 -4,-2.1 4,-0.7 1,-0.2 -1,-0.2 0.904 111.9 45.3 -64.5 -42.5 1.0 77.0 20.6 61 961 A V H >X>S+ 0 0 0 -4,-2.2 3,-1.0 1,-0.2 5,-0.9 0.898 108.3 56.9 -70.0 -39.1 3.6 74.8 19.1 62 962 A K H ><5S+ 0 0 117 -4,-2.6 3,-1.1 1,-0.3 -1,-0.2 0.867 102.0 57.2 -59.8 -36.9 6.4 76.3 21.3 63 963 A E H 3<5S+ 0 0 166 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.760 102.2 55.8 -62.8 -27.3 4.3 75.3 24.3 64 964 A R H <<5S- 0 0 169 -3,-1.0 -1,-0.2 -4,-0.7 -2,-0.2 0.551 105.7-129.2 -86.6 -9.2 4.4 71.7 23.2 65 965 A G T <<5 + 0 0 68 -3,-1.1 -3,-0.2 -4,-0.6 2,-0.1 0.631 56.1 143.0 72.8 15.3 8.2 71.6 23.0 66 966 A V < - 0 0 38 -5,-0.9 -1,-0.2 1,-0.1 -22,-0.2 -0.423 62.8 -78.6 -81.9 164.9 8.5 70.2 19.5 67 967 A H E -c 44 0A 91 -24,-1.5 -22,-3.1 -2,-0.1 2,-0.5 -0.416 41.3-164.8 -64.1 131.7 11.2 71.3 17.1 68 968 A I E +c 45 0A 32 -24,-0.2 2,-0.3 -2,-0.1 23,-0.3 -0.990 20.7 172.8-116.5 118.0 10.6 74.7 15.5 69 969 A V E -c 46 0A 1 -24,-2.5 -22,-2.4 -2,-0.5 22,-0.1 -0.956 35.1-108.7-130.5 147.3 12.9 75.2 12.5 70 970 A S >> - 0 0 0 19,-2.0 3,-2.0 -2,-0.3 4,-0.7 -0.310 39.3-110.9 -57.2 150.6 13.5 77.6 9.7 71 971 A E H 3> S+ 0 0 20 1,-0.3 4,-2.3 2,-0.2 3,-0.4 0.800 115.8 74.1 -54.9 -25.8 12.5 76.4 6.2 72 972 A H H 3> S+ 0 0 69 1,-0.2 4,-2.5 2,-0.2 -1,-0.3 0.755 84.5 64.1 -62.8 -23.2 16.3 76.4 5.6 73 973 A W H <> S+ 0 0 0 -3,-2.0 4,-2.4 2,-0.2 -1,-0.2 0.959 108.4 40.1 -61.3 -49.4 16.6 73.3 7.8 74 974 A L H X S+ 0 0 0 -4,-0.7 4,-2.2 -3,-0.4 -2,-0.2 0.917 115.5 50.7 -66.5 -42.8 14.5 71.4 5.3 75 975 A L H X S+ 0 0 59 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.909 114.1 44.6 -62.7 -40.4 16.2 73.0 2.2 76 976 A D H X S+ 0 0 36 -4,-2.5 4,-2.4 2,-0.2 -1,-0.2 0.874 109.6 54.5 -74.4 -36.3 19.7 72.2 3.6 77 977 A C H X>S+ 0 0 0 -4,-2.4 5,-1.6 -5,-0.2 4,-1.5 0.912 111.2 48.1 -58.1 -39.2 18.7 68.6 4.6 78 978 A A H <5S+ 0 0 45 -4,-2.2 -2,-0.2 2,-0.2 3,-0.2 0.933 110.7 49.3 -67.6 -45.2 17.6 68.2 0.9 79 979 A Q H <5S+ 0 0 151 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.893 122.2 34.3 -59.6 -39.1 20.8 69.7 -0.5 80 980 A E H <5S- 0 0 84 -4,-2.4 -1,-0.2 2,-0.2 -2,-0.2 0.615 97.5-132.5 -90.1 -14.8 22.9 67.4 1.7 81 981 A C T <5S+ 0 0 83 -4,-1.5 2,-0.3 1,-0.2 -3,-0.2 0.928 71.6 113.7 50.9 49.4 20.7 64.3 1.8 82 982 A K S - 0 0 65 0, 0.0 3,-1.3 0, 0.0 4,-0.2 -0.381 30.1-149.9 -63.8 126.1 21.0 69.5 13.4 86 986 A E G > S+ 0 0 33 1,-0.2 3,-2.0 -2,-0.2 -16,-0.2 0.809 91.7 70.1 -62.6 -30.7 17.8 71.4 14.2 87 987 A S G 3 S+ 0 0 104 1,-0.3 -1,-0.2 2,-0.1 -3,-0.0 0.704 90.5 60.7 -64.9 -20.3 19.6 73.6 16.6 88 988 A L G < S+ 0 0 102 -3,-1.3 -1,-0.3 1,-0.2 -2,-0.2 0.585 103.5 53.3 -78.7 -8.9 21.4 75.3 13.7 89 989 A Y < + 0 0 19 -3,-2.0 -19,-2.0 -4,-0.2 -1,-0.2 -0.462 68.6 168.6-131.2 59.1 18.1 76.5 12.2 90 990 A P > - 0 0 56 0, 0.0 3,-2.3 0, 0.0 -20,-0.3 -0.200 54.6 -97.9 -65.0 169.7 16.0 78.4 14.8 91 991 A H T 3 S+ 0 0 23 -23,-0.3 -42,-2.4 1,-0.3 -20,-0.1 0.688 125.5 56.2 -65.6 -15.6 12.9 80.3 13.5 92 992 A T T 3 S+ 0 0 56 -44,-0.2 -1,-0.3 -22,-0.1 -44,-0.1 0.371 80.1 132.7 -92.7 1.1 15.0 83.5 13.4 93 993 A Y < 0 0 86 -3,-2.3 -21,-0.1 1,-0.0 -44,-0.1 -0.304 360.0 360.0 -61.5 133.3 17.7 82.0 11.2 94 994 A N 0 0 176 -24,-0.1 -2,-0.0 -22,-0.0 -1,-0.0 -0.948 360.0 360.0-137.0 360.0 18.8 84.0 8.2