==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 01-NOV-07 2JX1 . COMPND 2 MOLECULE: MYELIN TRANSCRIPTION FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR R.GAMSJAEGER,M.K.SWANTON,F.J.KOBUS,E.LEHTOMAKI,J.A.LOWRY, . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2237.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 7 22.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 9 A D 0 0 165 0, 0.0 3,-0.1 0, 0.0 22,-0.0 0.000 360.0 360.0 360.0-178.9 -1.3 -5.5 -9.4 2 10 A L + 0 0 153 1,-0.2 2,-0.3 2,-0.0 22,-0.1 0.572 360.0 9.7 -80.5 -9.3 -3.9 -8.3 -8.9 3 11 A K S S- 0 0 69 20,-0.4 -1,-0.2 8,-0.0 20,-0.2 -0.964 98.8 -78.0-163.9 152.4 -1.8 -9.4 -6.0 4 12 A C - 0 0 2 18,-0.4 20,-0.1 -2,-0.3 5,-0.1 -0.331 37.3-130.0 -57.0 134.3 1.1 -8.2 -3.9 5 13 A P S S+ 0 0 88 0, 0.0 -1,-0.2 0, 0.0 3,-0.0 0.685 83.7 102.2 -59.6 -19.3 4.5 -8.7 -5.7 6 14 A T > - 0 0 25 1,-0.2 3,-1.0 18,-0.1 -2,-0.1 -0.576 69.4-147.9 -71.3 117.9 5.7 -10.3 -2.5 7 15 A P T 3 S+ 0 0 126 0, 0.0 -1,-0.2 0, 0.0 24,-0.1 0.904 97.1 41.9 -52.5 -49.0 5.7 -14.1 -3.0 8 16 A G T 3 S+ 0 0 61 -3,-0.0 2,-0.5 2,-0.0 23,-0.1 0.543 94.7 99.9 -80.4 -5.6 4.9 -14.9 0.7 9 17 A C < - 0 0 2 -3,-1.0 -5,-0.1 1,-0.2 22,-0.1 -0.713 48.5-173.8 -87.3 125.2 2.4 -12.1 0.9 10 18 A D - 0 0 61 -2,-0.5 -1,-0.2 2,-0.1 -6,-0.2 0.829 33.5-132.4 -82.5 -37.0 -1.2 -13.2 0.7 11 19 A G S S+ 0 0 0 1,-0.1 11,-3.0 -8,-0.1 2,-1.3 0.267 71.1 116.5 102.3 -10.8 -2.6 -9.6 0.7 12 20 A S S S+ 0 0 61 9,-0.2 2,-0.3 11,-0.0 9,-0.3 -0.659 72.3 25.1 -93.9 81.2 -5.3 -10.2 3.2 13 21 A G - 0 0 14 -2,-1.3 2,-0.3 -3,-0.1 9,-0.1 -0.946 66.0-129.8 157.7-173.7 -4.2 -7.9 6.0 14 22 A H - 0 0 36 -2,-0.3 14,-0.1 1,-0.2 13,-0.1 -0.976 16.5-127.8-163.4 162.5 -2.2 -4.8 6.9 15 23 A I S S+ 0 0 117 12,-0.5 -1,-0.2 -2,-0.3 12,-0.1 0.964 110.4 26.0 -80.4 -63.3 0.5 -3.5 9.2 16 24 A T S S- 0 0 125 11,-0.0 -1,-0.1 1,-0.0 11,-0.0 0.847 111.3-114.6 -69.5 -35.0 -1.1 -0.4 10.6 17 25 A G S S+ 0 0 59 10,-0.1 3,-0.1 2,-0.1 10,-0.0 0.765 76.3 128.2 102.4 35.1 -4.6 -1.8 10.1 18 26 A N S S+ 0 0 123 1,-0.1 2,-0.3 -5,-0.0 -4,-0.0 0.543 72.5 38.6 -94.8 -11.6 -5.9 0.6 7.5 19 27 A Y - 0 0 122 1,-0.1 3,-0.1 8,-0.1 -1,-0.1 -0.961 54.9-157.9-138.9 154.8 -6.9 -2.2 5.1 20 28 A A S S+ 0 0 82 1,-0.4 2,-0.3 -2,-0.3 -1,-0.1 0.697 89.0 2.7 -99.3 -29.7 -8.5 -5.6 5.4 21 29 A S + 0 0 78 -9,-0.3 -1,-0.4 -11,-0.0 2,-0.3 -0.959 69.2 168.2-158.5 137.5 -7.1 -6.8 2.0 22 30 A H - 0 0 14 -11,-3.0 -18,-0.4 -2,-0.3 -3,-0.0 -0.884 30.2-144.4-143.3 174.5 -4.9 -5.2 -0.6 23 31 A R S S+ 0 0 102 -2,-0.3 -20,-0.4 -20,-0.2 2,-0.2 -0.117 74.0 62.2-135.7 36.5 -3.0 -6.1 -3.8 24 32 A S S S- 0 0 50 -20,-0.1 -20,-0.2 -22,-0.1 -2,-0.1 -0.821 95.5 -86.4-146.5-174.9 0.1 -3.8 -3.6 25 33 A L S S+ 0 0 118 -2,-0.2 2,-1.9 1,-0.1 3,-0.3 0.092 79.9 125.4 -87.2 22.7 3.2 -3.0 -1.6 26 34 A S S S- 0 0 68 1,-0.2 -1,-0.1 -12,-0.0 -2,-0.1 -0.520 98.2 -35.1 -84.5 72.3 1.1 -0.7 0.6 27 35 A G S S- 0 0 26 -2,-1.9 -12,-0.5 1,-0.1 -1,-0.2 0.965 75.7-152.1 78.7 58.1 1.9 -2.2 4.0 28 36 A C > - 0 0 11 -3,-0.3 3,-0.5 1,-0.1 -1,-0.1 -0.447 5.1-149.6 -65.1 124.3 2.2 -5.9 3.2 29 37 A P T 3 S+ 0 0 31 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.840 93.6 33.3 -63.6 -36.3 1.3 -8.0 6.3 30 38 A R T 3 0 0 126 -17,-0.1 -2,-0.0 -24,-0.1 -22,-0.0 -0.708 360.0 360.0-124.2 79.0 3.6 -10.8 5.3 31 39 A A < 0 0 122 -3,-0.5 -6,-0.0 -2,-0.4 -3,-0.0 -0.802 360.0 360.0 -99.5 360.0 6.6 -9.3 3.5