==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 07-NOV-07 2JX5 . COMPND 2 MOLECULE: GLUB(S27A); . SOURCE 2 ORGANISM_SCIENTIFIC: GIARDIA LAMBLIA ATCC 50803; . AUTHOR A.CATIC,Z.J.SUN,D.M.RATNER,S.MISAGHI,E.SPOONER,J.SAMUELSON, . 69 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5340.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 59.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 7.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 20.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 11.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 33 0, 0.0 15,-2.6 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 150.4 3.0 0.6 -3.3 2 2 A L E -A 15 0A 53 13,-0.2 53,-2.4 18,-0.0 2,-0.4 -0.693 360.0-169.8 -95.5 147.3 5.5 -2.2 -3.9 3 3 A V E -Ab 14 55A 1 11,-2.4 11,-1.4 -2,-0.3 2,-1.1 -0.956 14.7-150.3-141.7 119.6 9.2 -2.1 -3.0 4 4 A I E -Ab 13 56A 50 51,-2.5 53,-1.9 -2,-0.4 2,-0.5 -0.734 18.3-163.3 -91.5 95.0 11.9 -4.5 -4.0 5 5 A V E -Ab 12 57A 0 7,-1.3 7,-2.2 -2,-1.1 2,-0.6 -0.679 4.3-153.4 -82.2 121.4 14.4 -4.5 -1.2 6 6 A R E -Ab 11 58A 115 51,-2.8 53,-2.4 -2,-0.5 5,-0.3 -0.853 9.2-149.8 -99.8 119.1 17.8 -6.0 -2.2 7 7 A L E > -A 10 0A 53 3,-1.5 3,-1.6 -2,-0.6 53,-0.1 -0.331 42.4 -79.2 -80.9 166.1 19.8 -7.5 0.7 8 8 A Q T 3 S- 0 0 132 1,-0.3 -1,-0.0 -2,-0.1 -2,-0.0 0.818 125.6 -7.8 -26.9 -61.4 23.6 -7.7 0.8 9 9 A D T 3 S+ 0 0 142 2,-0.0 -1,-0.3 0, 0.0 2,-0.3 -0.193 129.4 65.6-136.4 42.3 23.5 -10.7 -1.5 10 10 A Q E < -A 7 0A 139 -3,-1.6 -3,-1.5 2,-0.0 2,-0.4 -0.949 64.4-129.7-154.1 171.1 19.8 -11.5 -1.7 11 11 A T E +A 6 0A 79 -2,-0.3 -5,-0.2 -5,-0.3 -7,-0.0 -0.994 24.5 164.0-134.0 137.1 16.4 -10.2 -3.0 12 12 A L E -A 5 0A 95 -7,-2.2 -7,-1.3 -2,-0.4 -2,-0.0 -0.901 26.8-134.1-156.1 121.8 13.1 -9.8 -1.2 13 13 A P E -A 4 0A 68 0, 0.0 2,-0.3 0, 0.0 -9,-0.2 -0.198 18.5-154.9 -69.8 163.8 10.0 -7.8 -2.1 14 14 A F E -A 3 0A 61 -11,-1.4 -11,-2.4 2,-0.0 2,-0.6 -0.996 11.7-133.8-146.3 137.5 8.0 -5.7 0.4 15 15 A E E -A 2 0A 173 -2,-0.3 -13,-0.2 -13,-0.2 -11,-0.0 -0.813 29.8-179.9 -95.3 120.5 4.4 -4.4 0.5 16 16 A L - 0 0 11 -15,-2.6 3,-0.1 -2,-0.6 4,-0.1 -0.792 27.6-100.7-117.6 160.9 4.0 -0.8 1.4 17 17 A P > - 0 0 56 0, 0.0 3,-1.6 0, 0.0 -1,-0.1 -0.062 57.7 -65.0 -69.7 175.4 1.0 1.5 1.8 18 18 A A T 3 S+ 0 0 97 1,-0.3 3,-0.1 35,-0.0 34,-0.0 -0.363 120.9 0.6 -64.9 140.0 -0.4 4.0 -0.8 19 19 A G T 3 S+ 0 0 48 -3,-0.1 -1,-0.3 1,-0.1 34,-0.0 0.753 96.7 175.2 52.5 24.2 2.0 6.8 -1.6 20 20 A A < - 0 0 2 -3,-1.6 2,-0.3 1,-0.1 -1,-0.1 0.085 11.2-158.1 -52.2 172.0 4.4 5.3 0.9 21 21 A R > - 0 0 106 29,-0.1 4,-2.1 -3,-0.1 29,-0.2 -0.901 38.8 -82.5-147.8 174.7 7.9 6.7 1.3 22 22 A A H > S+ 0 0 6 27,-2.9 4,-2.6 24,-0.4 5,-0.2 0.780 123.6 62.8 -52.1 -27.6 11.4 5.9 2.5 23 23 A S H > S+ 0 0 49 24,-0.8 4,-1.7 26,-0.3 -1,-0.2 0.989 105.5 39.6 -62.5 -62.8 10.0 6.6 6.0 24 24 A Q H > S+ 0 0 70 1,-0.2 4,-2.2 2,-0.2 3,-0.3 0.924 117.7 50.9 -53.3 -49.1 7.4 3.8 6.1 25 25 A L H X S+ 0 0 4 -4,-2.1 4,-2.3 1,-0.2 5,-0.3 0.951 106.8 52.4 -54.5 -54.7 9.7 1.4 4.4 26 26 A S H X S+ 0 0 61 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.829 109.1 53.5 -51.7 -33.8 12.6 2.1 6.8 27 27 A N H X S+ 0 0 104 -4,-1.7 4,-2.4 -3,-0.3 -1,-0.2 0.952 106.1 49.7 -67.4 -51.1 10.1 1.3 9.6 28 28 A L H X S+ 0 0 79 -4,-2.2 4,-0.6 1,-0.2 -2,-0.2 0.932 117.3 40.7 -53.4 -50.8 9.1 -2.1 8.2 29 29 A L H >< S+ 0 0 19 -4,-2.3 3,-0.8 1,-0.2 -1,-0.2 0.848 112.7 56.2 -67.4 -34.6 12.7 -3.2 7.8 30 30 A S H 3< S+ 0 0 72 -4,-2.0 -1,-0.2 -5,-0.3 -2,-0.2 0.843 93.0 69.4 -66.1 -34.0 13.6 -1.5 11.1 31 31 A S H 3< S+ 0 0 102 -4,-2.4 -1,-0.2 -5,-0.1 -2,-0.2 0.832 91.3 77.2 -53.2 -33.9 11.0 -3.6 12.9 32 32 A S S << S- 0 0 84 -3,-0.8 -3,-0.0 -4,-0.6 0, 0.0 -0.031 100.2-103.3 -69.2 178.3 13.2 -6.6 12.2 33 33 A G S S+ 0 0 84 2,-0.0 2,-0.1 0, 0.0 -1,-0.1 0.865 101.2 70.1 -73.5 -36.9 16.3 -7.5 14.2 34 34 A M - 0 0 132 -5,-0.1 2,-0.2 2,-0.0 -2,-0.1 -0.450 60.4-173.1 -81.3 155.5 18.7 -6.3 11.5 35 35 A A + 0 0 84 -2,-0.1 2,-0.2 -4,-0.1 -5,-0.1 -0.745 17.1 150.2-154.2 100.0 19.1 -2.6 10.6 36 36 A F - 0 0 37 -2,-0.2 25,-0.2 25,-0.1 2,-0.1 -0.701 49.5 -75.7-123.7 176.1 21.2 -1.4 7.7 37 37 A S E -C 60 0A 61 23,-1.9 23,-2.1 -2,-0.2 2,-0.4 -0.419 36.1-155.8 -73.7 147.9 21.2 1.5 5.2 38 38 A L E +C 59 0A 22 21,-0.3 7,-0.8 7,-0.1 2,-0.3 -0.864 24.2 158.0-130.6 98.7 18.7 1.6 2.4 39 39 A H E -CD 58 44A 48 19,-2.7 19,-1.8 -2,-0.4 2,-0.3 -0.899 19.3-159.1-121.5 150.3 19.6 3.6 -0.7 40 40 A T E > S+ D 0 43A 25 3,-2.0 3,-2.6 -2,-0.3 17,-0.1 -0.896 70.4 17.1-127.2 156.8 18.3 3.5 -4.3 41 41 A Q T 3 S- 0 0 173 -2,-0.3 -1,-0.1 1,-0.3 3,-0.1 0.774 130.3 -64.7 55.7 26.2 19.7 4.6 -7.6 42 42 A G T 3 S+ 0 0 73 1,-0.2 2,-0.3 -3,-0.2 -1,-0.3 0.662 120.3 100.3 72.3 15.3 23.1 4.8 -5.9 43 43 A R E < S-D 40 0A 185 -3,-2.6 -3,-2.0 0, 0.0 -1,-0.2 -0.985 78.5-104.3-135.4 144.9 21.7 7.6 -3.7 44 44 A V E -D 39 0A 121 -2,-0.3 2,-0.4 -5,-0.3 -5,-0.2 -0.272 36.3-120.0 -64.2 150.3 20.4 7.7 -0.1 45 45 A L - 0 0 33 -7,-0.8 2,-0.1 -23,-0.1 -7,-0.1 -0.793 21.9-129.7 -97.4 134.5 16.6 7.9 0.4 46 46 A S > - 0 0 64 -2,-0.4 3,-2.0 1,-0.1 -24,-0.4 -0.446 22.4-114.6 -79.9 153.8 15.1 10.9 2.3 47 47 A E T 3 S+ 0 0 166 1,-0.3 -24,-0.8 -25,-0.2 -23,-0.2 0.768 123.7 38.2 -57.2 -25.3 12.6 10.4 5.1 48 48 A A T 3 S+ 0 0 74 -26,-0.1 -1,-0.3 -25,-0.1 2,-0.2 0.296 87.5 131.6-107.3 6.2 10.1 12.1 2.9 49 49 A A < - 0 0 13 -3,-2.0 -27,-2.9 -28,-0.1 2,-0.5 -0.436 32.9-176.6 -64.2 124.5 11.3 10.4 -0.3 50 50 A E + 0 0 132 -29,-0.2 -29,-0.1 -2,-0.2 -1,-0.1 -0.873 12.1 164.1-129.9 99.6 8.4 8.9 -2.2 51 51 A L - 0 0 62 -2,-0.5 2,-0.3 1,-0.2 -1,-0.1 0.939 40.9-108.7 -74.8 -90.2 9.3 7.0 -5.4 52 52 A N - 0 0 116 -50,-0.2 3,-0.5 -34,-0.0 -1,-0.2 -0.968 42.7 -40.1 177.8-168.5 6.3 4.9 -6.5 53 53 A D S S+ 0 0 89 -2,-0.3 -50,-0.1 1,-0.2 -35,-0.0 -0.471 115.9 20.9 -79.6 151.0 4.9 1.4 -6.9 54 54 A K S S+ 0 0 158 -2,-0.1 -1,-0.2 1,-0.1 -51,-0.2 0.919 91.7 154.4 58.8 45.9 7.1 -1.6 -8.0 55 55 A M E -b 3 0A 16 -53,-2.4 -51,-2.5 -3,-0.5 2,-0.4 -0.256 38.5-126.9 -93.6-175.9 10.3 0.3 -6.9 56 56 A V E -b 4 0A 69 -53,-0.2 2,-0.5 -2,-0.1 -15,-0.2 -0.980 16.6-170.0-141.1 125.8 13.7 -1.0 -5.9 57 57 A I E -b 5 0A 0 -53,-1.9 -51,-2.8 -2,-0.4 2,-0.7 -0.963 16.6-141.4-119.6 126.0 15.7 -0.2 -2.8 58 58 A D E -bC 6 39A 64 -19,-1.8 -19,-2.7 -2,-0.5 2,-0.7 -0.751 14.5-154.2 -88.0 114.8 19.3 -1.2 -2.3 59 59 A A E - C 0 38A 1 -53,-2.4 2,-0.5 -2,-0.7 -21,-0.3 -0.799 10.9-169.8 -93.2 113.5 20.0 -2.3 1.3 60 60 A F E - C 0 37A 94 -23,-2.1 -23,-1.9 -2,-0.7 -53,-0.1 -0.905 6.4-154.0-107.6 123.5 23.7 -1.8 2.3 61 61 A V - 0 0 43 -2,-0.5 2,-0.1 -25,-0.2 -25,-0.1 -0.639 26.4 -98.9 -95.1 152.3 24.9 -3.3 5.5 62 62 A P - 0 0 101 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.419 43.7-175.6 -69.8 139.9 27.9 -2.0 7.6 63 63 A A > - 0 0 66 3,-0.2 3,-1.3 -2,-0.1 2,-0.3 -0.800 34.7 -76.5-130.6 172.6 31.2 -3.8 7.2 64 64 A D T 3 S+ 0 0 169 1,-0.3 0, 0.0 -2,-0.3 0, 0.0 -0.548 116.0 3.1 -73.7 128.8 34.7 -3.8 8.7 65 65 A G T 3 S- 0 0 77 -2,-0.3 2,-2.2 1,-0.1 -1,-0.3 0.752 109.7 -99.7 68.5 23.6 36.8 -0.9 7.4 66 66 A A S < S- 0 0 85 -3,-1.3 -3,-0.2 1,-0.1 -1,-0.1 -0.416 70.2 -69.1 66.5 -81.5 33.8 0.4 5.4 67 67 A G - 0 0 43 -2,-2.2 -1,-0.1 2,-0.1 -2,-0.1 -0.165 35.3-159.9 153.7 108.5 34.9 -1.1 2.1 68 68 A L 0 0 183 -2,-0.1 -3,-0.0 1,-0.0 -2,-0.0 0.999 360.0 360.0 -64.3 -69.8 37.8 -0.3 -0.3 69 69 A E 0 0 213 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 0.979 360.0 360.0 -52.2 360.0 36.5 -1.9 -3.5