==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 09-NOV-07 2JX8 . COMPND 2 MOLECULE: PHOSPHORYLATED CTD-INTERACTING FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.KOUNO,Y.IWAMOTO,Y.HIROSE,T.AIZAWA,M.DEMURA,K.KAWANO, . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4316.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 48.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 19.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A L 0 0 64 0, 0.0 11,-0.1 0, 0.0 34,-0.0 0.000 360.0 360.0 360.0 97.3 -8.8 -2.1 2.8 2 2 A P >> - 0 0 71 0, 0.0 4,-2.0 0, 0.0 3,-1.1 -0.192 360.0 -87.7 -73.1 169.1 -9.1 1.7 2.8 3 3 A E H 3> S+ 0 0 144 1,-0.3 4,-1.7 2,-0.2 5,-0.2 0.801 125.2 71.3 -50.4 -24.9 -7.8 3.8 -0.1 4 4 A E H 3> S+ 0 0 76 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.965 106.6 32.3 -58.5 -51.4 -4.4 3.7 1.7 5 5 A L H <>>S+ 0 0 8 -3,-1.1 4,-1.7 1,-0.2 5,-1.6 0.941 115.8 56.7 -72.8 -45.8 -3.9 -0.0 0.9 6 6 A V H <5S+ 0 0 63 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.821 100.7 63.0 -56.0 -26.3 -5.7 0.1 -2.5 7 7 A H H <5S+ 0 0 131 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.958 102.6 45.8 -65.2 -48.3 -3.2 2.9 -3.4 8 8 A A H <5S- 0 0 37 -4,-1.0 -1,-0.2 -3,-0.5 -2,-0.2 0.842 127.9 -98.8 -64.8 -29.5 -0.2 0.6 -3.1 9 9 A G T <5S+ 0 0 0 -4,-1.7 17,-2.3 1,-0.2 -3,-0.2 0.386 70.8 150.7 125.4 1.0 -2.1 -2.0 -5.1 10 10 A W < + 0 0 22 -5,-1.6 2,-0.3 15,-0.3 -1,-0.2 -0.333 17.6 177.0 -63.8 144.6 -3.3 -4.3 -2.3 11 11 A E - 0 0 67 13,-0.5 13,-1.7 2,-0.0 2,-0.2 -0.932 27.6-126.7-153.3 125.9 -6.6 -6.1 -3.1 12 12 A K E +A 23 0A 125 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.488 41.3 158.5 -72.9 139.3 -8.6 -8.7 -1.1 13 13 A C E -A 22 0A 43 9,-0.9 9,-1.9 -2,-0.2 2,-0.7 -0.921 44.3-102.3-150.2 175.7 -9.4 -11.9 -3.0 14 14 A W E -A 21 0A 151 -2,-0.3 2,-0.4 7,-0.2 5,-0.1 -0.856 30.1-151.6-110.0 103.6 -10.4 -15.6 -2.4 15 15 A S E >> -A 20 0A 26 5,-1.9 5,-1.8 -2,-0.7 4,-0.9 -0.567 1.0-158.4 -73.8 124.5 -7.4 -17.9 -2.9 16 16 A R T 45S+ 0 0 190 -2,-0.4 3,-0.4 3,-0.2 -1,-0.2 0.953 90.2 53.8 -69.3 -47.7 -8.7 -21.4 -4.0 17 17 A R T 45S+ 0 0 205 1,-0.3 -1,-0.2 2,-0.1 -2,-0.1 0.936 117.6 37.0 -53.1 -46.9 -5.6 -23.3 -2.9 18 18 A E T 45S- 0 0 86 2,-0.2 -1,-0.3 1,-0.0 -2,-0.2 0.653 104.4-136.4 -80.8 -13.0 -5.9 -21.8 0.6 19 19 A N T <5S+ 0 0 114 -4,-0.9 -3,-0.2 -3,-0.4 -2,-0.1 0.958 71.4 69.1 58.6 50.3 -9.7 -22.0 0.4 20 20 A R E > - B 0 30A 7 5,-1.2 4,-1.4 -2,-0.4 5,-0.6 -0.609 10.0-168.4 -77.8 101.1 -0.5 -6.8 -4.1 26 26 A R T 45S+ 0 0 157 -17,-2.3 -1,-0.2 -2,-1.1 -16,-0.1 0.672 86.8 56.8 -64.1 -10.9 -1.2 -6.4 -7.8 27 27 A F T 45S+ 0 0 166 1,-0.1 -1,-0.2 -19,-0.1 -18,-0.1 0.937 124.6 15.6 -85.4 -53.7 1.8 -4.1 -7.8 28 28 A T T 45S- 0 0 79 2,-0.0 -2,-0.2 0, 0.0 -1,-0.1 0.223 100.5-119.8-104.2 15.3 4.5 -6.5 -6.4 29 29 A N T <5 + 0 0 112 -4,-1.4 -3,-0.2 1,-0.1 0, 0.0 0.721 59.3 162.1 56.6 15.8 2.4 -9.6 -7.0 30 30 A Q E < -B 25 0A 88 -5,-0.6 -5,-1.2 -6,-0.1 2,-0.3 -0.192 28.2-156.9 -62.9 160.6 2.7 -10.1 -3.3 31 31 A S E +B 24 0A 69 -7,-0.2 -7,-0.2 -3,-0.1 2,-0.1 -0.775 20.1 165.6-144.0 95.5 0.2 -12.5 -1.6 32 32 A L E -B 23 0A 54 -9,-1.6 -9,-1.2 -2,-0.3 3,-0.1 -0.196 34.6-139.4 -96.9-166.4 -0.4 -12.1 2.1 33 33 A W S S+ 0 0 109 1,-0.3 2,-0.3 -11,-0.2 -1,-0.1 0.276 81.8 42.7-137.5 4.8 -3.2 -13.5 4.4 34 34 A E S S- 0 0 151 -11,-0.1 -1,-0.3 0, 0.0 -11,-0.1 -0.993 102.8 -73.3-152.8 144.6 -4.0 -10.4 6.6 35 35 A M - 0 0 84 -2,-0.3 -2,-0.1 -3,-0.1 -12,-0.1 -0.081 55.6-140.3 -39.5 127.2 -4.4 -6.7 6.0 36 36 A P - 0 0 20 0, 0.0 2,-0.2 0, 0.0 -31,-0.1 0.033 13.5-115.1 -79.6-167.9 -0.9 -5.3 5.3 37 37 A V - 0 0 109 -32,-0.1 2,-0.2 -33,-0.0 0, 0.0 -0.679 23.6-167.3-124.3-179.4 0.4 -1.9 6.5 38 38 A L > - 0 0 61 -2,-0.2 3,-0.9 -30,-0.0 -33,-0.1 -0.733 51.5 -64.4-148.8-161.5 1.6 1.3 4.9 39 39 A G T 3 S+ 0 0 55 1,-0.2 -2,-0.0 -2,-0.2 -35,-0.0 0.503 92.6 113.6 -76.1 0.8 3.4 4.6 5.6 40 40 A Q T 3 + 0 0 143 3,-0.0 -1,-0.2 -36,-0.0 3,-0.1 0.800 65.5 76.8 -43.1 -26.1 0.6 5.4 8.0 41 41 A H S < S- 0 0 145 -3,-0.9 -2,-0.0 1,-0.2 2,-0.0 0.299 106.6 -52.0 -66.6-154.3 3.3 5.1 10.7 42 42 A D - 0 0 124 1,-0.1 2,-0.7 2,-0.0 -1,-0.2 -0.226 53.3-113.8 -77.7 173.9 5.9 7.8 11.3 43 43 A V - 0 0 125 -3,-0.1 2,-2.0 2,-0.1 -1,-0.1 -0.782 27.5-175.8-113.4 91.1 8.0 9.3 8.5 44 44 A I + 0 0 165 -2,-0.7 2,-0.4 2,-0.0 -1,-0.0 -0.423 42.8 120.0 -83.1 68.3 11.7 8.4 9.0 45 45 A S - 0 0 88 -2,-2.0 -2,-0.1 2,-0.0 0, 0.0 -0.981 38.9-177.7-133.2 144.7 13.0 10.5 6.1 46 46 A D 0 0 155 -2,-0.4 -2,-0.0 0, 0.0 -1,-0.0 -0.330 360.0 360.0-137.8 56.7 15.5 13.4 5.9 47 47 A P 0 0 171 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.297 360.0 360.0 -72.7 360.0 15.6 14.5 2.3