==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 06-DEC-07 2JY5 . COMPND 2 MOLECULE: UBIQUILIN-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.ZHANG,S.RAASI,D.FUSHMAN . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3712.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 48.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 536 A G 0 0 128 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -75.8 -20.7 18.5 2.7 2 537 A S + 0 0 118 2,-0.0 2,-0.0 0, 0.0 0, 0.0 -0.414 360.0 166.6-158.2 72.3 -22.7 15.6 1.3 3 538 A P - 0 0 83 0, 0.0 2,-0.6 0, 0.0 3,-0.0 -0.115 43.2 -92.1 -80.0-178.3 -21.4 14.1 -2.0 4 539 A E > - 0 0 95 1,-0.1 3,-1.0 -2,-0.0 6,-0.3 -0.884 18.7-150.5-103.8 117.7 -22.4 10.9 -3.7 5 540 A F T 3 S+ 0 0 115 -2,-0.6 6,-0.1 1,-0.2 7,-0.1 0.630 89.9 79.0 -58.4 -12.3 -20.2 7.8 -2.7 6 541 A Q T 3 S+ 0 0 149 5,-0.1 -1,-0.2 2,-0.1 29,-0.1 0.956 72.1 85.3 -61.5 -53.1 -21.1 6.6 -6.2 7 542 A N S <> S- 0 0 48 -3,-1.0 4,-0.9 1,-0.2 3,-0.4 -0.205 77.9-137.4 -53.0 137.1 -18.6 8.8 -8.1 8 543 A P T 4 S+ 0 0 65 0, 0.0 -1,-0.2 0, 0.0 23,-0.1 0.378 92.6 81.5 -78.7 5.2 -15.1 7.2 -8.2 9 544 A E T 4 S+ 0 0 120 1,-0.1 -4,-0.1 2,-0.1 -2,-0.0 0.956 96.3 37.8 -73.5 -54.2 -13.6 10.6 -7.4 10 545 A V T >4 S- 0 0 16 -3,-0.4 3,-1.4 -6,-0.3 6,-0.1 0.900 91.8-157.5 -61.5 -40.3 -14.2 10.4 -3.7 11 546 A R T 3< - 0 0 81 -4,-0.9 5,-0.3 1,-0.3 -1,-0.1 0.777 69.9 -62.9 65.1 30.3 -13.3 6.7 -4.0 12 547 A F T >> S- 0 0 38 -5,-0.4 3,-2.4 3,-0.2 4,-0.7 0.748 75.3-142.3 64.0 18.2 -15.2 6.2 -0.8 13 548 A Q H <> S+ 0 0 115 -3,-1.4 4,-1.6 1,-0.3 -1,-0.1 0.142 88.5 27.4 29.9 -78.7 -12.4 8.5 0.5 14 549 A Q H 3> S+ 0 0 125 2,-0.2 4,-1.3 1,-0.2 -1,-0.3 0.944 122.5 51.4 -71.4 -50.8 -11.9 6.9 3.9 15 550 A Q H X> S+ 0 0 39 -3,-2.4 4,-1.8 1,-0.3 3,-0.6 0.894 111.2 51.1 -52.1 -40.7 -13.0 3.5 2.9 16 551 A L H 3X S+ 0 0 28 -4,-0.7 4,-3.2 -5,-0.3 5,-0.4 0.887 98.9 64.3 -62.6 -40.7 -10.5 3.9 0.0 17 552 A E H 3X S+ 0 0 105 -4,-1.6 4,-1.4 -5,-0.3 -1,-0.2 0.824 105.3 47.9 -53.6 -32.1 -7.9 4.8 2.6 18 553 A Q H S+ 0 0 0 -4,-1.8 5,-0.5 1,-0.3 3,-0.5 0.885 120.1 49.6 -57.8 -32.4 -8.1 -0.8 0.6 20 555 A S H >X5S+ 0 0 23 -4,-3.2 3,-1.8 1,-0.2 4,-0.9 0.894 101.0 63.4 -68.9 -40.2 -5.4 1.6 -0.4 21 556 A A H 3<5S+ 0 0 67 -4,-1.4 -1,-0.2 -5,-0.4 -2,-0.2 0.759 94.4 61.4 -55.3 -27.2 -3.7 1.1 3.0 22 557 A M T 3<5S- 0 0 115 -4,-1.2 -1,-0.3 -3,-0.5 -2,-0.1 0.107 133.2 -88.4 -89.3 25.0 -3.2 -2.6 2.0 23 558 A G T <45S+ 0 0 66 -3,-1.8 2,-0.5 1,-0.2 -2,-0.2 0.872 76.1 152.9 75.6 39.9 -1.0 -1.5 -0.9 24 559 A F << + 0 0 38 -4,-0.9 -1,-0.2 -5,-0.5 -2,-0.0 -0.896 23.6 178.2-104.4 126.9 -3.7 -1.0 -3.6 25 560 A L + 0 0 145 -2,-0.5 2,-2.0 1,-0.1 3,-0.2 0.635 63.2 92.9 -96.3 -18.8 -3.1 1.5 -6.4 26 561 A N > + 0 0 93 1,-0.2 4,-0.8 2,-0.1 -1,-0.1 -0.553 51.9 171.3 -77.2 82.2 -6.3 0.7 -8.1 27 562 A R H >> S+ 0 0 87 -2,-2.0 4,-1.9 1,-0.2 3,-1.8 0.936 74.5 52.1 -59.9 -53.5 -8.3 3.4 -6.4 28 563 A E H 3> S+ 0 0 94 1,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.838 107.0 57.0 -52.3 -31.8 -11.4 3.1 -8.5 29 564 A A H 3> S+ 0 0 16 2,-0.2 4,-1.7 1,-0.2 -1,-0.3 0.730 104.3 52.2 -73.5 -23.2 -11.3 -0.6 -7.6 30 565 A N H S+ 0 0 0 -4,-2.6 5,-1.3 2,-0.2 4,-0.5 0.867 107.4 52.8 -73.8 -37.4 -16.2 -1.1 -0.7 35 570 A I H ><5S+ 0 0 92 -4,-1.7 3,-0.5 1,-0.2 -2,-0.2 0.875 113.1 44.0 -65.4 -38.6 -19.7 -0.6 -2.2 36 571 A A H 3<5S+ 0 0 74 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.640 115.8 49.1 -81.1 -15.5 -20.1 -4.4 -2.8 37 572 A T H ><5S- 0 0 24 -4,-0.8 3,-2.7 -5,-0.2 -1,-0.2 0.369 98.2-134.9-104.9 4.6 -18.7 -5.1 0.7 38 573 A G T <<5S- 0 0 72 -3,-0.5 -3,-0.2 -4,-0.5 -4,-0.1 0.776 81.6 -37.3 47.4 32.0 -20.9 -2.7 2.6 39 574 A G T 3 + 0 0 105 -3,-2.7 4,-1.6 -6,-0.2 -1,-0.2 -0.509 25.2 164.0 -75.3 78.8 -16.2 -4.9 4.9 41 576 A I H > S+ 0 0 14 -2,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.847 73.0 53.5 -67.5 -33.9 -12.9 -3.5 3.6 42 577 A N H > S+ 0 0 117 2,-0.3 4,-1.8 -3,-0.2 -1,-0.2 0.917 109.3 46.9 -66.3 -46.7 -11.1 -6.6 4.9 43 578 A A H > S+ 0 0 43 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.832 113.4 52.3 -62.6 -31.0 -13.5 -8.8 3.1 44 579 A A H X S+ 0 0 0 -4,-1.6 4,-3.2 2,-0.2 -2,-0.3 0.820 102.2 57.7 -74.3 -33.9 -12.9 -6.5 0.1 45 580 A I H X S+ 0 0 26 -4,-2.0 4,-1.9 1,-0.2 -2,-0.2 0.917 110.1 43.8 -62.8 -44.0 -9.1 -6.9 0.4 46 581 A E H < S+ 0 0 144 -4,-1.8 4,-0.4 2,-0.2 -1,-0.2 0.863 120.5 40.5 -68.9 -39.2 -9.3 -10.6 0.0 47 582 A R H X S+ 0 0 158 -4,-1.5 4,-1.2 -5,-0.2 5,-0.3 0.883 113.8 52.9 -77.4 -40.8 -11.8 -10.4 -2.8 48 583 A L H < S+ 0 0 8 -4,-3.2 -2,-0.2 1,-0.3 -3,-0.2 0.899 108.4 48.8 -62.5 -44.6 -10.2 -7.5 -4.6 49 584 A L T < S+ 0 0 117 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.712 102.7 71.8 -69.1 -19.0 -6.8 -9.1 -4.7 50 585 A G T 4 S- 0 0 48 -4,-0.4 -2,-0.2 -3,-0.2 -1,-0.2 0.994 125.4 -67.3 -58.4 -73.8 -8.6 -12.1 -6.1 51 586 A S < 0 0 122 -4,-1.2 -3,-0.1 1,-0.2 -4,-0.1 0.337 360.0 360.0-147.6 -61.5 -9.6 -10.9 -9.5 52 587 A S 0 0 86 -5,-0.3 -2,-0.2 -19,-0.0 -1,-0.2 -0.565 360.0 360.0 -71.9 360.0 -12.1 -8.0 -9.6