==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 13-DEC-07 2JYE . COMPND 2 MOLECULE: GRANULIN A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.TOLKATCHEV,P.WANG,Z.CHEN,P.XU,F.NI . 72 1 6 6 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5873.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 34.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 9.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 108 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -11.2 20.6 -3.9 -1.7 2 2 A M + 0 0 158 1,-0.1 3,-0.1 10,-0.1 10,-0.1 -0.012 360.0 107.5-118.8 27.0 20.3 -1.1 -4.2 3 3 A D S S+ 0 0 123 1,-0.2 2,-0.4 8,-0.0 -1,-0.1 0.900 86.0 27.3 -70.7 -42.1 18.5 -3.1 -6.9 4 4 A V + 0 0 62 -3,-0.1 8,-0.6 10,-0.1 2,-0.3 -0.955 67.6 175.8-125.7 143.4 15.2 -1.3 -6.3 5 5 A K - 0 0 120 -2,-0.4 6,-0.1 6,-0.2 3,-0.1 -0.998 23.4-165.7-147.0 142.4 14.5 2.2 -5.0 6 6 A a S S- 0 0 24 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.742 78.1 -18.4 -95.9 -29.8 11.3 4.3 -4.5 7 7 A D S > S- 0 0 89 3,-0.1 3,-0.7 19,-0.0 2,-0.5 -0.873 81.8 -74.6-158.2-171.8 13.1 7.6 -4.0 8 8 A M T 3 S+ 0 0 175 -2,-0.2 3,-0.1 1,-0.2 -3,-0.0 -0.254 124.4 43.0 -92.7 46.3 16.4 9.3 -3.1 9 9 A E T 3 S+ 0 0 178 -2,-0.5 2,-0.3 1,-0.2 -1,-0.2 0.286 101.8 70.9-164.9 -1.5 16.1 8.4 0.6 10 10 A V < - 0 0 22 -3,-0.7 2,-0.2 17,-0.0 -1,-0.2 -0.798 52.2-160.5-123.6 166.2 14.9 4.8 0.6 11 11 A S + 0 0 74 -2,-0.3 -6,-0.2 -6,-0.1 17,-0.1 -0.654 24.1 152.4-151.4 88.9 16.3 1.3 -0.2 12 12 A b + 0 0 0 -8,-0.6 3,-0.1 -2,-0.2 4,-0.1 -0.844 20.1 176.4-122.2 92.6 13.9 -1.5 -0.8 13 13 A P > - 0 0 13 0, 0.0 3,-2.2 0, 0.0 -2,-0.0 0.261 48.9 -21.7 -75.5-156.6 15.5 -4.2 -3.2 14 14 A D T 3 S+ 0 0 111 1,-0.3 3,-0.1 16,-0.1 -10,-0.1 -0.176 133.1 26.0 -52.4 140.5 14.1 -7.5 -4.4 15 15 A G T 3 S+ 0 0 44 1,-0.3 16,-0.5 -3,-0.1 2,-0.3 0.284 106.1 103.2 86.4 -11.7 11.5 -8.9 -2.1 16 16 A Y < - 0 0 107 -3,-2.2 2,-0.3 14,-0.3 -1,-0.3 -0.730 58.4-148.7-105.2 154.9 10.6 -5.4 -1.0 17 17 A T - 0 0 30 12,-0.5 12,-2.0 -2,-0.3 2,-0.7 -0.911 12.6-130.5-122.4 149.1 7.7 -3.2 -2.0 18 18 A a E +A 28 0A 45 -2,-0.3 2,-0.4 10,-0.2 10,-0.2 -0.869 33.8 167.2-103.8 108.9 7.5 0.6 -2.3 19 19 A c E -A 27 0A 11 8,-2.2 8,-1.4 -2,-0.7 2,-0.1 -0.980 30.4-128.2-125.2 130.5 4.4 2.0 -0.5 20 20 A R E -A 26 0A 140 -2,-0.4 37,-0.3 6,-0.2 2,-0.2 -0.464 30.6-180.0 -75.5 145.6 3.8 5.7 0.2 21 21 A L - 0 0 48 4,-1.8 4,-0.4 -2,-0.1 3,-0.3 -0.790 43.2-105.3-135.7 177.9 3.0 6.8 3.8 22 22 A Q S S+ 0 0 167 -2,-0.2 4,-0.1 1,-0.2 2,-0.1 0.519 97.4 94.4 -84.6 -5.3 2.2 10.0 5.7 23 23 A S S S- 0 0 108 2,-0.2 -1,-0.2 1,-0.1 3,-0.1 0.123 109.7-107.4 -73.2 25.7 5.6 9.9 7.3 24 24 A G S S+ 0 0 67 -3,-0.3 2,-0.3 1,-0.2 -2,-0.1 0.814 94.9 64.0 51.8 32.7 6.6 12.2 4.5 25 25 A A S S- 0 0 41 -4,-0.4 -4,-1.8 -6,-0.0 -2,-0.2 -0.904 86.2 -82.0-161.7-172.7 8.5 9.3 2.9 26 26 A W E -A 20 0A 78 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.519 32.6-133.5-101.5 171.2 8.2 5.8 1.3 27 27 A G E -A 19 0A 10 -8,-1.4 -8,-2.2 -2,-0.2 2,-0.6 -0.983 3.9-142.4-131.2 140.6 8.0 2.4 2.9 28 28 A b E -A 18 0A 47 -2,-0.4 -10,-0.2 -10,-0.2 -12,-0.0 -0.886 13.3-167.1-104.5 116.1 9.8 -0.9 2.2 29 29 A d - 0 0 6 -12,-2.0 2,-2.1 -2,-0.6 -12,-0.5 -0.879 9.8-155.1-105.3 106.5 7.6 -4.0 2.5 30 30 A P + 0 0 93 0, 0.0 -14,-0.3 0, 0.0 2,-0.3 -0.408 63.1 81.9 -78.8 65.4 9.8 -7.3 2.5 31 31 A F S S- 0 0 23 -2,-2.1 2,-0.4 -16,-0.5 -2,-0.1 -0.948 71.3-124.5-156.4 173.2 7.0 -9.6 1.2 32 32 A T S S+ 0 0 125 -2,-0.3 2,-0.3 2,-0.0 -16,-0.0 -0.803 70.1 58.1-132.7 92.3 5.3 -10.8 -2.0 33 33 A Q S S- 0 0 139 -2,-0.4 2,-1.0 8,-0.1 -2,-0.1 -0.913 96.0 -2.9-178.0-157.3 1.5 -10.3 -2.0 34 34 A A S > S- 0 0 41 -2,-0.3 3,-1.2 1,-0.1 2,-0.2 -0.370 73.4-144.1 -58.2 95.2 -1.3 -7.8 -1.7 35 35 A V T 3 S- 0 0 42 -2,-1.0 7,-0.1 1,-0.3 3,-0.1 -0.436 74.2 -7.2 -67.8 133.4 0.8 -4.7 -1.0 36 36 A c T 3 S+ 0 0 3 5,-0.2 2,-0.3 -2,-0.2 -1,-0.3 0.873 123.6 86.5 47.6 44.1 -0.6 -2.2 1.4 37 37 A e S < S+ 0 0 16 -3,-1.2 4,-0.2 4,-0.2 -1,-0.2 -0.984 70.3 12.8-162.4 164.1 -3.9 -4.1 1.4 38 38 A E S S- 0 0 150 -2,-0.3 25,-0.0 -3,-0.1 -1,-0.0 -0.002 88.1 -68.4 57.2-168.0 -5.7 -7.0 3.0 39 39 A D S S+ 0 0 127 2,-0.1 2,-1.2 -3,-0.0 -2,-0.2 0.280 98.9 67.0 -92.3-140.6 -4.4 -8.6 6.3 40 40 A H S S- 0 0 153 1,-0.1 2,-0.4 2,-0.0 -2,-0.1 -0.436 118.5 -3.2 62.9 -95.3 -1.3 -10.7 6.8 41 41 A I S S- 0 0 87 -2,-1.2 2,-0.4 -4,-0.2 -5,-0.2 -0.895 71.6-178.0-135.0 105.0 1.4 -8.0 6.2 42 42 A H - 0 0 66 -2,-0.4 -7,-0.1 2,-0.2 4,-0.1 -0.852 29.4-141.3-105.3 137.2 0.3 -4.5 5.1 43 43 A d S S+ 0 0 22 -2,-0.4 -1,-0.1 2,-0.1 -24,-0.1 0.495 82.8 90.5 -71.2 -1.4 2.8 -1.8 4.4 44 44 A f S S- 0 0 8 4,-0.1 2,-1.6 1,-0.1 -2,-0.2 -0.718 92.8-114.6 -97.7 146.8 0.4 0.5 6.1 45 45 A P - 0 0 89 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.008 67.9 -97.0 -69.1 34.7 0.4 1.3 9.8 46 46 A A S S+ 0 0 50 -2,-1.6 13,-0.1 2,-0.1 3,-0.1 0.284 105.2 73.3 66.3 161.4 -3.0 -0.5 10.1 47 47 A G S S+ 0 0 62 1,-0.2 13,-0.5 -3,-0.1 2,-0.4 0.486 83.4 100.5 78.5 1.8 -6.4 1.2 10.1 48 48 A F - 0 0 49 11,-0.2 2,-0.3 10,-0.1 -1,-0.2 -0.956 56.3-156.1-123.8 141.2 -6.0 1.8 6.4 49 49 A T - 0 0 32 10,-1.8 9,-1.6 -2,-0.4 2,-0.4 -0.731 29.8 -98.0-111.1 161.3 -7.4 -0.0 3.4 50 50 A e E +B 57 0B 5 -2,-0.3 14,-2.2 7,-0.2 12,-0.2 -0.656 46.9 175.0 -83.2 128.8 -6.1 -0.2 -0.2 51 51 A D E >>> +B 56 0B 19 5,-1.4 4,-2.0 -2,-0.4 5,-1.8 -0.644 52.2 49.0-122.5 180.0 -7.8 2.1 -2.7 52 52 A T T 345S- 0 0 94 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 0.602 111.4 -93.5 63.3 11.0 -7.5 3.1 -6.3 53 53 A Q T 345S+ 0 0 124 -3,-0.2 -1,-0.3 1,-0.1 -2,-0.1 0.655 120.6 85.9 57.5 14.0 -7.4 -0.6 -7.0 54 54 A K T <45S- 0 0 164 -3,-1.6 -2,-0.2 -18,-0.1 -19,-0.1 0.723 111.3 -89.2-110.0 -38.0 -3.6 -0.2 -6.8 55 55 A G T <5 + 0 0 8 -4,-2.0 2,-0.7 1,-0.1 -3,-0.1 0.628 61.0 161.4 128.3 40.8 -3.0 -0.5 -3.1 56 56 A T E < -B 51 0B 45 -5,-1.8 -5,-1.4 -37,-0.1 2,-0.7 -0.803 28.3-148.1 -93.5 113.1 -3.3 2.9 -1.5 57 57 A f E +B 50 0B 28 -2,-0.7 -7,-0.2 -37,-0.3 2,-0.1 -0.708 38.3 141.7 -84.4 115.8 -3.8 2.6 2.3 58 58 A E - 0 0 98 -9,-1.6 -10,-0.1 -2,-0.7 -11,-0.1 -0.541 65.3 -57.0-156.6 82.3 -5.9 5.5 3.6 59 59 A Q S S- 0 0 123 -13,-0.1 -10,-1.8 -2,-0.1 -1,-0.6 0.269 88.7 -41.0 63.2 164.5 -8.4 4.7 6.3 60 60 A K S S+ 0 0 172 -13,-0.5 -12,-0.1 -12,-0.2 -3,-0.0 -0.337 74.9 135.3 -61.2 135.6 -11.2 2.1 6.1 61 61 A L S S- 0 0 104 -11,-0.1 -1,-0.2 -2,-0.0 -10,-0.1 0.290 73.1 -70.4-141.9 -82.2 -12.9 2.0 2.7 62 62 A A - 0 0 53 -12,-0.2 -11,-0.1 3,-0.0 -2,-0.1 0.308 60.7-113.3-166.7 -10.7 -13.7 -1.2 0.9 63 63 A A S S+ 0 0 37 -13,-0.2 -12,-0.2 2,-0.1 -26,-0.1 0.857 92.5 9.9 64.3 109.3 -10.4 -2.6 -0.3 64 64 A A S S- 0 0 51 -14,-2.2 2,-0.5 1,-0.2 -13,-0.1 0.990 84.3-149.5 55.9 72.7 -9.9 -2.7 -4.0 65 65 A L + 0 0 63 -15,-0.2 -1,-0.2 1,-0.2 -2,-0.1 -0.618 35.1 155.7 -77.2 121.4 -13.0 -0.7 -5.1 66 66 A E + 0 0 155 -2,-0.5 -1,-0.2 -14,-0.0 2,-0.1 0.481 56.4 67.4-119.6 -13.3 -14.3 -1.7 -8.5 67 67 A H - 0 0 96 1,-0.1 3,-0.1 2,-0.0 -2,-0.0 -0.372 61.2-152.4-100.6-178.3 -17.9 -0.6 -8.1 68 68 A H S S+ 0 0 172 1,-0.3 2,-0.3 -2,-0.1 -1,-0.1 0.691 74.9 50.6-119.3 -59.9 -19.5 2.8 -7.8 69 69 A H + 0 0 150 2,-0.0 -1,-0.3 0, 0.0 2,-0.3 -0.663 64.6 156.5 -88.2 140.3 -22.8 2.6 -5.9 70 70 A H - 0 0 110 -2,-0.3 2,-0.5 -3,-0.1 0, 0.0 -0.976 28.8-152.3-161.8 148.0 -22.8 0.9 -2.5 71 71 A H 0 0 175 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.942 360.0 360.0-130.7 110.9 -24.9 0.9 0.8 72 72 A H 0 0 244 -2,-0.5 -1,-0.1 0, 0.0 0, 0.0 0.641 360.0 360.0-126.0 360.0 -23.2 -0.1 4.1