==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 14-DEC-07 2JYO . COMPND 2 MOLECULE: C-C MOTIF CHEMOKINE 20 (SMALL-INDUCIBLE CYTOKINE . SOURCE 2 SYNTHETIC: YES . AUTHOR D.I.CHAN,H.N.HUNTER,B.F.TACK,H.J.VOGEL . 70 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5355.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 55.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 18.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 15.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 147 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 176.8 18.7 5.2 5.8 2 2 A S - 0 0 79 1,-0.2 29,-0.2 29,-0.1 3,-0.1 -0.661 360.0-150.9 -80.0 129.2 15.5 3.3 5.2 3 3 A N S S- 0 0 147 27,-0.6 2,-0.3 -2,-0.4 -1,-0.2 0.970 77.2 -6.6 -62.3 -55.1 12.5 4.8 7.0 4 4 A F - 0 0 70 26,-0.1 2,-0.4 -3,-0.1 -1,-0.1 -0.805 64.4-126.8-131.7 175.5 10.7 1.5 7.3 5 5 A D - 0 0 102 -2,-0.3 3,-0.2 27,-0.1 27,-0.0 -0.926 31.0-131.9-131.9 103.9 11.1 -2.0 6.0 6 6 A a - 0 0 1 -2,-0.4 27,-0.2 28,-0.2 28,-0.1 0.021 43.9 -68.0 -50.9 157.6 8.0 -3.4 4.3 7 7 A b - 0 0 35 1,-0.2 -1,-0.2 29,-0.1 3,-0.1 -0.283 42.0-165.6 -52.1 118.7 6.5 -6.9 5.1 8 8 A L S S+ 0 0 111 1,-0.2 2,-0.6 -3,-0.2 -1,-0.2 0.635 77.0 58.6 -84.6 -15.7 9.1 -9.5 3.9 9 9 A G S S- 0 0 48 27,-0.0 -1,-0.2 0, 0.0 39,-0.2 -0.930 75.8-165.2-120.9 108.8 6.5 -12.2 4.2 10 10 A Y - 0 0 82 -2,-0.6 2,-0.2 1,-0.1 39,-0.2 0.115 13.8-116.5 -79.9-167.5 3.4 -11.8 2.0 11 11 A T - 0 0 38 37,-1.5 2,-0.2 2,-0.1 39,-0.2 -0.756 4.2-138.4-125.0 170.7 0.0 -13.6 2.1 12 12 A D + 0 0 144 -2,-0.2 2,-0.3 37,-0.1 37,-0.1 -0.668 58.5 105.2-134.0 77.5 -2.0 -15.8 -0.2 13 13 A R - 0 0 156 -2,-0.2 2,-0.4 2,-0.0 -2,-0.1 -0.819 69.1-117.4-133.2 179.1 -5.6 -14.8 -0.1 14 14 A I + 0 0 107 -2,-0.3 2,-0.1 41,-0.1 -2,-0.0 -0.800 42.0 179.2-118.3 83.5 -8.2 -12.9 -2.1 15 15 A L - 0 0 16 -2,-0.4 44,-0.1 1,-0.0 -2,-0.0 -0.451 7.9-162.5 -79.4 158.9 -9.0 -10.0 0.2 16 16 A H >> - 0 0 64 -2,-0.1 3,-1.8 1,-0.1 4,-0.7 -0.786 43.1 -94.5-131.8 175.7 -11.6 -7.5 -1.0 17 17 A P T 34 S+ 0 0 67 0, 0.0 3,-0.4 0, 0.0 -1,-0.1 0.770 118.7 79.4 -56.4 -25.5 -12.9 -4.0 -0.4 18 18 A K T 34 S+ 0 0 162 1,-0.2 -3,-0.0 23,-0.0 24,-0.0 0.751 108.2 21.0 -49.4 -31.6 -15.2 -6.2 1.7 19 19 A F T <4 S+ 0 0 85 -3,-1.8 23,-2.2 22,-0.1 2,-0.5 0.381 105.6 97.0-124.1 0.3 -12.5 -6.3 4.4 20 20 A I E < +A 41 0A 18 -4,-0.7 21,-0.2 -3,-0.4 3,-0.1 -0.817 22.7 152.8-105.9 130.1 -10.3 -3.3 3.6 21 21 A V E S+ 0 0 107 19,-2.8 2,-0.3 -2,-0.5 20,-0.2 0.370 72.7 29.4-123.9 -5.8 -10.6 0.1 5.3 22 22 A G E -A 40 0A 20 18,-1.7 18,-3.0 2,-0.0 2,-0.3 -0.975 58.0-166.0-153.1 162.6 -7.0 1.2 4.8 23 23 A F E -A 39 0A 40 -2,-0.3 2,-0.4 16,-0.3 16,-0.2 -0.974 5.4-178.0-158.0 133.7 -4.1 0.9 2.5 24 24 A T E -A 38 0A 68 14,-2.9 14,-3.2 -2,-0.3 2,-0.4 -0.975 19.2-146.3-135.9 120.4 -0.4 1.6 2.7 25 25 A R E -A 37 0A 95 -2,-0.4 2,-0.5 12,-0.2 12,-0.2 -0.708 8.8-160.6 -93.0 137.2 1.9 1.0 -0.3 26 26 A Q E -A 36 0A 24 10,-1.0 10,-1.0 -2,-0.4 2,-0.2 -0.972 8.0-167.4-120.7 121.0 5.5 -0.1 0.2 27 27 A L >> - 0 0 69 -2,-0.5 5,-0.7 8,-0.2 4,-0.5 -0.586 30.1-123.2-102.5 165.9 8.1 0.3 -2.6 28 28 A A T 45S+ 0 0 40 -2,-0.2 7,-0.1 1,-0.2 -1,-0.0 0.124 109.4 46.0 -94.3 18.4 11.6 -1.1 -3.0 29 29 A N T 45S+ 0 0 134 5,-0.1 -1,-0.2 -27,-0.0 4,-0.1 0.313 100.0 63.0-139.6 2.0 13.1 2.4 -3.4 30 30 A E T 45S- 0 0 81 -3,-0.4 -27,-0.6 2,-0.2 -2,-0.1 0.676 133.2 -54.1-100.0 -21.7 11.5 4.4 -0.6 31 31 A G T <5S+ 0 0 11 1,-0.7 -29,-0.1 -4,-0.5 -3,-0.1 0.022 114.5 81.6 178.2 -54.0 12.9 2.3 2.2 32 32 A a < - 0 0 3 -5,-0.7 -1,-0.7 1,-0.1 -2,-0.2 -0.302 66.2-140.4 -69.0 156.9 12.2 -1.3 1.8 33 33 A D S S+ 0 0 140 -27,-0.2 2,-0.2 -4,-0.1 -5,-0.2 0.661 90.7 38.7 -89.6 -20.1 14.3 -3.5 -0.5 34 34 A I S S- 0 0 41 -7,-0.2 2,-0.4 -28,-0.1 -28,-0.2 -0.582 86.8-117.2-116.3-178.7 11.2 -5.3 -1.6 35 35 A N + 0 0 73 -2,-0.2 2,-0.4 -7,-0.1 -8,-0.2 -0.988 32.1 165.2-129.7 129.1 7.7 -4.1 -2.3 36 36 A A E -A 26 0A 0 -10,-1.0 -10,-1.0 -2,-0.4 2,-0.5 -0.991 31.3-132.2-142.0 132.8 4.5 -5.1 -0.6 37 37 A I E -AB 25 49A 19 12,-2.0 12,-2.8 -2,-0.4 2,-0.9 -0.728 20.4-147.7 -82.3 125.2 1.0 -3.6 -0.6 38 38 A I E -AB 24 48A 13 -14,-3.2 -14,-2.9 -2,-0.5 2,-0.6 -0.825 12.7-170.0 -98.8 101.7 -0.3 -3.2 3.0 39 39 A F E -AB 23 47A 0 8,-1.8 8,-3.3 -2,-0.9 2,-0.7 -0.811 15.4-143.7 -88.0 123.5 -4.1 -3.6 3.0 40 40 A H E -AB 22 46A 65 -18,-3.0 -19,-2.8 -2,-0.6 -18,-1.7 -0.803 18.4-145.5 -92.9 112.7 -5.5 -2.6 6.4 41 41 A T E > -A 20 0A 16 4,-2.6 3,-1.7 -2,-0.7 -21,-0.3 -0.287 24.5-115.3 -75.2 160.5 -8.4 -4.8 7.3 42 42 A K T 3 S+ 0 0 135 -23,-2.2 -1,-0.1 1,-0.3 -22,-0.1 0.357 116.8 70.1 -71.9 5.6 -11.5 -3.8 9.2 43 43 A K T 3 S- 0 0 115 -24,-0.3 -1,-0.3 2,-0.2 3,-0.1 0.173 117.6-112.4-106.6 12.3 -10.0 -6.3 11.6 44 44 A K S < S+ 0 0 201 -3,-1.7 2,-0.4 1,-0.2 -2,-0.1 0.659 77.8 127.1 68.1 19.4 -7.2 -3.9 12.5 45 45 A L - 0 0 117 -4,-0.0 -4,-2.6 -6,-0.0 2,-0.7 -0.899 59.9-129.5-112.7 136.2 -4.6 -6.3 10.9 46 46 A S E -B 40 0A 79 -2,-0.4 2,-0.5 -6,-0.2 -6,-0.2 -0.733 21.9-150.2 -84.9 115.8 -2.1 -5.3 8.2 47 47 A V E -B 39 0A 13 -8,-3.3 2,-1.8 -2,-0.7 -8,-1.8 -0.763 10.8-137.5 -89.1 126.6 -2.3 -7.6 5.2 48 48 A b E -B 38 0A 21 -2,-0.5 -37,-1.5 -10,-0.2 -10,-0.2 -0.605 30.8-162.3 -83.1 81.2 1.0 -8.1 3.3 49 49 A A E -B 37 0A 0 -12,-2.8 -12,-2.0 -2,-1.8 -37,-0.1 -0.454 15.9-122.9 -71.8 134.5 -0.6 -8.0 -0.1 50 50 A N > - 0 0 19 -39,-0.2 3,-1.4 -2,-0.2 6,-0.2 -0.658 5.0-149.7 -80.6 124.3 1.4 -9.4 -3.0 51 51 A P T 3 S+ 0 0 31 0, 0.0 -1,-0.1 0, 0.0 -15,-0.1 0.519 94.4 72.7 -65.6 -0.4 2.0 -6.8 -5.8 52 52 A K T 3 S+ 0 0 167 4,-0.0 2,-0.3 5,-0.0 -3,-0.0 0.724 82.8 78.3 -85.0 -25.5 2.0 -10.0 -7.9 53 53 A Q S <> S- 0 0 29 -3,-1.4 4,-2.0 1,-0.1 3,-0.4 -0.650 72.4-136.5-103.4 145.9 -1.7 -10.8 -7.7 54 54 A T H > S+ 0 0 110 -2,-0.3 4,-3.2 1,-0.2 5,-0.2 0.801 102.3 60.0 -71.4 -32.6 -4.5 -9.2 -9.7 55 55 A W H > S+ 0 0 17 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.872 110.0 45.9 -63.5 -32.9 -7.0 -8.9 -6.8 56 56 A V H > S+ 0 0 1 -3,-0.4 4,-3.0 -6,-0.2 5,-0.2 0.926 111.8 50.0 -69.8 -47.0 -4.3 -6.7 -5.2 57 57 A K H X S+ 0 0 95 -4,-2.0 4,-1.4 1,-0.2 -2,-0.2 0.894 111.9 50.3 -58.0 -40.6 -3.8 -4.8 -8.4 58 58 A Y H X S+ 0 0 133 -4,-3.2 4,-1.7 2,-0.2 3,-0.3 0.958 113.4 42.6 -62.9 -53.1 -7.5 -4.3 -8.6 59 59 A I H X S+ 0 0 4 -4,-2.2 4,-2.6 1,-0.2 -2,-0.2 0.904 113.0 52.6 -63.8 -41.1 -7.9 -3.0 -5.0 60 60 A V H X S+ 0 0 15 -4,-3.0 4,-0.9 1,-0.2 -1,-0.2 0.786 105.6 56.4 -68.4 -25.6 -4.8 -0.8 -5.2 61 61 A R H X S+ 0 0 146 -4,-1.4 4,-0.6 -3,-0.3 3,-0.3 0.935 111.7 41.8 -66.4 -45.2 -6.3 0.8 -8.4 62 62 A L H < S+ 0 0 84 -4,-1.7 3,-0.4 1,-0.2 -2,-0.2 0.862 111.9 55.3 -68.7 -36.4 -9.4 1.8 -6.6 63 63 A L H < S+ 0 0 42 -4,-2.6 3,-0.3 1,-0.2 -1,-0.2 0.692 110.8 45.6 -72.3 -18.5 -7.4 2.9 -3.5 64 64 A S H < S+ 0 0 53 -4,-0.9 -1,-0.2 -3,-0.3 -2,-0.2 0.543 112.5 53.9 -94.5 -11.4 -5.4 5.2 -5.8 65 65 A K < + 0 0 165 -4,-0.6 2,-2.2 -3,-0.4 -1,-0.2 -0.273 61.0 151.7-119.9 47.1 -8.6 6.4 -7.5 66 66 A K + 0 0 187 -3,-0.3 2,-0.4 2,-0.1 -3,-0.1 -0.551 23.0 174.6 -76.0 77.9 -10.7 7.6 -4.6 67 67 A V - 0 0 120 -2,-2.2 2,-1.6 -5,-0.1 3,-0.4 -0.763 36.4-118.8 -87.4 133.6 -12.6 10.2 -6.6 68 68 A K + 0 0 167 -2,-0.4 -2,-0.1 1,-0.2 -1,-0.0 -0.566 63.5 132.6 -79.9 88.4 -15.3 11.9 -4.7 69 69 A N 0 0 148 -2,-1.6 -1,-0.2 1,-0.3 -3,-0.0 0.787 360.0 360.0 -95.9 -43.8 -18.5 11.0 -6.7 70 70 A M 0 0 203 -3,-0.4 -1,-0.3 0, 0.0 -3,-0.0 -0.958 360.0 360.0-122.8 360.0 -20.6 10.0 -3.7