==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 16-DEC-07 2JYP . COMPND 2 MOLECULE: ARAGONITE PROTEIN AP7; . SOURCE 2 SYNTHETIC: YES . AUTHOR S.COLLINO,I.KIM,J.EVANS . 36 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2828.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 30.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A T 0 0 57 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 59.7 26.7 31.1 -16.3 2 2 A R + 0 0 197 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.164 360.0 52.6-165.4 -7.7 26.8 28.0 -18.3 3 3 A H S S- 0 0 119 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.705 135.6 -54.8-106.2 -37.1 23.1 27.3 -18.2 4 4 A S S S+ 0 0 54 9,-0.0 9,-0.1 3,-0.0 5,-0.0 0.393 121.1 76.7 161.5 27.2 21.7 30.6 -19.3 5 5 A F S >>S+ 0 0 128 2,-0.2 4,-0.9 3,-0.1 5,-0.8 0.579 77.7 75.3-122.1 -25.4 23.0 33.4 -17.3 6 6 A R T 45S+ 0 0 25 1,-0.1 6,-0.4 3,-0.1 10,-0.1 0.350 116.5 25.5 -61.9 10.9 26.2 33.4 -18.9 7 7 A R T >5S+ 0 0 91 4,-0.2 4,-6.0 3,-0.2 -2,-0.2 0.469 96.2 74.4-139.2 -65.7 23.9 35.0 -21.6 8 8 A P T 45S+ 0 0 84 0, 0.0 -3,-0.1 0, 0.0 -2,-0.1 0.831 130.8 17.6 -27.7 -38.3 20.6 36.8 -20.5 9 9 A F T <5S+ 0 0 134 -4,-0.9 -3,-0.1 1,-0.1 -4,-0.1 0.736 135.6 46.8 -97.7 -37.6 23.2 39.3 -19.5 10 10 A H T 4>>S+ 0 0 0 1,-0.1 4,-3.9 3,-0.1 2,-2.1 0.658 117.8 49.9-124.5 -61.4 26.7 34.1 -29.3 16 16 A Y T 345S+ 0 0 130 1,-0.3 -1,-0.1 3,-0.2 -4,-0.1 -0.561 116.7 43.3 -87.0 83.4 28.6 31.8 -26.8 17 17 A S T 345S+ 0 0 75 -2,-2.1 -1,-0.3 -3,-0.1 -3,-0.1 0.061 129.3 24.3 170.1 -19.9 27.1 28.7 -28.3 18 18 A I T <4>S+ 0 0 68 -3,-1.7 5,-0.7 -5,-0.4 4,-0.3 0.449 140.2 28.5-136.5 -20.0 27.4 29.5 -32.0 19 19 A T T <5S+ 0 0 7 -4,-3.9 -3,-0.2 -6,-0.3 -4,-0.1 0.531 99.2 95.9-106.2 -23.6 30.2 32.0 -31.8 20 20 A D T < + 0 0 104 -5,-0.7 3,-1.5 1,-0.2 -5,-0.1 0.099 52.2 64.6 -78.4-161.6 31.0 31.1 -35.8 24 24 A R T 3 S- 0 0 80 1,-0.3 4,-0.4 2,-0.1 -1,-0.2 0.303 106.1-111.1 68.9 -18.7 28.6 34.0 -35.8 25 25 A Q T 3 S- 0 0 124 -3,-0.5 -1,-0.3 2,-0.1 4,-0.2 0.800 74.7 -56.9 57.5 28.7 31.6 35.9 -37.1 26 26 A R X - 0 0 96 -3,-1.5 3,-4.8 2,-0.2 2,-0.5 0.961 67.6 -88.4 67.2 98.4 31.3 37.5 -33.7 27 27 A a G > S- 0 0 12 1,-0.4 3,-1.7 2,-0.2 -1,-0.1 0.121 104.1 -42.2 -29.5 74.1 28.0 39.2 -32.8 28 28 A I G 3 S- 0 0 136 -2,-0.5 -1,-0.4 -4,-0.4 -2,-0.2 0.836 115.6 -51.9 58.4 30.2 29.5 42.3 -34.4 29 29 A D G X>>S+ 0 0 74 -3,-4.8 3,-7.2 -4,-0.2 2,-6.3 0.545 83.9 171.5 81.9 10.3 32.7 41.3 -32.5 30 30 A M T <45S+ 0 0 6 -3,-1.7 -3,-0.2 3,-0.3 -1,-0.2 0.014 80.9 40.8 -50.1 48.8 30.6 41.0 -29.2 31 31 A Y T 345S+ 0 0 55 -2,-6.3 -1,-0.3 -5,-0.1 5,-0.2 0.069 133.4 25.2-168.7 -12.7 33.7 39.4 -27.6 32 32 A C T <45S+ 0 0 60 -3,-7.2 -2,-0.3 3,-0.2 -3,-0.1 0.522 128.8 46.0-122.8 -43.6 35.9 41.8 -29.3 33 33 A S T <5S+ 0 0 52 -4,-6.1 -3,-0.3 1,-0.2 -4,-0.1 0.628 129.7 28.5 -75.2 -18.9 33.2 44.4 -29.6 34 34 A Y S