==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 19-DEC-07 2JYV . COMPND 2 MOLECULE: GRANULIN-2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.TOLKATCHEV,P.WANG,Z.CHEN,P.XU,F.NI . 32 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3138.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 34.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 88 0, 0.0 2,-0.3 0, 0.0 12,-0.1 0.000 360.0 360.0 360.0 100.2 -5.9 8.1 -0.3 2 2 A I B -A 11 0A 135 9,-0.8 9,-1.4 10,-0.2 2,-0.1 -0.752 360.0-118.5-116.5 164.0 -3.3 8.1 2.5 3 3 A Q - 0 0 151 -2,-0.3 14,-0.2 7,-0.2 7,-0.1 -0.231 17.5-154.0 -90.8-176.8 0.5 8.0 2.6 4 4 A a - 0 0 17 5,-0.3 3,-0.4 3,-0.1 5,-0.2 -0.818 16.6-122.6-164.7 119.3 2.8 5.4 4.1 5 5 A P S S+ 0 0 104 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.019 93.6 38.7 -56.3 168.3 6.4 5.8 5.4 6 6 A D S S+ 0 0 140 1,-0.2 2,-0.3 2,-0.0 19,-0.1 0.762 103.4 100.7 58.5 25.6 9.3 3.6 4.1 7 7 A S - 0 0 34 -3,-0.4 -1,-0.2 1,-0.1 -3,-0.1 -0.964 63.2-154.0-139.5 155.0 7.7 4.0 0.6 8 8 A Q S S+ 0 0 191 -2,-0.3 2,-0.2 -3,-0.1 -1,-0.1 0.350 81.3 49.0-108.0 2.2 8.2 6.1 -2.5 9 9 A F S S- 0 0 100 -5,-0.2 -5,-0.3 0, 0.0 2,-0.2 -0.791 73.9-123.8-133.4 176.0 4.6 5.9 -3.7 10 10 A E - 0 0 138 -2,-0.2 -7,-0.2 -7,-0.1 17,-0.2 -0.644 14.1-134.0-117.0 175.2 1.1 6.4 -2.3 11 11 A b B -A 2 0A 6 -9,-1.4 -9,-0.8 -2,-0.2 6,-0.1 -0.996 13.8-139.6-135.3 137.6 -2.1 4.3 -2.2 12 12 A P > - 0 0 68 0, 0.0 3,-1.1 0, 0.0 -10,-0.2 -0.143 40.3 -89.9 -84.1-176.9 -5.7 5.2 -3.0 13 13 A D T 3 S+ 0 0 146 1,-0.2 3,-0.1 -12,-0.1 -2,-0.0 0.391 120.7 70.9 -75.2 5.0 -9.0 4.3 -1.2 14 14 A F T 3 S+ 0 0 185 1,-0.3 16,-0.6 15,-0.1 2,-0.3 0.726 109.9 16.0 -91.5 -26.5 -9.1 1.2 -3.4 15 15 A S E < S-B 29 0B 26 -3,-1.1 -1,-0.3 14,-0.2 2,-0.1 -0.997 73.7-125.6-150.0 144.4 -6.1 -0.5 -1.7 16 16 A T E -B 28 0B 57 12,-2.2 12,-2.1 -2,-0.3 2,-0.8 -0.393 38.6 -94.0 -85.1 165.0 -4.2 -0.1 1.6 17 17 A a E +B 27 0B 29 10,-0.2 10,-0.2 -14,-0.2 2,-0.2 -0.714 62.7 147.5 -84.6 109.8 -0.4 0.3 1.9 18 18 A C E -B 26 0B 60 8,-2.5 8,-2.6 -2,-0.8 2,-0.2 -0.673 35.4-123.4-129.8-176.0 1.2 -3.1 2.4 19 19 A V E -B 25 0B 87 6,-0.2 2,-0.2 -2,-0.2 6,-0.2 -0.738 15.0-131.1-126.6 175.3 4.4 -5.0 1.6 20 20 A M - 0 0 108 4,-1.5 6,-0.0 -2,-0.2 0, 0.0 -0.702 26.7-110.5-122.5 175.0 5.5 -8.2 -0.2 21 21 A V S S+ 0 0 154 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.0 0.794 112.0 63.7 -75.4 -29.6 7.7 -11.2 0.5 22 22 A D S S- 0 0 153 2,-0.1 -1,-0.2 1,-0.1 -3,-0.0 0.947 120.0-100.0 -59.6 -51.7 10.2 -10.0 -2.1 23 23 A G S S+ 0 0 70 1,-0.3 2,-0.3 0, 0.0 -2,-0.1 0.515 82.6 109.2 135.7 23.8 11.1 -6.8 -0.3 24 24 A S - 0 0 64 -17,-0.0 -4,-1.5 2,-0.0 -1,-0.3 -0.889 61.1-117.1-125.7 156.4 9.1 -4.1 -2.0 25 25 A W E +B 19 0B 81 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.461 38.0 156.7 -88.1 162.3 6.1 -1.9 -1.0 26 26 A G E -B 18 0B 25 -8,-2.6 -8,-2.5 -2,-0.1 2,-0.7 -0.916 44.6 -97.5-179.5 153.1 2.7 -1.9 -2.8 27 27 A b E -B 17 0B 51 -2,-0.3 -10,-0.2 -10,-0.2 -11,-0.1 -0.726 39.8-167.1 -85.7 116.4 -1.0 -1.2 -2.4 28 28 A C E -B 16 0B 68 -12,-2.1 -12,-2.2 -2,-0.7 -2,-0.0 -0.825 30.0 -97.3-105.5 142.4 -3.0 -4.4 -1.6 29 29 A P E -B 15 0B 95 0, 0.0 -14,-0.2 0, 0.0 3,-0.1 -0.280 46.5-105.1 -57.1 134.4 -6.8 -4.7 -1.7 30 30 A M - 0 0 139 -16,-0.6 2,-0.5 1,-0.1 0, 0.0 -0.263 40.0 -99.2 -60.6 145.9 -8.5 -4.3 1.6 31 31 A P 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.562 360.0 360.0 -72.8 118.0 -9.8 -7.5 3.3 32 32 A Q 0 0 246 -2,-0.5 0, 0.0 -3,-0.1 0, 0.0 -0.640 360.0 360.0 -96.5 360.0 -13.5 -7.9 2.7