==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 20-SEP-01 1K0P . COMPND 2 MOLECULE: DNA POLYMERASE ALPHA CATALYTIC SUBUNIT; . SOURCE 2 SYNTHETIC: YES; . AUTHOR W.W.YANG,F.EVANICS,S.BASU,R.N.BOSE . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2768.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 38.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 19.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 161 0, 0.0 2,-0.7 0, 0.0 30,-0.1 0.000 360.0 360.0 360.0 -63.3 9.8 2.3 4.8 2 2 A C + 0 0 16 4,-0.1 2,-0.3 2,-0.0 28,-0.1 -0.440 360.0 164.6 -85.0 99.4 8.2 0.8 1.5 3 3 A E >> - 0 0 152 -2,-0.7 4,-1.7 28,-0.1 3,-1.6 -0.817 46.9-106.5 -92.5 159.4 9.6 -2.1 -0.6 4 4 A E H 3> S+ 0 0 160 1,-0.3 4,-1.4 -2,-0.3 6,-0.1 0.600 114.1 50.5 -89.9 -8.2 7.2 -3.8 -3.2 5 5 A P H 34 S+ 0 0 90 0, 0.0 -1,-0.3 0, 0.0 -3,-0.0 0.250 116.7 50.8 -81.6 9.2 6.3 -7.3 -1.9 6 6 A T H <> S+ 0 0 67 -3,-1.6 4,-0.5 2,-0.1 -2,-0.3 0.674 111.3 45.5 -99.3 -54.8 5.5 -5.1 1.2 7 7 A C H X S+ 0 0 11 -4,-1.7 4,-2.5 2,-0.3 7,-0.2 0.735 107.7 55.6 -49.0 -36.5 3.3 -2.6 -0.9 8 8 A R H X S+ 0 0 194 -4,-1.4 4,-1.3 2,-0.2 6,-0.2 0.892 109.6 46.9 -59.6 -48.3 1.6 -5.5 -2.6 9 9 A N H > S+ 0 0 87 2,-0.2 4,-1.0 1,-0.2 -2,-0.3 0.715 117.8 42.5 -47.8 -42.0 0.9 -6.3 1.1 10 10 A R H < S+ 0 0 76 -4,-0.5 6,-0.3 2,-0.3 -2,-0.2 0.568 106.0 58.0 -84.5 -23.9 -0.1 -2.4 1.4 11 11 A T H < S+ 0 0 49 -4,-2.5 -2,-0.2 2,-0.3 -3,-0.2 0.712 110.2 45.4 -61.2 -43.6 -2.0 -2.6 -1.8 12 12 A R H < S+ 0 0 143 -4,-1.3 -2,-0.3 2,-0.3 -3,-0.1 0.854 111.9 45.8 -56.4 -57.4 -3.6 -5.2 0.4 13 13 A H S >< S+ 0 0 60 -4,-1.0 3,-0.5 2,-0.2 -2,-0.3 0.592 97.9 77.5 -51.2 -28.9 -3.6 -2.5 3.1 14 14 A L T 3 S+ 0 0 24 1,-0.2 5,-0.3 -7,-0.2 -2,-0.3 0.995 88.9 49.5 -53.5 -57.4 -4.9 -0.8 0.1 15 15 A P T 3 S+ 0 0 91 0, 0.0 -1,-0.2 0, 0.0 -2,-0.2 0.423 88.1 83.8 -58.5 3.3 -8.1 -2.6 1.0 16 16 A L S < S- 0 0 111 -3,-0.5 2,-1.1 -6,-0.3 -3,-0.1 -0.328 88.1-178.5 -75.7 37.8 -7.1 -1.0 4.2 17 17 A Q + 0 0 116 1,-0.2 -3,-0.1 7,-0.0 3,-0.1 -0.500 54.5 121.1 -83.4 84.5 -9.0 1.7 2.3 18 18 A F S S+ 0 0 223 -2,-1.1 2,-0.4 1,-0.1 -1,-0.2 0.345 95.8 56.4 -58.0 -21.3 -9.5 5.2 3.6 19 19 A S - 0 0 17 -5,-0.3 2,-0.6 -3,-0.1 -3,-0.1 -0.990 58.2-170.7-124.6 123.2 -7.6 5.4 0.2 20 20 A R S S- 0 0 189 -2,-0.4 -6,-0.0 1,-0.1 -3,-0.0 -0.704 113.4 -23.2 -96.2 69.0 -8.4 4.1 -3.4 21 21 A T S S+ 0 0 89 -2,-0.6 -1,-0.1 3,-0.1 4,-0.1 0.786 106.5 136.6 75.0 44.5 -4.8 5.2 -4.2 22 22 A G S S- 0 0 50 -8,-0.1 -2,-0.0 2,-0.0 6,-0.0 0.133 106.5 -50.7-113.9 20.6 -5.0 7.6 -1.2 23 23 A P S S+ 0 0 40 0, 0.0 2,-0.4 0, 0.0 6,-0.2 0.108 93.5 158.5-125.4 114.7 -2.2 6.1 -1.2 24 24 A L - 0 0 19 3,-0.2 -13,-0.3 2,-0.1 -3,-0.1 -0.931 67.8 -54.5-140.8 133.2 -2.0 2.2 -1.4 25 25 A C S > S+ 0 0 2 -2,-0.4 3,-1.0 -18,-0.1 -17,-0.1 -0.883 139.6 28.4-104.3 4.0 0.5 0.8 -2.4 26 26 A P T 3 S+ 0 0 122 0, 0.0 -2,-0.1 0, 0.0 -1,-0.1 0.180 117.4 66.5 -81.6 18.4 1.8 2.0 -5.7 27 27 A A T 3 S+ 0 0 21 -20,-0.1 -3,-0.2 -4,-0.1 -7,-0.0 0.425 86.8 134.1 -80.4 2.0 -0.0 5.0 -4.3 28 28 A C < + 0 0 37 -3,-1.0 2,-0.2 1,-0.1 -4,-0.1 -0.117 41.0 179.1 -75.9 123.3 3.0 4.7 -1.8 29 29 A M + 0 0 176 -6,-0.2 2,-0.4 2,-0.0 -1,-0.1 -0.467 49.2 121.4 -99.0 64.6 5.1 7.7 -0.6 30 30 A K 0 0 53 -2,-0.2 -2,-0.0 -28,-0.1 0, 0.0 -0.974 360.0 360.0-137.3 117.0 7.3 5.5 1.7 31 31 A A 0 0 122 -2,-0.4 -28,-0.1 -30,-0.1 -2,-0.0 -0.391 360.0 360.0 68.8 360.0 11.1 5.0 1.5