==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 31-JAN-08 2K0A . COMPND 2 MOLECULE: PRE-MRNA-SPLICING FACTOR RDS3; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR N.LOENING,A.VAN ROON,J.YANG,K.NAGAI,D.NEUHAUS . 109 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7494.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 49.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 12.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G 0 0 125 0, 0.0 2,-0.2 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 133.2 -9.2 -24.3 -3.9 2 0 A G + 0 0 35 1,-0.1 3,-0.2 3,-0.0 5,-0.1 -0.562 360.0 128.5 79.5-142.4 -9.9 -20.8 -5.2 3 1 A S S S+ 0 0 131 3,-0.2 2,-0.2 -2,-0.2 -1,-0.1 0.905 82.0 47.1 53.6 43.1 -8.4 -19.7 -8.5 4 2 A S S S+ 0 0 72 -3,-0.0 2,-1.1 0, 0.0 3,-0.4 -0.515 117.9 2.5-167.1-121.3 -11.8 -18.7 -9.7 5 3 A R S S+ 0 0 245 1,-0.2 -3,-0.0 -3,-0.2 -2,-0.0 -0.236 117.9 68.6 -88.5 51.8 -14.6 -16.7 -8.1 6 4 A H + 0 0 160 -2,-1.1 -3,-0.2 0, 0.0 -1,-0.2 -0.234 60.6 117.8-152.1 36.9 -12.6 -15.9 -5.0 7 5 A Q > - 0 0 115 -3,-0.4 3,-0.8 -5,-0.1 -2,-0.1 0.737 59.8-150.0 -80.3 -34.0 -10.1 -13.7 -6.6 8 6 A F T 3 - 0 0 114 1,-0.2 3,-0.1 2,-0.1 -1,-0.1 0.053 36.9-117.0 77.4 -23.2 -10.9 -10.5 -4.6 9 7 A D T 3 + 0 0 88 1,-0.2 2,-2.4 3,-0.0 -1,-0.2 0.855 49.0 173.3 61.5 39.8 -9.8 -8.7 -7.8 10 8 A L < + 0 0 49 -3,-0.8 2,-0.8 24,-0.1 -1,-0.2 -0.198 5.4 178.1 -73.9 52.0 -6.9 -7.1 -6.0 11 9 A I + 0 0 79 -2,-2.4 81,-3.1 -3,-0.1 82,-1.6 -0.403 13.3 176.0 -61.1 98.8 -5.5 -5.7 -9.3 12 10 A M B -A 91 0A 16 -2,-0.8 79,-0.2 79,-0.2 76,-0.1 -0.757 43.7-112.7-114.2 156.7 -2.6 -3.8 -7.9 13 11 A C - 0 0 23 77,-1.9 -1,-0.1 -2,-0.3 78,-0.1 0.943 40.9-178.8 -53.8 -49.7 0.2 -1.8 -9.6 14 12 A L + 0 0 58 74,-3.4 -1,-0.1 1,-0.1 2,-0.1 0.791 27.8 133.3 51.9 43.1 2.9 -4.3 -8.4 15 13 A K - 0 0 105 1,-0.1 73,-1.1 72,-0.0 -1,-0.1 -0.058 69.9 -51.1 -95.6-155.4 5.9 -2.5 -10.0 16 14 A Q - 0 0 146 71,-0.2 33,-1.5 -2,-0.1 34,-0.3 -0.714 61.2-128.0 -87.3 111.9 9.2 -1.8 -8.4 17 15 A P E -B 48 0B 35 0, 0.0 31,-0.4 0, 0.0 30,-0.2 -0.275 25.6-165.1 -60.1 138.6 8.7 -0.1 -5.0 18 16 A G E - 0 0 6 29,-3.1 30,-0.1 2,-0.3 32,-0.0 0.189 40.8 -79.1 -97.9-140.2 10.6 3.2 -4.4 19 17 A V E S+ 0 0 110 2,-0.1 2,-0.3 27,-0.1 29,-0.1 0.701 97.6 96.8 -98.4 -29.1 11.3 5.1 -1.2 20 18 A Q E S- 0 0 80 27,-0.2 27,-1.8 26,-0.1 -2,-0.3 -0.488 73.4-132.7 -69.2 125.5 7.9 6.8 -0.9 21 19 A T E -B 46 0B 37 -2,-0.3 2,-0.5 25,-0.2 25,-0.3 -0.586 22.1-106.5 -82.3 142.4 5.7 4.8 1.5 22 20 A G - 0 0 0 23,-3.0 50,-3.1 -2,-0.2 2,-0.3 -0.569 37.3-149.6 -72.8 118.5 2.1 4.0 0.5 23 21 A L E -C 71 0C 35 34,-0.6 38,-2.1 -2,-0.5 2,-0.4 -0.677 3.7-150.0 -92.2 143.8 -0.3 6.2 2.5 24 22 A L E -C 70 0C 3 46,-3.3 45,-2.9 -2,-0.3 46,-2.1 -0.931 14.8-128.4-110.3 136.6 -3.8 5.2 3.5 25 23 A C > - 0 0 4 -2,-0.4 3,-2.0 43,-0.3 4,-0.2 -0.408 34.7-107.7 -72.6 152.4 -6.7 7.6 3.9 26 24 A E G > S+ 0 0 150 1,-0.3 3,-0.7 2,-0.2 -1,-0.1 0.761 120.2 64.7 -55.0 -25.4 -8.5 7.2 7.3 27 25 A K G 3 S+ 0 0 98 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.778 114.6 29.2 -72.2 -23.3 -11.3 5.6 5.4 28 26 A C G X S+ 0 0 8 -3,-2.0 3,-1.4 3,-0.1 -1,-0.2 0.116 92.3 138.3-116.3 15.4 -9.1 2.7 4.4 29 27 A D T < + 0 0 62 -3,-0.7 3,-0.1 1,-0.2 -3,-0.1 -0.456 69.7 19.1 -68.3 129.8 -6.9 3.0 7.5 30 28 A G T 3 S+ 0 0 40 1,-0.3 2,-0.3 -2,-0.2 7,-0.3 0.108 94.2 126.0 98.1 -21.3 -6.0 -0.4 8.9 31 29 A K < - 0 0 21 -3,-1.4 -1,-0.3 7,-0.1 42,-0.2 -0.535 62.2-129.8 -71.8 134.6 -6.8 -2.2 5.7 32 30 A C >> - 0 0 4 -2,-0.3 4,-1.5 1,-0.1 3,-0.8 -0.707 14.1-141.9 -81.8 121.6 -4.1 -4.4 4.2 33 31 A P T 34 S+ 0 0 3 0, 0.0 -1,-0.1 0, 0.0 41,-0.1 0.795 98.3 51.2 -54.1 -34.2 -3.8 -3.4 0.6 34 32 A I T 34 S- 0 0 3 1,-0.0 -24,-0.1 57,-0.0 40,-0.1 0.754 137.8 -7.9 -76.0 -32.7 -3.3 -7.0 -0.5 35 33 A C T <4 S- 0 0 37 -3,-0.8 -1,-0.0 -27,-0.0 -4,-0.0 0.581 78.4-135.8-138.0 -34.5 -6.3 -8.6 1.3 36 34 A D < + 0 0 50 -4,-1.5 -5,-0.1 3,-0.1 -6,-0.0 0.976 53.0 133.7 64.3 86.9 -8.1 -6.1 3.6 37 35 A S - 0 0 76 -7,-0.3 -6,-0.1 2,-0.1 -1,-0.1 0.203 67.3-118.5-154.4 25.3 -8.8 -8.0 6.8 38 36 A Y + 0 0 145 -8,-0.2 2,-0.2 1,-0.2 -7,-0.1 0.859 65.8 145.3 36.8 50.1 -7.8 -5.6 9.6 39 37 A V - 0 0 33 -9,-0.2 -1,-0.2 1,-0.1 -2,-0.1 -0.695 57.9 -56.7-118.2 162.8 -5.2 -8.1 10.8 40 38 A R - 0 0 160 -2,-0.2 36,-2.8 35,-0.1 37,-0.4 -0.097 56.5-146.7 -42.4 128.5 -1.7 -7.8 12.3 41 39 A P + 0 0 74 0, 0.0 35,-0.4 0, 0.0 34,-0.2 0.201 21.2 178.5 -76.6-154.2 0.7 -5.8 10.1 42 40 A K + 0 0 112 33,-0.1 2,-0.3 1,-0.1 33,-0.1 0.157 59.9 19.5-176.4 -49.0 4.4 -6.3 9.6 43 41 A R E S-D 74 0D 162 31,-0.9 31,-3.0 0, 0.0 -1,-0.1 -0.990 74.3-105.5-150.1 136.1 6.0 -3.9 7.2 44 42 A K E -D 73 0D 86 -2,-0.3 29,-0.3 29,-0.3 2,-0.2 -0.366 41.8-115.6 -61.7 134.6 5.2 -0.5 5.6 45 43 A V - 0 0 0 27,-3.3 -23,-3.0 -23,-0.3 2,-0.6 -0.517 23.7-148.4 -74.0 134.4 4.1 -0.8 2.0 46 44 A R E -B 21 0B 105 -25,-0.3 -25,-0.2 -2,-0.2 2,-0.2 -0.919 9.0-142.1-108.1 122.2 6.4 0.9 -0.6 47 45 A V E - 0 0 0 -27,-1.8 -29,-3.1 -2,-0.6 -27,-0.2 -0.550 30.7 -99.0 -81.9 143.8 4.8 2.3 -3.7 48 46 A C E >> -B 17 0B 0 -31,-0.4 4,-1.9 -2,-0.2 3,-1.5 -0.287 29.0-115.2 -61.3 149.1 6.7 2.0 -7.0 49 47 A E H 3> S+ 0 0 103 -33,-1.5 4,-3.2 1,-0.3 5,-0.1 0.855 115.8 67.0 -54.6 -34.5 8.6 5.0 -8.1 50 48 A N H 34 S+ 0 0 94 -34,-0.3 -1,-0.3 1,-0.3 6,-0.2 0.855 109.1 37.6 -53.9 -36.2 6.3 5.2 -11.1 51 49 A C H X4 S+ 0 0 14 -3,-1.5 3,-1.0 2,-0.2 -1,-0.3 0.796 113.6 56.6 -83.8 -32.3 3.6 6.1 -8.6 52 50 A S H 3< S+ 0 0 12 -4,-1.9 3,-0.4 1,-0.3 -2,-0.2 0.965 118.9 30.8 -67.2 -49.0 5.8 8.2 -6.4 53 51 A F T 3< S+ 0 0 143 -4,-3.2 -1,-0.3 1,-0.2 -2,-0.2 0.048 108.1 80.2 -95.4 28.5 6.8 10.5 -9.2 54 52 A G S < S- 0 0 22 -3,-1.0 2,-2.7 -5,-0.1 -1,-0.2 -0.095 106.1-107.6-127.6 38.9 3.5 10.0 -10.9 55 53 A K S > S+ 0 0 187 -3,-0.4 2,-2.3 1,-0.1 3,-0.6 -0.191 104.7 89.7 69.5 -48.8 1.2 12.4 -8.9 56 54 A Q T 3 + 0 0 96 -2,-2.7 -1,-0.1 1,-0.2 -3,-0.1 -0.502 58.9 104.0 -78.3 70.3 -0.5 9.5 -7.1 57 55 A A T 3 S+ 0 0 9 -2,-2.3 -34,-0.6 -5,-0.1 -1,-0.2 0.724 81.0 28.9-117.2 -54.6 1.9 9.4 -4.3 58 56 A K S < S+ 0 0 142 -3,-0.6 10,-2.9 -6,-0.1 3,-0.1 0.760 99.4 97.7 -82.0 -29.8 0.4 11.0 -1.2 59 57 A N B S-E 67 0E 50 -4,-0.4 -36,-0.3 8,-0.3 8,-0.3 -0.333 95.4 -79.5 -63.9 144.9 -3.1 10.0 -2.1 60 58 A C > - 0 0 0 6,-3.5 4,-0.6 1,-0.1 5,-0.3 -0.096 34.6-147.3 -47.4 131.7 -4.5 6.8 -0.5 61 59 A I T 4 S+ 0 0 0 -38,-2.1 30,-2.1 2,-0.2 -1,-0.1 0.757 92.4 51.8 -76.0 -29.5 -3.2 3.7 -2.2 62 60 A I T 4 S+ 0 0 17 -39,-0.3 32,-0.2 28,-0.2 -1,-0.1 0.923 126.5 19.9 -77.7 -45.7 -6.4 1.7 -1.6 63 61 A C T 4 S- 0 0 13 3,-0.2 -2,-0.2 -38,-0.0 -1,-0.2 0.295 89.7-147.0-109.4 14.3 -9.0 4.1 -2.9 64 62 A N S < S+ 0 0 54 -4,-0.6 -3,-0.1 1,-0.2 3,-0.1 0.745 79.0 69.6 22.3 58.2 -6.6 6.2 -5.0 65 63 A L S S+ 0 0 121 1,-0.6 2,-0.2 -5,-0.3 -1,-0.2 0.217 78.5 61.1-155.3 -67.6 -8.6 9.3 -4.4 66 64 A N S S- 0 0 70 -3,-0.1 -6,-3.5 -7,-0.1 -1,-0.6 -0.520 92.8 -99.7 -78.2 139.8 -8.5 10.8 -0.9 67 65 A V B -E 59 0E 77 -8,-0.3 -8,-0.3 -2,-0.2 2,-0.2 -0.307 40.8-117.2 -61.7 139.6 -5.0 11.8 0.3 68 66 A G + 0 0 7 -10,-2.9 -43,-0.3 -43,-0.2 3,-0.1 -0.593 30.3 178.2 -84.1 145.2 -3.4 9.2 2.6 69 67 A V + 0 0 72 -45,-2.9 2,-0.4 1,-0.3 -44,-0.2 0.736 67.1 43.2-111.1 -41.7 -2.6 9.9 6.2 70 68 A N E S-C 24 0C 70 -46,-2.1 -46,-3.3 0, 0.0 -1,-0.3 -0.934 85.1-113.5-114.6 135.3 -1.1 6.7 7.6 71 69 A D E -C 23 0C 40 -2,-0.4 -48,-0.3 -48,-0.3 2,-0.2 -0.380 36.5-120.0 -62.1 134.5 1.4 4.4 5.9 72 70 A A - 0 0 1 -50,-3.1 -27,-3.3 -27,-0.2 2,-0.4 -0.495 22.7-148.8 -75.5 147.2 -0.1 1.1 5.0 73 71 A F E -D 44 0D 82 -29,-0.3 2,-0.3 -42,-0.2 -29,-0.3 -0.959 16.8-121.1-117.3 136.2 1.4 -2.1 6.4 74 72 A Y E -D 43 0D 13 -31,-3.0 -31,-0.9 -2,-0.4 2,-0.1 -0.528 38.6-118.4 -67.8 128.6 1.4 -5.5 4.7 75 73 A C > - 0 0 0 -2,-0.3 4,-2.1 -34,-0.2 3,-0.4 -0.411 18.7-114.7 -72.2 149.1 -0.4 -7.9 7.0 76 74 A W H > S+ 0 0 125 -36,-2.8 4,-2.9 -35,-0.4 5,-0.2 0.840 114.9 57.8 -51.1 -39.5 1.6 -10.8 8.4 77 75 A E H > S+ 0 0 93 -37,-0.4 4,-2.6 2,-0.2 -1,-0.2 0.934 108.0 44.7 -61.3 -45.6 -0.6 -13.3 6.5 78 76 A C H >>S+ 0 0 2 -3,-0.4 5,-2.7 1,-0.2 4,-2.1 0.875 114.1 51.1 -65.6 -36.7 0.2 -11.7 3.1 79 77 A C H <5S+ 0 0 20 -4,-2.1 -2,-0.2 3,-0.2 -1,-0.2 0.907 110.4 48.8 -66.3 -41.8 3.9 -11.5 4.0 80 78 A R H <5S+ 0 0 175 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.937 114.7 44.4 -62.8 -47.2 3.8 -15.2 5.0 81 79 A L H <5S- 0 0 104 -4,-2.6 -1,-0.2 -5,-0.2 -2,-0.2 0.831 114.1-121.3 -66.0 -33.8 2.1 -16.2 1.7 82 80 A G T <5S+ 0 0 14 -4,-2.1 -3,-0.2 -5,-0.2 -4,-0.1 0.828 73.2 127.4 92.4 40.2 4.5 -13.9 -0.2 83 81 A K S > S- 0 0 76 3,-0.2 3,-1.2 -5,-0.0 -1,-0.2 -0.960 120.4 -27.4-162.7 139.7 -15.9 -2.3 -0.6 100 98 A D T 3 S- 0 0 92 -2,-0.3 3,-0.0 1,-0.2 -1,-0.0 -0.234 99.9 -62.6 55.1-135.0 -18.6 -5.0 -1.4 101 99 A R T 3 S+ 0 0 187 -3,-0.1 2,-0.4 2,-0.0 -1,-0.2 -0.314 99.5 105.4-139.1 47.0 -21.6 -3.4 -3.1 102 100 A H < + 0 0 110 -3,-1.2 -3,-0.2 1,-0.1 6,-0.1 -0.964 25.6 160.9-136.4 131.4 -22.9 -0.9 -0.6 103 101 A F - 0 0 106 -2,-0.4 5,-0.2 4,-0.1 -1,-0.1 0.782 31.5-169.3-105.8 -37.1 -22.8 2.8 -0.2 104 102 A E - 0 0 137 1,-0.2 4,-0.1 3,-0.1 -2,-0.1 0.964 68.2 -39.9 50.0 68.3 -25.7 2.7 2.3 105 103 A K S S+ 0 0 201 2,-0.1 -1,-0.2 1,-0.1 3,-0.0 0.880 113.8 107.7 52.6 49.2 -26.6 6.4 2.6 106 104 A K S > S- 0 0 93 0, 0.0 2,-3.1 0, 0.0 3,-0.6 -0.133 92.4-106.1-145.0 40.1 -23.0 7.6 2.6 107 105 A K T 3 S- 0 0 169 1,-0.3 -2,-0.1 0, 0.0 -3,-0.1 -0.338 77.9 -57.7 69.2 -61.0 -22.7 9.3 -0.8 108 106 A K T 3 0 0 89 -2,-3.1 -10,-0.4 1,-0.3 -1,-0.3 0.042 360.0 360.0 178.8 -30.8 -20.6 6.4 -2.1 109 107 A V < 0 0 51 -3,-0.6 -1,-0.3 -12,-0.1 -6,-0.1 -0.966 360.0 360.0-157.5 360.0 -17.8 6.4 0.4