==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 25-SEP-01 1K1C . COMPND 2 MOLECULE: CATABOLITE REPRESSION HPR-LIKE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR A.FAVIER,B.BRUTSCHER,M.BLACKLEDGE,A.GALINIER,J.DEUTSCHER, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4016.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 90.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 23.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 15.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 113 0, 0.0 65,-0.7 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 132.4 -17.9 5.0 -1.2 2 3 A Q E +A 65 0A 70 63,-0.3 63,-0.3 67,-0.1 2,-0.3 -0.890 360.0 155.6-110.0 126.2 -15.4 3.7 1.4 3 4 A Q E -A 64 0A 97 61,-2.1 61,-2.7 -2,-0.5 2,-0.3 -0.912 15.6-169.5-132.5 160.8 -15.5 0.4 3.3 4 5 A K E -A 63 0A 78 -2,-0.3 2,-0.5 59,-0.3 59,-0.3 -0.982 14.5-154.2-154.0 141.7 -12.6 -1.5 4.9 5 6 A V E -A 62 0A 45 57,-2.4 57,-3.0 -2,-0.3 2,-0.3 -0.975 22.9-136.5-118.2 118.2 -12.1 -4.9 6.5 6 7 A E E +A 61 0A 104 -2,-0.5 55,-0.3 55,-0.4 2,-0.3 -0.605 31.0 167.6 -80.7 137.1 -9.2 -5.2 9.0 7 8 A V E -A 60 0A 3 53,-2.5 53,-1.8 -2,-0.3 2,-0.6 -0.920 43.5 -98.6-138.5 158.6 -7.0 -8.3 8.7 8 9 A R E -A 59 0A 102 51,-0.3 2,-2.5 -2,-0.3 51,-0.3 -0.770 38.8-126.2 -85.4 125.7 -3.7 -9.3 10.1 9 10 A L + 0 0 0 49,-2.6 48,-1.1 -2,-0.6 3,-0.3 -0.407 45.1 160.5 -72.0 79.0 -1.1 -8.5 7.5 10 11 A K S S+ 0 0 46 -2,-2.5 -1,-0.2 70,-0.4 71,-0.2 0.813 81.2 52.3 -70.7 -26.3 0.5 -12.0 7.4 11 12 A T S > S- 0 0 0 69,-2.3 3,-1.0 -3,-0.2 -1,-0.3 0.813 89.1-160.0 -64.3 -38.3 1.8 -10.9 3.9 12 13 A G T 3 - 0 0 0 -3,-0.3 44,-0.4 1,-0.2 -2,-0.1 0.778 46.7-101.0 43.0 31.9 3.2 -7.7 5.5 13 14 A L T 3 + 0 0 2 1,-0.1 41,-0.2 42,-0.1 -1,-0.2 0.670 69.2 157.1 34.0 54.5 3.1 -6.5 1.9 14 15 A Q < - 0 0 138 -3,-1.0 -1,-0.1 39,-0.1 -2,-0.1 0.937 64.9 -85.8 -72.8 -47.3 6.8 -7.0 1.3 15 16 A A S > S+ 0 0 57 -4,-0.2 4,-2.4 34,-0.0 5,-0.4 0.027 108.1 73.5 176.0 -55.6 6.4 -7.2 -2.5 16 17 A R H > S+ 0 0 155 2,-0.2 4,-0.6 1,-0.2 -5,-0.0 0.938 119.7 12.2 -51.9 -65.5 5.6 -10.6 -4.0 17 18 A P H >> S+ 0 0 8 0, 0.0 4,-2.1 0, 0.0 3,-0.6 0.916 126.8 58.7 -76.7 -49.3 1.9 -10.8 -3.0 18 19 A A H 3> S+ 0 0 0 1,-0.3 4,-3.0 2,-0.3 5,-0.2 0.748 98.4 58.0 -61.9 -27.8 1.5 -7.2 -1.9 19 20 A A H 3X S+ 0 0 57 -4,-2.4 4,-2.7 2,-0.2 -1,-0.3 0.936 110.9 44.7 -63.1 -42.5 2.4 -5.8 -5.2 20 21 A L H X S+ 0 0 2 -4,-2.1 4,-3.1 2,-0.2 3,-0.5 0.974 110.5 41.2 -52.1 -65.7 -2.5 -6.6 -3.5 22 23 A V H 3X S+ 0 0 25 -4,-3.0 4,-2.7 1,-0.3 -2,-0.2 0.898 114.8 55.2 -47.6 -48.0 -1.9 -3.0 -4.5 23 24 A Q H 3X S+ 0 0 73 -4,-2.7 4,-0.8 -5,-0.2 -1,-0.3 0.854 113.0 40.0 -55.2 -42.8 -2.5 -4.1 -8.1 24 25 A E H XX S+ 0 0 18 -4,-2.6 4,-2.5 -3,-0.5 3,-0.7 0.947 115.2 48.7 -75.8 -52.7 -6.0 -5.6 -7.1 25 26 A A H 3<>S+ 0 0 0 -4,-3.1 5,-0.6 1,-0.3 -2,-0.2 0.899 115.8 49.0 -48.6 -42.5 -7.1 -2.9 -4.8 26 27 A N H 3<5S+ 0 0 70 -4,-2.7 -1,-0.3 -5,-0.4 -2,-0.3 0.708 102.3 59.0 -65.6 -33.7 -6.0 -0.7 -7.7 27 28 A R H <<5S+ 0 0 145 -4,-0.8 -2,-0.2 -3,-0.7 -1,-0.2 0.947 94.0 81.0 -61.0 -49.4 -8.0 -2.8 -10.2 28 29 A F T <5S- 0 0 18 -4,-2.5 2,-2.4 1,-0.1 4,-0.2 -0.367 93.0-128.5 -54.1 125.7 -10.9 -1.8 -8.1 29 30 A T T 5S+ 0 0 89 -2,-0.1 38,-2.8 2,-0.1 2,-0.3 -0.316 73.0 115.9 -79.3 56.9 -12.0 1.7 -9.0 30 31 A S E -BC 61 40A 22 26,-1.6 26,-2.7 -2,-0.3 3,-2.0 -0.892 19.2-137.3-121.4 100.1 -5.3 1.0 8.1 36 37 A K E > S-BC 60 39A 34 3,-2.4 3,-2.1 -2,-0.6 24,-0.3 -0.374 90.0 -36.1 -58.4 94.2 -3.0 -0.6 10.6 37 38 A D T 3 S- 0 0 111 22,-1.9 -1,-0.3 -2,-0.9 23,-0.2 0.838 138.6 -26.9 51.7 33.9 -5.5 -1.1 13.4 38 39 A G T < S+ 0 0 49 -3,-2.0 2,-2.2 21,-0.2 -1,-0.3 0.036 111.2 119.7 117.3 -25.2 -6.8 2.3 12.1 39 40 A K E < -C 36 0A 125 -3,-2.1 -3,-2.4 -4,-0.2 2,-0.2 -0.475 51.5-173.5 -73.5 76.5 -3.5 3.6 10.7 40 41 A K E +C 35 0A 87 -2,-2.2 -5,-0.3 -5,-0.4 2,-0.3 -0.484 18.9 160.5 -84.5 154.8 -4.9 3.9 7.2 41 42 A V E -C 34 0A 13 -7,-1.4 -7,-1.9 -2,-0.2 2,-0.9 -0.917 58.0 -67.4-154.0 163.4 -3.1 4.8 3.9 42 43 A N > - 0 0 54 -2,-0.3 3,-2.4 -9,-0.3 6,-0.9 -0.532 45.0-155.5 -66.6 106.4 -3.9 4.3 0.2 43 44 A A T 3 S+ 0 0 5 -2,-0.9 -10,-0.2 -11,-0.3 -1,-0.2 0.794 94.1 48.0 -49.1 -42.5 -3.7 0.5 -0.0 44 45 A K T 3 S+ 0 0 41 -12,-0.5 -1,-0.3 -19,-0.1 2,-0.2 0.386 105.9 82.7 -83.1 -2.3 -2.9 0.7 -3.7 45 46 A S S <> S- 0 0 47 -3,-2.4 4,-2.8 -13,-0.2 3,-0.3 -0.630 94.8 -99.3-101.9 164.8 -0.3 3.4 -3.1 46 47 A I H >>S+ 0 0 113 1,-0.3 4,-2.2 2,-0.2 5,-0.6 0.885 124.2 39.8 -46.1 -56.8 3.4 3.4 -2.0 47 48 A M H 4>S+ 0 0 102 3,-0.2 5,-2.3 1,-0.2 4,-0.4 0.757 111.0 59.6 -72.4 -24.8 2.6 4.1 1.7 48 49 A G H 4>S+ 0 0 0 -6,-0.9 5,-3.2 -3,-0.3 -5,-0.2 0.965 121.7 25.3 -64.8 -49.8 -0.4 1.8 1.6 49 50 A L H <>S+ 0 0 21 -4,-2.8 5,-2.7 -7,-0.4 6,-0.2 0.992 131.4 34.8 -70.6 -76.9 1.9 -1.0 0.7 50 51 A M T <5S+ 0 0 116 -4,-2.2 -3,-0.2 3,-0.2 -2,-0.1 0.762 128.8 33.2 -56.2 -39.3 5.4 -0.1 2.0 51 52 A S T S- B 0 30A 4 -65,-0.7 3,-1.7 -2,-0.4 -36,-0.4 -0.799 102.6 -57.8-149.6-168.5 -14.5 3.2 -4.9 67 68 A E T 3 S+ 0 0 155 -38,-2.8 2,-0.2 1,-0.3 -37,-0.2 0.838 139.5 37.9 -50.9 -40.4 -16.8 1.5 -7.4 68 69 A D T 3> S+ 0 0 54 1,-0.2 4,-2.7 -43,-0.1 5,-0.4 -0.479 80.4 140.8-110.5 51.6 -15.5 -1.8 -5.9 69 70 A E H <> S+ 0 0 32 -3,-1.7 4,-2.8 -2,-0.2 5,-0.3 0.992 79.3 30.0 -50.6 -79.7 -15.4 -0.5 -2.3 70 71 A Q H > S+ 0 0 90 1,-0.2 4,-2.5 -4,-0.2 5,-0.3 0.875 124.1 50.7 -46.5 -51.2 -16.7 -3.6 -0.7 71 72 A E H > S+ 0 0 86 2,-0.2 4,-2.2 1,-0.2 5,-0.3 0.938 116.4 38.9 -54.6 -57.7 -15.2 -5.8 -3.4 72 73 A A H X S+ 0 0 0 -4,-2.7 4,-2.9 2,-0.2 5,-0.4 0.960 116.6 48.8 -59.6 -59.1 -11.7 -4.3 -3.1 73 74 A L H X S+ 0 0 1 -4,-2.8 4,-2.6 -5,-0.4 5,-0.3 0.903 114.9 44.4 -51.4 -49.9 -11.6 -3.8 0.6 74 75 A E H X S+ 0 0 83 -4,-2.5 4,-2.7 -5,-0.3 -1,-0.2 0.944 118.3 39.2 -67.8 -50.6 -12.6 -7.4 1.4 75 76 A K H X S+ 0 0 60 -4,-2.2 4,-3.1 -5,-0.3 -1,-0.2 0.901 117.9 49.5 -70.7 -37.2 -10.5 -9.3 -1.0 76 77 A L H X S+ 0 0 0 -4,-2.9 4,-1.3 -5,-0.3 -2,-0.2 0.950 115.5 41.9 -65.2 -49.2 -7.5 -7.1 -0.6 77 78 A A H >X S+ 0 0 0 -4,-2.6 4,-1.0 -5,-0.4 3,-0.6 0.937 114.6 53.9 -60.6 -43.1 -7.6 -7.3 3.2 78 79 A A H >X S+ 0 0 27 -4,-2.7 3,-1.4 -5,-0.3 4,-1.2 0.953 103.6 56.6 -49.0 -55.9 -8.4 -11.0 2.8 79 80 A Y H 3X S+ 0 0 21 -4,-3.1 4,-0.7 1,-0.3 3,-0.3 0.775 100.3 58.6 -45.7 -40.1 -5.3 -11.4 0.7 80 81 A V H << S+ 0 0 0 -4,-1.3 -69,-2.3 -3,-0.6 -70,-0.4 0.832 122.6 20.6 -65.8 -36.4 -3.1 -10.0 3.4 81 82 A Q H << S+ 0 0 81 -3,-1.4 -1,-0.2 -4,-1.0 -2,-0.2 0.323 107.8 80.3-117.1 6.1 -4.0 -12.7 6.0 82 83 A E H < S+ 0 0 107 -4,-1.2 -3,-0.1 -3,-0.3 -2,-0.1 0.819 102.6 7.2 -92.2 -33.7 -5.4 -15.5 3.8 83 84 A E < 0 0 75 -4,-0.7 -3,-0.1 -5,-0.2 -4,-0.0 0.503 360.0 360.0-108.9-105.9 -2.4 -17.4 2.4 84 85 A V 0 0 124 -5,-0.1 -73,-0.2 -73,-0.0 -3,-0.1 -0.807 360.0 360.0-164.6 360.0 1.3 -16.7 3.5