==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 26-SEP-01 1K1Z . COMPND 2 MOLECULE: VAV; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.OGURA,K.NAGATA,M.HORIUCHI,E.EBISUI,T.HASUDA,S.YUZAWA, . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6003.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 306 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 35.3 9.7 -13.7 -17.1 2 2 A A >> + 0 0 45 3,-0.0 3,-1.3 4,-0.0 4,-1.0 -0.186 360.0 155.7-114.2 38.9 10.4 -10.1 -15.9 3 3 A Q T 34 S+ 0 0 165 1,-0.3 0, 0.0 2,-0.2 0, 0.0 -0.421 71.6 3.9 -68.7 139.1 12.8 -11.0 -13.1 4 4 A D T 34 S+ 0 0 150 -2,-0.1 -1,-0.3 1,-0.1 4,-0.0 0.817 122.8 76.6 55.2 32.2 15.2 -8.2 -12.1 5 5 A K T <4 S+ 0 0 169 -3,-1.3 -2,-0.2 3,-0.0 -1,-0.1 0.413 100.6 28.4-141.9 -17.2 13.4 -6.0 -14.6 6 6 A K S < S+ 0 0 138 -4,-1.0 2,-0.8 1,-0.1 -3,-0.1 0.599 100.6 84.9-119.3 -27.4 10.1 -5.0 -12.8 7 7 A R + 0 0 146 -5,-0.4 2,-0.5 2,-0.0 -1,-0.1 -0.718 54.8 174.2 -84.6 110.1 11.3 -5.2 -9.2 8 8 A N + 0 0 99 -2,-0.8 2,-0.5 -3,-0.1 4,-0.1 -0.950 10.4 172.7-122.9 113.4 12.8 -1.9 -8.2 9 9 A E + 0 0 131 -2,-0.5 2,-0.2 2,-0.1 -2,-0.0 -0.754 26.7 131.5-121.0 83.8 13.9 -1.3 -4.6 10 10 A L S S- 0 0 131 -2,-0.5 -1,-0.1 0, 0.0 -2,-0.0 -0.576 94.3 -39.4-133.3 71.0 15.8 2.0 -4.4 11 11 A G S S+ 0 0 84 1,-0.3 -2,-0.1 -2,-0.2 0, 0.0 0.649 95.1 146.6 85.5 16.2 14.3 4.1 -1.5 12 12 A L - 0 0 68 1,-0.1 -1,-0.3 -4,-0.1 0, 0.0 -0.723 52.6-110.1 -89.9 133.2 10.8 3.1 -2.3 13 13 A P - 0 0 53 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.232 35.9-168.0 -59.7 146.8 8.3 2.7 0.6 14 14 A K + 0 0 60 63,-0.3 62,-1.3 30,-0.2 63,-0.7 -1.000 9.1 177.9-142.3 138.7 7.2 -0.8 1.5 15 15 A M E -AB 43 75A 19 28,-1.0 28,-1.9 -2,-0.3 2,-0.5 -0.988 22.8-133.4-141.1 150.0 4.4 -2.1 3.8 16 16 A E E -AB 42 74A 57 58,-2.8 58,-1.8 -2,-0.3 26,-0.2 -0.908 26.7-125.3-108.1 122.3 3.1 -5.6 4.8 17 17 A V E - B 0 73A 3 24,-1.8 23,-0.6 -2,-0.5 56,-0.2 -0.337 20.4-172.5 -64.2 141.9 -0.7 -6.1 4.7 18 18 A F + 0 0 137 54,-1.0 2,-0.2 21,-0.2 55,-0.1 0.699 67.4 52.5-105.4 -30.3 -2.2 -7.4 8.0 19 19 A Q S S- 0 0 15 53,-0.7 2,-0.5 19,-0.1 -2,-0.0 -0.571 77.0-127.0-104.0 169.3 -5.8 -8.0 6.7 20 20 A E + 0 0 108 -2,-0.2 2,-0.4 18,-0.2 18,-0.2 -0.812 33.3 172.8-121.2 90.4 -7.2 -9.9 3.8 21 21 A Y B -E 37 0B 61 16,-0.9 16,-1.4 -2,-0.5 2,-0.2 -0.799 18.3-167.9-100.4 138.9 -9.5 -7.8 1.6 22 22 A Y S S- 0 0 108 2,-0.4 14,-0.2 -2,-0.4 -1,-0.0 -0.494 76.5 -56.0-122.1 61.4 -10.9 -8.9 -1.7 23 23 A G S S+ 0 0 25 12,-0.4 11,-0.1 1,-0.2 13,-0.1 0.555 100.7 146.2 80.1 7.6 -12.4 -5.8 -3.2 24 24 A I + 0 0 109 1,-0.3 -2,-0.4 2,-0.1 -1,-0.2 -0.998 53.3 25.3-135.7 132.9 -14.5 -5.3 -0.1 25 25 A P S S- 0 0 62 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.470 90.1-141.7 -85.6 145.0 -15.4 -2.9 1.2 26 26 A P - 0 0 83 0, 0.0 7,-0.1 0, 0.0 -2,-0.1 -0.235 28.5 -93.3 -64.1 153.6 -15.2 -0.7 -1.9 27 27 A P - 0 0 20 0, 0.0 4,-0.2 0, 0.0 2,-0.1 -0.353 43.8-105.4 -68.9 147.6 -13.9 2.9 -1.6 28 28 A P S S- 0 0 64 0, 0.0 3,-0.1 0, 0.0 4,-0.1 -0.435 77.7 -10.2 -74.9 146.9 -16.5 5.8 -1.1 29 29 A G S S- 0 0 70 1,-0.2 2,-1.4 -2,-0.1 3,-0.4 -0.020 115.1 -37.0 60.1-169.5 -17.3 8.1 -4.0 30 30 A A S S+ 0 0 112 1,-0.2 -1,-0.2 3,-0.0 3,-0.1 -0.652 90.2 121.6 -90.3 83.0 -15.4 8.2 -7.3 31 31 A F S S- 0 0 84 -2,-1.4 2,-0.2 1,-0.3 -1,-0.2 0.742 72.9 -83.1-109.0 -40.4 -11.8 7.6 -6.0 32 32 A G - 0 0 43 -3,-0.4 -1,-0.3 -5,-0.1 35,-0.2 -0.841 53.3 -49.0 152.2 171.8 -10.8 4.5 -7.9 33 33 A G - 0 0 57 -2,-0.2 34,-0.8 32,-0.1 2,-0.1 -0.253 57.7-108.4 -69.2 159.1 -10.9 0.7 -7.9 34 34 A F - 0 0 41 32,-0.2 2,-0.4 -11,-0.1 -1,-0.1 -0.430 25.8-132.7 -85.7 162.5 -10.0 -1.4 -4.9 35 35 A L - 0 0 3 32,-0.4 2,-0.7 -2,-0.1 -12,-0.4 -0.935 17.7-116.5-119.9 141.0 -6.9 -3.5 -4.5 36 36 A R - 0 0 140 -2,-0.4 2,-0.4 -14,-0.2 -14,-0.2 -0.638 36.2-170.8 -77.5 112.6 -6.6 -7.1 -3.3 37 37 A L B -E 21 0B 0 -16,-1.4 -16,-0.9 -2,-0.7 -14,-0.0 -0.891 6.0-177.9-109.7 135.4 -4.6 -7.1 -0.1 38 38 A N > - 0 0 48 -2,-0.4 3,-1.8 -18,-0.2 2,-1.2 -0.978 41.6 -94.6-132.3 144.5 -3.3 -10.3 1.6 39 39 A P T 3 S+ 0 0 83 0, 0.0 -21,-0.2 0, 0.0 -19,-0.1 -0.361 117.7 31.0 -58.5 92.4 -1.4 -10.8 4.9 40 40 A G T 3 S+ 0 0 54 -2,-1.2 2,-0.4 -23,-0.6 -22,-0.1 0.458 87.3 124.6 133.0 12.6 2.1 -10.9 3.6 41 41 A D < - 0 0 31 -3,-1.8 -24,-1.8 -24,-0.2 2,-0.5 -0.868 51.8-137.8-105.8 133.9 2.0 -8.6 0.6 42 42 A I E -A 16 0A 36 -2,-0.4 18,-2.0 -26,-0.2 2,-0.4 -0.760 22.1-172.8 -91.8 129.4 4.3 -5.6 0.2 43 43 A V E -AC 15 59A 2 -28,-1.9 -28,-1.0 -2,-0.5 2,-0.4 -0.959 16.2-136.2-125.1 141.6 2.8 -2.4 -1.1 44 44 A E E - C 0 58A 36 14,-2.3 14,-1.7 -2,-0.4 2,-1.1 -0.777 26.7-113.2 -97.7 138.1 4.4 0.9 -2.1 45 45 A L E + C 0 57A 64 -2,-0.4 12,-0.2 12,-0.2 3,-0.2 -0.553 41.7 169.1 -71.4 99.5 3.0 4.3 -1.1 46 46 A T E - 0 0 47 -2,-1.1 2,-0.4 10,-0.7 11,-0.2 0.965 68.1 -0.1 -75.8 -56.8 1.9 5.8 -4.4 47 47 A K E - C 0 56A 139 9,-1.4 9,-2.3 2,-0.0 2,-0.4 -0.971 66.6-174.1-141.7 123.4 -0.0 8.8 -3.1 48 48 A A - 0 0 65 -2,-0.4 2,-0.2 7,-0.2 7,-0.1 -0.927 4.5-169.5-119.5 142.2 -0.6 9.8 0.5 49 49 A E - 0 0 100 -2,-0.4 -2,-0.0 5,-0.2 0, 0.0 -0.739 20.3-153.5-122.9 171.7 -2.8 12.6 1.9 50 50 A A S S+ 0 0 97 -2,-0.2 -1,-0.1 3,-0.0 0, 0.0 0.732 96.6 43.3-112.2 -42.3 -3.4 14.3 5.2 51 51 A E S S+ 0 0 188 2,-0.0 2,-0.4 3,-0.0 -2,-0.0 0.246 102.9 87.5 -89.8 12.6 -6.9 15.6 5.0 52 52 A H - 0 0 71 1,-0.1 -3,-0.2 2,-0.1 0, 0.0 -0.943 63.9-155.0-117.4 134.7 -8.0 12.3 3.5 53 53 A N S S+ 0 0 138 -2,-0.4 2,-0.4 16,-0.1 17,-0.1 0.345 82.5 65.0 -85.0 6.5 -9.1 9.2 5.5 54 54 A W - 0 0 63 15,-0.1 2,-0.3 16,-0.1 -5,-0.2 -0.977 64.7-165.3-132.2 144.3 -8.1 7.1 2.5 55 55 A W E - D 0 68A 46 13,-1.5 13,-2.6 -2,-0.4 2,-0.4 -0.901 14.2-131.0-128.0 156.8 -4.7 6.5 0.8 56 56 A E E +CD 47 67A 44 -9,-2.3 -9,-1.4 -2,-0.3 -10,-0.7 -0.843 30.9 160.3-109.4 144.8 -3.5 5.0 -2.5 57 57 A G E -CD 45 66A 0 9,-1.9 9,-1.6 -2,-0.4 2,-0.4 -0.883 32.6-120.8-149.2 179.5 -0.9 2.3 -3.0 58 58 A R E -CD 44 65A 100 -14,-1.7 -14,-2.3 -2,-0.3 2,-0.3 -0.954 19.3-142.8-136.3 116.6 0.5 -0.3 -5.4 59 59 A N E >> -CD 43 64A 0 5,-2.0 4,-1.3 -2,-0.4 5,-0.6 -0.559 2.5-152.8 -77.6 136.2 0.7 -4.0 -4.6 60 60 A T T 45S+ 0 0 68 -18,-2.0 -1,-0.1 -2,-0.3 -17,-0.1 0.623 95.8 53.4 -81.9 -14.1 3.8 -5.8 -6.0 61 61 A A T 45S+ 0 0 71 -19,-0.3 -1,-0.2 3,-0.1 -18,-0.1 0.861 122.6 25.1 -86.7 -41.3 1.9 -9.1 -6.1 62 62 A T T 45S- 0 0 56 2,-0.2 -2,-0.2 -26,-0.2 3,-0.1 0.590 94.3-139.4 -97.5 -15.0 -1.1 -7.9 -8.1 63 63 A N T <5 + 0 0 104 -4,-1.3 2,-0.3 1,-0.2 -3,-0.2 0.889 63.7 113.8 56.3 42.2 0.8 -5.0 -9.8 64 64 A E E < -D 59 0A 128 -5,-0.6 -5,-2.0 -28,-0.1 2,-0.3 -0.964 61.7-125.3-141.2 156.5 -2.2 -2.7 -9.4 65 65 A V E +D 58 0A 63 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.775 34.5 155.4-104.9 148.7 -3.1 0.4 -7.5 66 66 A G E -D 57 0A 1 -9,-1.6 -9,-1.9 -2,-0.3 2,-0.4 -0.972 39.8 -95.5-160.2 171.5 -6.1 0.9 -5.1 67 67 A W E +D 56 0A 28 -34,-0.8 -32,-0.4 -2,-0.3 -11,-0.2 -0.799 49.5 141.1-100.3 138.3 -7.5 2.8 -2.2 68 68 A F E -D 55 0A 6 -13,-2.6 -13,-1.5 -2,-0.4 2,-0.1 -0.973 50.5 -84.4-167.9 157.3 -7.3 1.5 1.4 69 69 A P - 0 0 22 0, 0.0 4,-0.2 0, 0.0 -15,-0.1 -0.385 24.8-140.6 -70.3 145.7 -6.7 2.7 5.0 70 70 A C S > S+ 0 0 44 1,-0.2 3,-0.8 2,-0.2 -16,-0.1 0.771 102.0 58.1 -75.7 -27.4 -3.1 3.1 6.3 71 71 A N T 3 S+ 0 0 129 1,-0.2 -1,-0.2 3,-0.1 0, 0.0 0.817 92.9 66.5 -71.9 -31.7 -4.0 1.7 9.7 72 72 A R T 3 S+ 0 0 112 -54,-0.1 -54,-1.0 -55,-0.0 -53,-0.7 0.646 107.1 48.9 -64.4 -13.2 -5.2 -1.6 8.1 73 73 A V E < S-B 17 0A 11 -3,-0.8 -56,-0.2 -4,-0.2 -5,-0.0 -0.832 72.8-144.1-125.7 164.1 -1.6 -2.2 7.1 74 74 A H E -B 16 0A 83 -58,-1.8 -58,-2.8 -2,-0.3 -3,-0.1 -0.993 31.5-100.1-131.9 136.0 1.8 -2.0 8.9 75 75 A P E -B 15 0A 33 0, 0.0 -60,-0.3 0, 0.0 3,-0.1 -0.237 22.5-146.8 -54.2 132.8 5.2 -0.9 7.5 76 76 A Y S S- 0 0 126 -62,-1.3 2,-0.3 1,-0.3 -61,-0.2 0.904 79.3 -0.9 -68.5 -43.0 7.4 -3.8 6.5 77 77 A V 0 0 84 -63,-0.7 -63,-0.3 1,-0.1 -1,-0.3 -0.992 360.0 360.0-151.9 142.3 10.6 -2.0 7.5 78 78 A H 0 0 216 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.253 360.0 360.0-141.6 360.0 11.5 1.4 9.0