==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 20-FEB-08 2K14 . COMPND 2 MOLECULE: YUAF PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR C.A.WALKER,M.HINDERHOFER,D.J.WITTE,W.BOOS,H.M.MOLLER . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5583.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 73.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 27.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 19.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G >> 0 0 98 0, 0.0 4,-1.3 0, 0.0 3,-1.1 0.000 360.0 360.0 360.0 -2.2 19.2 15.7 -11.0 2 2 A S H 3> + 0 0 70 1,-0.3 4,-2.6 2,-0.2 5,-0.2 0.835 360.0 61.8 -55.8 -35.3 17.3 15.5 -7.6 3 3 A H H 3> S+ 0 0 145 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.836 103.4 49.8 -61.5 -33.3 13.9 15.2 -9.4 4 4 A M H <> S+ 0 0 143 -3,-1.1 4,-2.3 2,-0.2 -1,-0.2 0.866 110.2 50.0 -73.1 -35.8 15.1 11.9 -11.0 5 5 A L H X S+ 0 0 126 -4,-1.3 4,-2.1 2,-0.2 -2,-0.2 0.910 112.0 47.9 -67.4 -41.0 16.3 10.6 -7.6 6 6 A E H X S+ 0 0 108 -4,-2.6 4,-2.4 2,-0.2 -2,-0.2 0.925 111.8 50.0 -62.9 -43.8 12.8 11.5 -6.1 7 7 A S H X S+ 0 0 53 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.910 110.2 50.8 -60.3 -41.2 11.2 9.8 -9.1 8 8 A S H X S+ 0 0 54 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.882 110.4 48.9 -64.8 -39.0 13.4 6.7 -8.5 9 9 A A H X S+ 0 0 61 -4,-2.1 4,-2.1 2,-0.2 -2,-0.2 0.906 112.1 48.4 -66.4 -41.7 12.3 6.7 -4.7 10 10 A E H X S+ 0 0 135 -4,-2.4 4,-2.3 2,-0.2 -2,-0.2 0.906 112.4 48.5 -65.3 -40.8 8.6 7.0 -5.7 11 11 A E H X S+ 0 0 135 -4,-2.5 4,-1.9 2,-0.2 -2,-0.2 0.871 110.3 52.2 -66.3 -35.3 9.0 4.1 -8.3 12 12 A S H X S+ 0 0 69 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.897 109.6 49.0 -65.9 -38.6 10.8 2.0 -5.5 13 13 A L H X S+ 0 0 76 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.909 108.5 53.1 -67.7 -39.1 7.8 2.7 -3.2 14 14 A A H X S+ 0 0 39 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.892 110.0 48.6 -61.2 -37.8 5.4 1.6 -6.0 15 15 A Y H X S+ 0 0 169 -4,-1.9 4,-1.6 2,-0.2 -2,-0.2 0.915 109.7 51.5 -66.4 -42.0 7.5 -1.6 -6.2 16 16 A R H X S+ 0 0 175 -4,-2.3 4,-0.6 2,-0.2 -2,-0.2 0.880 112.1 47.4 -60.4 -39.4 7.3 -2.1 -2.4 17 17 A E H >< S+ 0 0 7 -4,-2.4 3,-1.2 1,-0.2 4,-0.3 0.915 107.5 55.1 -67.2 -42.7 3.5 -1.6 -2.7 18 18 A D H >< S+ 0 0 61 -4,-2.4 3,-1.3 1,-0.3 -2,-0.2 0.797 97.5 64.7 -63.5 -26.1 3.3 -4.2 -5.6 19 19 A D H >< S+ 0 0 91 -4,-1.6 3,-1.4 1,-0.2 -1,-0.3 0.825 90.1 66.8 -61.2 -30.4 5.0 -6.7 -3.3 20 20 A L G X< S+ 0 0 37 -3,-1.2 3,-1.8 -4,-0.6 48,-0.3 0.653 76.8 86.0 -65.3 -14.9 1.8 -6.5 -1.2 21 21 A R G < S+ 0 0 84 -3,-1.3 -1,-0.2 -4,-0.3 -2,-0.2 0.768 82.2 60.5 -56.2 -26.4 -0.0 -8.2 -4.1 22 22 A G G < S+ 0 0 71 -3,-1.4 2,-0.3 -4,-0.2 -1,-0.3 0.204 101.2 72.9 -84.8 13.5 1.1 -11.6 -2.6 23 23 A R S < S- 0 0 112 -3,-1.8 45,-1.6 45,-0.2 2,-0.2 -0.872 77.2-112.4-130.7 159.3 -0.8 -10.9 0.7 24 24 A L E -A 67 0A 47 -2,-0.3 18,-2.4 43,-0.2 19,-0.3 -0.515 32.9-169.9 -80.9 158.9 -4.3 -10.7 2.2 25 25 A G E -AB 66 41A 0 41,-3.1 41,-2.3 16,-0.3 2,-0.4 -0.751 18.6-122.4-140.0-174.7 -5.9 -7.4 3.5 26 26 A K E -AB 65 40A 54 14,-2.5 14,-1.6 39,-0.2 2,-0.3 -0.983 21.5-132.3-145.4 114.3 -8.9 -6.1 5.5 27 27 A V E + B 0 39A 0 37,-1.7 36,-2.6 -2,-0.4 37,-0.4 -0.559 27.1 168.8 -74.5 134.3 -11.6 -3.6 4.2 28 28 A I E S+ 0 0 62 10,-2.3 2,-0.4 1,-0.3 11,-0.2 0.465 72.3 42.1-123.8 -10.8 -12.4 -0.6 6.5 29 29 A T E S- B 0 38A 76 9,-1.5 9,-1.9 32,-0.1 -1,-0.3 -0.985 101.9 -97.8-137.4 127.5 -14.5 1.6 4.0 30 30 A A - 0 0 47 -2,-0.4 31,-0.2 7,-0.2 6,-0.1 -0.065 28.0-158.9 -55.2 142.4 -17.0 -0.2 1.7 31 31 A V B -F 60 0B 0 29,-2.5 29,-2.4 6,-0.1 6,-0.1 -0.913 14.8-159.3-123.1 92.4 -16.0 -1.1 -1.9 32 32 A P > - 0 0 48 0, 0.0 3,-1.9 0, 0.0 22,-0.5 -0.209 39.8 -84.5 -73.6 173.5 -19.2 -1.7 -4.1 33 33 A V T 3 S+ 0 0 68 1,-0.3 26,-0.1 24,-0.2 20,-0.0 0.532 128.0 15.4 -56.9 -14.8 -19.3 -3.6 -7.4 34 34 A D T 3 S+ 0 0 141 23,-0.1 -1,-0.3 2,-0.0 2,-0.2 0.005 119.0 76.8-145.8 23.4 -18.1 -0.6 -9.5 35 35 A G < - 0 0 13 -3,-1.9 19,-0.7 0, 0.0 2,-0.3 -0.521 68.8 -99.2-132.3-168.1 -16.8 1.8 -6.7 36 36 A F E + C 0 53A 154 -2,-0.2 17,-0.2 17,-0.2 2,-0.2 -0.932 36.9 140.6-128.8 145.5 -14.0 2.7 -4.3 37 37 A G E - C 0 52A 6 15,-2.3 15,-2.2 -2,-0.3 2,-0.3 -0.585 44.2 -76.3-151.6-145.5 -13.3 2.3 -0.5 38 38 A E E +BC 29 51A 56 -9,-1.9 -10,-2.3 13,-0.3 -9,-1.5 -0.981 33.4 178.5-140.5 149.5 -10.3 1.5 1.8 39 39 A V E -BC 27 50A 0 11,-2.6 11,-2.7 -2,-0.3 2,-0.3 -0.938 12.9-155.4-143.9 157.4 -8.2 -1.5 2.9 40 40 A V E -B 26 0A 22 -14,-1.6 -14,-2.5 -2,-0.3 9,-0.1 -0.969 32.6-107.9-128.9 147.5 -5.1 -2.5 5.1 41 41 A I E -B 25 0A 8 7,-0.4 -16,-0.3 -2,-0.3 6,-0.1 -0.440 39.7-104.6 -69.6 152.2 -2.8 -5.5 4.6 42 42 A E S S+ 0 0 86 -18,-2.4 2,-1.5 1,-0.2 3,-0.2 0.648 111.2 83.4 -59.9 -15.2 -3.3 -8.2 7.3 43 43 A G > + 0 0 43 -19,-0.3 3,-2.6 1,-0.2 -1,-0.2 -0.287 59.8 162.8 -74.7 45.8 -0.0 -7.1 9.1 44 44 A I T 3 + 0 0 117 -2,-1.5 3,-0.4 1,-0.3 -1,-0.2 0.656 63.6 59.7 -49.9 -26.0 -2.2 -4.4 10.8 45 45 A G T 3 S+ 0 0 85 -3,-0.2 -1,-0.3 1,-0.2 -2,-0.1 0.488 121.8 22.6 -79.0 -5.6 0.4 -3.7 13.6 46 46 A G S < S+ 0 0 73 -3,-2.6 2,-0.2 2,-0.0 -2,-0.2 0.048 109.2 80.3-152.7 28.2 3.1 -2.6 11.0 47 47 A T - 0 0 50 -3,-0.4 2,-0.3 -4,-0.2 -7,-0.0 -0.783 63.6-123.5-136.2 174.4 1.2 -1.6 7.7 48 48 A I - 0 0 128 -2,-0.2 -7,-0.4 -9,-0.0 2,-0.1 -0.961 25.6-111.1-130.2 138.4 -0.7 1.5 6.2 49 49 A S - 0 0 67 -2,-0.3 2,-0.3 -9,-0.1 -9,-0.2 -0.360 35.6-177.8 -69.0 149.2 -4.2 1.8 4.8 50 50 A K E -C 39 0A 50 -11,-2.7 -11,-2.6 -2,-0.1 25,-0.1 -0.945 33.8 -86.7-141.9 158.9 -4.8 2.5 1.0 51 51 A S E -Cd 38 75A 43 23,-1.4 25,-2.5 -2,-0.3 2,-0.3 -0.369 47.8-158.0 -65.8 150.7 -7.7 3.1 -1.4 52 52 A A E -Cd 37 76A 0 -15,-2.2 -15,-2.3 23,-0.2 2,-0.3 -0.983 15.0-164.9-140.4 146.2 -9.3 -0.1 -2.8 53 53 A V E -Cd 36 77A 31 23,-2.2 25,-2.9 -2,-0.3 2,-1.1 -0.920 34.5-105.1-129.2 154.2 -11.5 -1.3 -5.8 54 54 A S E > - d 0 78A 12 -19,-0.7 3,-1.7 -22,-0.5 25,-0.2 -0.634 30.9-175.5 -84.5 92.2 -13.6 -4.5 -6.5 55 55 A F T 3 S+ 0 0 112 23,-1.9 -1,-0.2 -2,-1.1 24,-0.2 0.840 86.3 41.1 -57.0 -36.5 -11.5 -6.5 -9.0 56 56 A D T 3 S- 0 0 92 22,-0.6 -1,-0.3 2,-0.1 23,-0.1 0.072 117.8-107.4-100.8 18.6 -14.2 -9.2 -9.3 57 57 A N S < S+ 0 0 108 -3,-1.7 2,-0.3 1,-0.2 -24,-0.2 0.885 73.4 143.4 49.2 47.0 -17.2 -6.7 -9.4 58 58 A Q - 0 0 87 -26,-0.2 2,-0.5 -27,-0.0 -1,-0.2 -0.807 57.8-114.2-108.4 152.8 -18.3 -7.7 -5.8 59 59 A Q - 0 0 99 -2,-0.3 2,-0.5 -27,-0.2 -29,-0.0 -0.796 33.2-168.3 -85.8 124.3 -19.7 -5.6 -3.0 60 60 A I B -F 31 0B 3 -29,-2.4 -29,-2.5 -2,-0.5 3,-0.1 -0.882 4.6-167.7-125.5 91.8 -17.1 -5.6 -0.1 61 61 A S - 0 0 64 -2,-0.5 3,-0.5 -31,-0.2 -34,-0.2 -0.172 37.5 -68.0 -68.6 169.4 -18.4 -4.2 3.2 62 62 A Y S S+ 0 0 174 1,-0.2 -34,-0.2 -34,-0.2 -1,-0.2 -0.242 112.1 28.5 -50.8 142.3 -16.4 -3.2 6.3 63 63 A G S S+ 0 0 44 -36,-2.6 2,-0.3 1,-0.2 -1,-0.2 0.823 85.5 121.7 75.1 36.9 -14.7 -6.0 8.3 64 64 A T - 0 0 26 -3,-0.5 -37,-1.7 -37,-0.4 2,-0.5 -0.939 61.0-115.3-127.5 154.0 -14.0 -8.8 5.7 65 65 A T E -A 26 0A 17 -2,-0.3 17,-2.5 -39,-0.2 2,-0.3 -0.759 37.3-176.3 -94.4 128.2 -10.7 -10.4 4.5 66 66 A V E -A 25 0A 0 -41,-2.3 -41,-3.1 -2,-0.5 2,-0.5 -0.890 26.7-128.4-127.3 145.5 -9.7 -9.8 0.9 67 67 A L E -AE 24 79A 53 12,-2.7 2,-1.8 -2,-0.3 12,-1.3 -0.870 23.8-132.9 -92.9 128.2 -6.9 -10.9 -1.5 68 68 A V E + 0 0 0 -45,-1.6 10,-0.3 -2,-0.5 -45,-0.2 -0.575 34.8 173.1 -79.9 75.8 -5.1 -7.9 -3.1 69 69 A V E + 0 0 43 -2,-1.8 2,-0.3 8,-0.3 9,-0.2 0.705 62.8 10.6 -68.3 -23.3 -5.3 -9.5 -6.6 70 70 A D E - E 0 77A 58 7,-2.0 7,-2.9 -3,-0.1 2,-0.3 -0.958 69.6-150.8-147.9 165.2 -3.9 -6.4 -8.5 71 71 A I E + E 0 76A 16 -2,-0.3 2,-0.3 5,-0.3 5,-0.2 -0.999 14.1 173.2-145.2 139.1 -2.2 -3.1 -7.5 72 72 A N E > - E 0 75A 107 3,-1.2 3,-2.4 -2,-0.3 2,-0.3 -0.899 61.3 -57.1-135.0 161.4 -1.9 0.5 -8.8 73 73 A N T 3 S- 0 0 124 1,-0.3 -59,-0.1 -2,-0.3 3,-0.0 -0.167 119.5 -26.6 -50.2 99.2 -0.3 3.6 -7.1 74 74 A G T 3 S+ 0 0 20 -2,-0.3 -23,-1.4 1,-0.1 2,-0.4 0.532 124.9 96.7 67.8 11.0 -2.2 3.9 -3.7 75 75 A V E < -dE 51 72A 44 -3,-2.4 -3,-1.2 -25,-0.1 -23,-0.2 -0.848 59.1-168.1-134.0 85.5 -5.3 2.1 -5.4 76 76 A L E -dE 52 71A 2 -25,-2.5 -23,-2.2 -2,-0.4 2,-0.5 -0.507 15.7-137.3 -74.4 146.7 -5.3 -1.6 -4.6 77 77 A S E +dE 53 70A 20 -7,-2.9 -7,-2.0 -25,-0.2 -8,-0.3 -0.938 35.5 172.4-109.5 120.5 -7.6 -4.1 -6.5 78 78 A V E -d 54 0A 0 -25,-2.9 -23,-1.9 -2,-0.5 -22,-0.6 -0.808 25.2-168.1-131.7 163.1 -9.1 -6.6 -4.1 79 79 A T E - E 0 67A 28 -12,-1.3 -12,-2.7 -2,-0.3 2,-1.2 -0.977 41.9 -96.4-150.5 141.9 -11.7 -9.5 -3.8 80 80 A P + 0 0 53 0, 0.0 -14,-0.3 0, 0.0 -15,-0.1 -0.477 44.4 164.8 -70.4 94.8 -13.2 -11.2 -0.7 81 81 A H - 0 0 104 -2,-1.2 -15,-0.2 -16,-0.2 -57,-0.0 0.837 18.7-171.0 -68.4 -36.1 -11.1 -14.4 -0.2 82 82 A E - 0 0 112 -17,-2.5 -16,-0.1 1,-0.1 -15,-0.0 0.871 15.2-168.9 35.2 58.6 -12.4 -14.8 3.4 83 83 A P 0 0 50 0, 0.0 -1,-0.1 0, 0.0 -18,-0.1 -0.233 360.0 360.0 -68.9 161.9 -9.9 -17.7 4.3 84 84 A I 0 0 217 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.245 360.0 360.0 -57.2 360.0 -10.1 -19.9 7.4