==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 25-FEB-08 2K19 . COMPND 2 MOLECULE: PUTATIVE PISCICOLIN 126 IMMUNITY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CARNOBACTERIUM MALTAROMATICUM; . AUTHOR L.A.MARTIN-VISSCHER,T.SPRULES,L.J.GURSKY,J.C.VEDERAS . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7320.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 72 73.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 17.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 51.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 185 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 145.8 10.1 -7.7 -8.8 2 2 A G - 0 0 69 1,-0.1 2,-0.8 2,-0.1 0, 0.0 -0.699 360.0 -18.5 98.7-150.4 12.7 -10.4 -8.6 3 3 A K S S+ 0 0 202 -2,-0.3 -1,-0.1 2,-0.0 2,-0.1 -0.315 83.0 164.5 -91.9 50.9 12.4 -13.7 -6.7 4 4 A L + 0 0 92 -2,-0.8 2,-0.2 1,-0.0 -2,-0.1 -0.378 9.4 176.5 -69.3 146.4 9.5 -12.5 -4.6 5 5 A K - 0 0 156 -2,-0.1 2,-0.4 2,-0.0 -1,-0.0 -0.793 37.3 -69.9-139.6-178.5 7.5 -15.1 -2.7 6 6 A W + 0 0 207 -2,-0.2 2,-0.3 0, 0.0 13,-0.0 -0.660 53.9 163.0 -82.3 128.0 4.6 -15.4 -0.3 7 7 A F - 0 0 118 -2,-0.4 3,-0.1 1,-0.2 -2,-0.0 -0.959 29.3-160.9-149.9 126.9 5.4 -14.3 3.3 8 8 A S S S- 0 0 107 -2,-0.3 2,-0.3 1,-0.3 -1,-0.2 0.996 70.1 -32.7 -68.3 -66.3 3.1 -13.4 6.2 9 9 A G + 0 0 41 10,-0.0 2,-0.3 11,-0.0 -1,-0.3 -0.958 60.3 159.2-152.4 169.2 5.5 -11.4 8.4 10 10 A G - 0 0 47 -2,-0.3 6,-0.1 2,-0.2 -3,-0.0 -0.932 56.1 -71.8-169.5-168.8 9.1 -11.0 9.4 11 11 A K S S+ 0 0 189 -2,-0.3 2,-1.0 1,-0.1 3,-0.1 0.821 100.0 93.4 -73.3 -31.9 11.8 -8.8 10.9 12 12 A E > + 0 0 117 1,-0.2 4,-1.1 2,-0.1 -2,-0.2 -0.499 51.6 179.8 -67.2 100.2 11.9 -6.7 7.7 13 13 A R H > S+ 0 0 179 -2,-1.0 4,-1.3 2,-0.2 -1,-0.2 0.835 81.1 50.6 -70.6 -33.5 9.5 -3.8 8.5 14 14 A S H > S+ 0 0 52 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.942 112.5 43.7 -69.7 -49.2 10.1 -2.2 5.1 15 15 A N H > S+ 0 0 38 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.728 104.5 70.4 -68.4 -21.5 9.5 -5.4 3.1 16 16 A Q H X S+ 0 0 48 -4,-1.1 4,-2.2 2,-0.2 3,-0.4 0.977 97.9 45.0 -59.2 -59.6 6.5 -6.1 5.3 17 17 A A H X S+ 0 0 0 -4,-1.3 4,-2.6 1,-0.2 5,-0.3 0.905 110.7 55.6 -51.3 -46.6 4.4 -3.3 3.9 18 18 A E H X S+ 0 0 27 -4,-1.2 4,-1.6 1,-0.2 -1,-0.2 0.899 108.6 47.6 -54.2 -43.9 5.3 -4.2 0.4 19 19 A N H X S+ 0 0 24 -4,-2.0 4,-0.9 -3,-0.4 -1,-0.2 0.890 110.1 53.2 -65.5 -40.3 4.1 -7.8 1.0 20 20 A I H >X S+ 0 0 17 -4,-2.2 3,-1.7 1,-0.2 4,-1.0 0.966 106.9 49.6 -59.4 -56.1 0.9 -6.5 2.5 21 21 A I H 3X S+ 0 0 0 -4,-2.6 4,-1.8 1,-0.3 -1,-0.2 0.883 104.0 60.9 -50.8 -42.5 -0.0 -4.3 -0.5 22 22 A T H 3X S+ 0 0 54 -4,-1.6 4,-1.4 -5,-0.3 -1,-0.3 0.807 97.3 63.2 -56.1 -30.4 0.6 -7.2 -2.8 23 23 A D H XX S+ 0 0 80 -3,-1.7 3,-1.6 -4,-0.9 4,-1.1 0.992 104.0 41.0 -58.1 -68.5 -2.1 -9.1 -1.0 24 24 A L H 3X S+ 0 0 8 -4,-1.0 4,-2.5 1,-0.3 -1,-0.2 0.845 108.9 64.4 -49.3 -36.9 -5.0 -6.8 -1.9 25 25 A L H 3X S+ 0 0 20 -4,-1.8 4,-0.9 -5,-0.2 -1,-0.3 0.874 98.7 54.9 -55.7 -39.2 -3.5 -6.6 -5.4 26 26 A D H X< S+ 0 0 116 -3,-1.6 3,-1.7 -4,-1.4 -2,-0.2 0.989 114.3 35.4 -58.2 -65.9 -4.2 -10.3 -5.8 27 27 A D H 3< S+ 0 0 91 -4,-1.1 -1,-0.2 1,-0.3 -2,-0.2 0.791 113.2 62.8 -59.8 -27.9 -7.9 -10.3 -5.0 28 28 A L H >< S+ 0 0 6 -4,-2.5 3,-2.5 -5,-0.3 -1,-0.3 0.724 76.3 119.0 -70.0 -21.2 -8.1 -6.9 -6.8 29 29 A K T << S- 0 0 115 -3,-1.7 3,-0.1 -4,-0.9 -3,-0.0 -0.209 96.2 -11.7 -49.2 126.1 -7.0 -8.7 -9.9 30 30 A T T 3 S+ 0 0 126 1,-0.1 -1,-0.3 5,-0.1 5,-0.1 0.835 99.7 173.7 46.6 36.9 -9.7 -8.2 -12.6 31 31 A D < - 0 0 50 -3,-2.5 -1,-0.1 3,-0.3 -3,-0.1 -0.303 35.2-148.3 -72.2 158.2 -11.9 -6.9 -9.7 32 32 A L S S+ 0 0 173 -3,-0.1 -1,-0.1 3,-0.0 3,-0.1 0.686 92.4 45.5 -98.7 -24.8 -15.3 -5.5 -10.4 33 33 A D S S+ 0 0 89 1,-0.2 2,-0.5 2,-0.1 -5,-0.0 0.965 116.1 32.4 -80.7 -74.8 -15.3 -3.0 -7.5 34 34 A N + 0 0 8 1,-0.2 -3,-0.3 2,-0.1 -1,-0.2 -0.749 60.2 143.8 -90.4 128.5 -11.9 -1.3 -7.6 35 35 A E S S+ 0 0 142 -2,-0.5 -1,-0.2 -3,-0.1 -5,-0.1 0.590 80.6 26.4-128.9 -39.7 -10.3 -0.8 -11.0 36 36 A S S > S+ 0 0 63 2,-0.1 3,-1.7 1,-0.1 4,-0.3 0.700 108.6 71.4 -99.5 -26.5 -8.5 2.5 -10.9 37 37 A L T >> S+ 0 0 15 1,-0.3 3,-2.6 2,-0.2 4,-0.8 0.862 84.1 70.6 -57.7 -37.2 -7.9 2.6 -7.1 38 38 A K H 3> S+ 0 0 21 1,-0.3 4,-3.1 2,-0.2 5,-0.4 0.783 80.6 77.1 -51.1 -27.9 -5.3 -0.1 -7.5 39 39 A K H <> S+ 0 0 117 -3,-1.7 4,-2.2 1,-0.2 -1,-0.3 0.839 94.2 49.9 -52.3 -34.9 -3.2 2.6 -9.2 40 40 A V H <> S+ 0 0 8 -3,-2.6 4,-3.1 -4,-0.3 5,-0.4 0.987 113.4 40.8 -68.5 -61.7 -2.5 3.9 -5.7 41 41 A L H X S+ 0 0 8 -4,-0.8 4,-2.8 1,-0.2 -2,-0.2 0.930 120.0 46.3 -52.6 -50.8 -1.4 0.6 -4.1 42 42 A E H X S+ 0 0 94 -4,-3.1 4,-1.6 2,-0.2 -1,-0.2 0.963 117.1 42.7 -57.4 -56.2 0.5 -0.5 -7.1 43 43 A N H >X S+ 0 0 91 -4,-2.2 4,-1.2 -5,-0.4 3,-1.1 0.974 117.9 44.0 -54.7 -61.9 2.2 2.9 -7.6 44 44 A Y H >X S+ 0 0 30 -4,-3.1 4,-1.2 1,-0.3 3,-0.6 0.878 108.8 60.0 -51.8 -41.3 3.0 3.4 -3.9 45 45 A L H 3X S+ 0 0 25 -4,-2.8 4,-0.6 -5,-0.4 -1,-0.3 0.858 101.1 54.5 -56.3 -37.0 4.1 -0.2 -3.7 46 46 A E H XX S+ 0 0 127 -4,-1.6 4,-0.9 -3,-1.1 3,-0.9 0.827 97.3 65.8 -67.0 -32.1 6.8 0.6 -6.3 47 47 A E H X< S+ 0 0 85 -4,-1.2 3,-1.6 -3,-0.6 5,-0.2 0.929 94.0 57.1 -55.2 -49.1 8.1 3.4 -4.2 48 48 A L H 3< S+ 0 0 14 -4,-1.2 -1,-0.3 1,-0.3 -2,-0.2 0.792 98.6 63.6 -53.6 -28.6 9.3 1.0 -1.5 49 49 A K H << S+ 0 0 65 -3,-0.9 -1,-0.3 -4,-0.6 -2,-0.2 0.853 91.9 77.6 -65.2 -35.2 11.3 -0.7 -4.2 50 50 A Q S << S- 0 0 100 -3,-1.6 0, 0.0 -4,-0.9 0, 0.0 -0.442 74.4-144.0 -76.8 150.1 13.4 2.5 -4.6 51 51 A K S S+ 0 0 202 -2,-0.1 -1,-0.1 1,-0.1 -3,-0.1 0.273 88.8 73.3 -95.5 9.9 16.1 3.4 -2.1 52 52 A S S S+ 0 0 109 -5,-0.2 2,-0.1 1,-0.1 -1,-0.1 0.952 88.6 49.7 -85.0 -70.8 15.3 7.1 -2.4 53 53 A A S S- 0 0 32 -6,-0.2 2,-0.1 1,-0.1 -1,-0.1 -0.454 91.1-112.2 -73.0 142.8 12.0 7.6 -0.5 54 54 A S > - 0 0 66 -2,-0.1 4,-1.6 1,-0.1 3,-0.3 -0.457 18.4-123.4 -75.8 146.6 11.7 6.1 3.0 55 55 A V H >> S+ 0 0 17 1,-0.3 4,-2.3 2,-0.2 3,-0.8 0.955 115.3 38.4 -51.6 -57.5 9.3 3.3 3.6 56 56 A P H 3> S+ 0 0 37 0, 0.0 4,-0.9 0, 0.0 38,-0.3 0.641 110.9 63.6 -69.8 -14.5 7.4 5.1 6.3 57 57 A L H 34 S+ 0 0 82 -3,-0.3 4,-0.5 2,-0.2 -2,-0.2 0.771 111.0 34.9 -80.4 -27.8 7.8 8.3 4.3 58 58 A I H S+ 0 0 127 -4,-0.5 4,-1.5 -3,-0.3 -1,-0.2 0.800 103.3 70.0 -71.4 -29.5 1.1 9.6 2.0 62 62 A M H >X S+ 0 0 1 -4,-1.8 4,-3.3 1,-0.2 3,-1.0 0.952 98.3 47.2 -52.2 -56.8 -0.6 6.4 0.9 63 63 A N H 3X S+ 0 0 15 -4,-1.6 4,-2.3 1,-0.3 -1,-0.2 0.885 113.4 49.2 -53.5 -41.6 -3.3 6.6 3.5 64 64 A L H 3X S+ 0 0 81 -4,-1.0 4,-0.7 -5,-0.2 -1,-0.3 0.714 114.8 46.9 -71.5 -20.5 -3.9 10.3 2.5 65 65 A D H X S+ 0 0 46 -4,-2.3 3,-1.1 -5,-0.3 4,-0.8 0.914 108.4 45.8 -49.9 -49.2 -8.6 8.0 1.6 68 68 A K H 3X S+ 0 0 120 -4,-0.7 4,-1.2 1,-0.3 -1,-0.3 0.832 105.8 60.9 -64.6 -32.6 -9.2 10.8 -0.9 69 69 A A H 3X S+ 0 0 11 -4,-1.3 4,-1.6 -3,-0.2 6,-0.5 0.697 95.1 68.1 -67.7 -18.6 -9.8 8.2 -3.6 70 70 A I H S+ 0 0 58 -3,-1.1 5,-2.1 -4,-1.0 4,-0.6 1.000 105.1 33.8 -63.6 -71.0 -12.7 6.9 -1.6 71 71 A R H <5S+ 0 0 202 -4,-0.8 -1,-0.2 3,-0.2 3,-0.2 0.769 112.3 71.4 -57.0 -25.6 -15.1 9.8 -1.8 72 72 A N H <5S+ 0 0 97 -4,-1.2 -2,-0.2 1,-0.2 -1,-0.2 0.985 121.7 5.4 -53.8 -74.9 -13.7 10.3 -5.3 73 73 A D H <5S- 0 0 122 -4,-1.6 -1,-0.2 -3,-0.0 -2,-0.2 0.018 108.6-105.7-100.8 26.0 -15.2 7.2 -7.1 74 74 A G T <5 + 0 0 55 -4,-0.6 -3,-0.2 -3,-0.2 -4,-0.2 0.902 58.6 178.9 51.5 46.3 -17.2 6.3 -4.0 75 75 A V < - 0 0 10 -5,-2.1 2,-0.4 -6,-0.5 -1,-0.1 -0.459 15.7-159.7 -79.7 151.9 -14.9 3.4 -3.3 76 76 A T - 0 0 104 -2,-0.1 2,-0.3 -5,-0.0 -42,-0.1 -0.950 11.0-139.1-138.5 116.5 -15.4 1.1 -0.3 77 77 A L - 0 0 39 -2,-0.4 -7,-0.0 1,-0.1 -2,-0.0 -0.538 25.0-125.9 -75.0 133.6 -12.7 -1.0 1.3 78 78 A S > - 0 0 53 -2,-0.3 4,-2.8 1,-0.0 5,-0.4 -0.051 33.6 -89.3 -69.2 176.9 -13.8 -4.5 2.4 79 79 A D H > S+ 0 0 131 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.969 129.9 40.0 -51.9 -63.3 -13.3 -5.9 5.9 80 80 A Y H > S+ 0 0 103 2,-0.2 4,-3.3 1,-0.2 -1,-0.2 0.866 115.5 56.3 -55.7 -38.2 -9.9 -7.4 5.2 81 81 A Q H > S+ 0 0 7 2,-0.2 4,-1.6 1,-0.2 -2,-0.2 0.990 109.0 41.1 -57.5 -67.4 -9.0 -4.3 3.2 82 82 A S H X S+ 0 0 64 -4,-2.8 4,-0.7 1,-0.2 -1,-0.2 0.835 117.2 53.3 -50.8 -35.1 -9.7 -1.7 5.9 83 83 A K H >< S+ 0 0 152 -4,-2.2 3,-1.5 -5,-0.4 4,-0.3 0.962 106.1 48.7 -66.1 -53.4 -8.0 -4.1 8.3 84 84 A K H >X S+ 0 0 23 -4,-3.3 3,-1.0 1,-0.3 4,-0.6 0.725 101.5 69.2 -59.7 -20.5 -4.8 -4.6 6.3 85 85 A L H 3X S+ 0 0 29 -4,-1.6 4,-0.6 1,-0.3 -1,-0.3 0.842 90.3 58.8 -67.0 -34.0 -4.8 -0.8 6.1 86 86 A K H S+ 0 0 86 -3,-1.0 4,-1.3 -4,-0.3 3,-0.9 0.992 102.3 24.9 -58.4 -78.5 -0.9 -2.6 9.1 88 88 A L H 3X S+ 0 0 0 -4,-0.6 4,-2.1 1,-0.2 -1,-0.2 0.596 113.4 77.5 -64.3 -9.0 1.5 0.1 7.8 89 89 A T H 3< S+ 0 0 43 -4,-0.6 -1,-0.2 2,-0.2 -2,-0.2 0.936 100.2 35.2 -66.5 -48.0 -0.6 2.5 9.8 90 90 A S H << S+ 0 0 97 -4,-1.6 -2,-0.2 -3,-0.9 -1,-0.2 0.808 118.2 53.6 -76.0 -30.9 0.9 1.5 13.2 91 91 A I H < S+ 0 0 56 -4,-1.3 -2,-0.2 -5,-0.2 2,-0.2 0.855 93.6 84.5 -71.5 -36.0 4.4 0.9 11.6 92 92 A S < - 0 0 6 -4,-2.1 3,-0.1 -5,-0.1 -35,-0.1 -0.474 68.7-151.3 -71.2 136.1 4.4 4.4 10.1 93 93 A N S S+ 0 0 137 1,-0.2 2,-2.1 -2,-0.2 3,-0.5 0.776 84.4 80.1 -77.0 -27.7 5.6 7.2 12.4 94 94 A I + 0 0 39 -38,-0.3 4,-0.2 1,-0.2 -1,-0.2 -0.465 51.6 127.2 -80.8 69.6 3.4 9.8 10.6 95 95 A R > + 0 0 191 -2,-2.1 3,-0.6 2,-0.1 -1,-0.2 0.711 63.5 61.8 -95.4 -26.2 0.2 8.8 12.3 96 96 A Y T 3 S+ 0 0 178 -3,-0.5 -1,-0.1 1,-0.2 -2,-0.1 0.838 89.6 70.4 -68.8 -33.6 -0.6 12.4 13.5 97 97 A G T 3 0 0 43 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.838 360.0 360.0 -52.3 -35.4 -0.9 13.6 9.9 98 98 A Y < 0 0 172 -3,-0.6 -3,-0.0 -4,-0.2 -34,-0.0 -0.306 360.0 360.0 -66.9 360.0 -4.1 11.5 9.5