==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 23-APR-08 2K38 . COMPND 2 MOLECULE: CUPIENNIN-1A; . SOURCE 2 ORGANISM_SCIENTIFIC: CUPIENNIUS SALEI; . AUTHOR T.L.PUKALA,M.P.BOLAND,J.D.GEHMAN,L.KUHN-NENTWIG,F.SEPAROVIC, . 35 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4004.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 54.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 17.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-1.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -38.3 -23.2 12.0 -1.2 2 2 A F > + 0 0 170 1,-0.2 3,-0.8 2,-0.1 4,-0.1 -0.637 360.0 151.2 -98.1 75.9 -21.5 8.6 -1.9 3 3 A G T 3 + 0 0 51 -2,-1.1 3,-0.2 1,-0.2 -1,-0.2 0.165 55.3 84.1 -90.2 19.1 -21.0 7.4 1.7 4 4 A A T >> S+ 0 0 43 1,-0.2 3,-0.7 2,-0.1 4,-0.6 0.521 74.0 70.6 -95.8 -8.8 -21.2 3.8 0.5 5 5 A L H <> S+ 0 0 53 -3,-0.8 4,-2.2 1,-0.2 5,-0.2 0.606 81.8 73.3 -82.6 -12.5 -17.5 3.6 -0.5 6 6 A F H 34 S+ 0 0 166 1,-0.2 -1,-0.2 -3,-0.2 -2,-0.1 0.605 110.7 30.2 -75.4 -10.9 -16.5 3.7 3.1 7 7 A K H <4 S+ 0 0 161 -3,-0.7 -1,-0.2 2,-0.1 -2,-0.2 0.453 121.5 51.1-121.0 -11.9 -17.7 0.1 3.3 8 8 A F H >< S+ 0 0 112 -4,-0.6 3,-0.8 2,-0.1 4,-0.2 0.742 106.9 51.9 -96.8 -30.3 -17.0 -0.9 -0.3 9 9 A L G >X>S+ 0 0 61 -4,-2.2 4,-1.9 1,-0.2 5,-1.2 0.691 93.8 73.2 -79.1 -19.4 -13.4 0.2 -0.4 10 10 A A G 345S+ 0 0 62 1,-0.3 -1,-0.2 -5,-0.2 -2,-0.1 0.639 100.4 46.6 -68.3 -12.2 -12.6 -1.7 2.8 11 11 A K G <45S+ 0 0 158 -3,-0.8 -1,-0.3 2,-0.1 -2,-0.2 0.530 127.5 25.8-102.8 -12.9 -12.9 -4.8 0.6 12 12 A K T X>5S+ 0 0 127 -3,-0.7 3,-1.5 -4,-0.2 4,-1.2 0.749 124.2 42.7-112.4 -63.3 -10.7 -3.3 -2.2 13 13 A V H 3X5S+ 0 0 93 -4,-1.9 4,-0.6 1,-0.3 -3,-0.2 0.825 120.5 47.8 -56.0 -32.3 -8.4 -0.7 -0.6 14 14 A A H 34X S+ 0 0 95 -4,-1.2 4,-1.4 1,-0.2 3,-0.7 0.838 113.8 56.2 -79.4 -35.4 -4.1 -5.5 -2.1 17 17 A V T 3< S+ 0 0 72 -4,-0.6 6,-0.2 -5,-0.3 -1,-0.2 0.833 96.1 66.0 -65.4 -32.9 -2.2 -3.7 0.6 18 18 A A T 34 S+ 0 0 82 1,-0.2 3,-0.3 2,-0.1 -1,-0.2 0.818 108.7 39.0 -58.5 -31.6 -2.6 -6.7 2.9 19 19 A K T <4 S+ 0 0 183 -3,-0.7 2,-0.6 -4,-0.4 -1,-0.2 0.733 113.1 57.1 -89.6 -26.4 -0.3 -8.6 0.5 20 20 A Q >< + 0 0 95 -4,-1.4 3,-0.7 1,-0.2 -1,-0.2 -0.452 60.6 133.9-103.3 58.4 2.0 -5.7 -0.1 21 21 A A T 3 S+ 0 0 86 -2,-0.6 -1,-0.2 -3,-0.3 -3,-0.1 0.467 76.8 47.8 -83.9 -2.2 3.0 -5.0 3.5 22 22 A A T 3> S+ 0 0 80 -3,-0.2 4,-0.6 2,-0.1 -1,-0.2 0.214 76.8 102.8-120.0 10.7 6.6 -4.8 2.3 23 23 A K T <4 S+ 0 0 101 -3,-0.7 -2,-0.1 1,-0.2 -1,-0.1 0.763 103.6 19.2 -65.1 -24.7 6.1 -2.4 -0.6 24 24 A Q T 4 S+ 0 0 151 -4,-0.2 3,-0.4 -3,-0.1 -1,-0.2 0.216 100.4 95.2-127.9 9.8 7.4 0.4 1.6 25 25 A G T 4 S+ 0 0 63 1,-0.3 2,-0.3 -3,-0.1 -2,-0.1 0.761 99.1 24.0 -73.6 -24.9 9.2 -1.6 4.2 26 26 A A S < S+ 0 0 56 -4,-0.6 -1,-0.3 1,-0.1 -4,-0.0 -0.740 83.5 103.5-145.2 92.1 12.5 -1.3 2.4 27 27 A K S > S+ 0 0 130 -3,-0.4 4,-0.6 -2,-0.3 -2,-0.1 0.516 80.6 49.7-136.7 -33.9 12.9 1.7 0.0 28 28 A Y T 4 S+ 0 0 209 -4,-0.2 -2,-0.0 1,-0.1 -3,-0.0 0.339 121.5 37.3 -92.7 5.5 15.1 4.2 1.8 29 29 A V T > S+ 0 0 86 3,-0.1 4,-1.8 2,-0.1 -1,-0.1 0.528 102.0 68.7-126.7 -22.0 17.7 1.5 2.6 30 30 A V T 4 S+ 0 0 90 1,-0.2 4,-0.4 2,-0.2 -2,-0.1 0.835 111.5 35.1 -69.2 -33.1 17.6 -0.6 -0.5 31 31 A N T X S+ 0 0 123 -4,-0.6 4,-0.9 2,-0.2 -1,-0.2 0.659 114.3 58.8 -92.8 -20.3 19.2 2.2 -2.5 32 32 A K T 4 S+ 0 0 156 1,-0.2 -2,-0.2 2,-0.2 -1,-0.1 0.816 99.3 57.3 -77.3 -32.7 21.4 3.3 0.4 33 33 A Q T < S+ 0 0 182 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.813 102.2 56.4 -67.5 -30.4 23.1 -0.1 0.8 34 34 A M T 4 0 0 168 -4,-0.4 -1,-0.2 1,-0.2 -2,-0.2 0.865 360.0 360.0 -69.1 -37.0 24.2 0.2 -2.9 35 35 A E < 0 0 200 -4,-0.9 -1,-0.2 -3,-0.1 -2,-0.2 0.917 360.0 360.0 -61.6 360.0 26.0 3.5 -2.2